; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0019527 (gene) of Chayote v1 genome

Gene IDSed0019527
OrganismSechium edule (Chayote v1)
DescriptionE3 ubiquitin-protein ligase RMA1H1-like
Genome locationLG01:15719773..15720420
RNA-Seq ExpressionSed0019527
SyntenySed0019527
Gene Ontology termsGO:0006511 - ubiquitin-dependent protein catabolic process (biological process)
GO:0016567 - protein ubiquitination (biological process)
GO:0071712 - ER-associated misfolded protein catabolic process (biological process)
GO:0005783 - endoplasmic reticulum (cellular component)
GO:0044390 - ubiquitin-like protein conjugating enzyme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type
IPR017907 - Zinc finger, RING-type, conserved site
IPR018957 - Zinc finger, C3HC4 RING-type
IPR045103 - E3 ubiquitin-protein ligase RNF5/RNF185-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6584000.1 E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. sororia]1.4e-8172.6Show/hide
Query:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI
        KFKACFDCNICL+FA EPIVTLCGHLYCWPCIYKWL V SASL P+EPPQCPVCK+DI+HTTM+PLYGRGQSA++AEVD +GLLIPPRPSA G K LA I
Subjt:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI

Query:  RSDNA------YGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS
         S+NA      YGDLYQN+N N D YDSY  +EDSSSS FN+E NPV SF HPTARMFGE VYGRLFG SENLY  PNSYALTG+ SP+ R    + E+S
Subjt:  RSDNA------YGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS

Query:  LKRMSLCLFYFFVVCLALF
        L R+S+ LF  FV+CLA+F
Subjt:  LKRMSLCLFYFFVVCLALF

KAG7019622.1 E3 ubiquitin-protein ligase RMA1H1, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-8172.6Show/hide
Query:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI
        KFKACFDCNICL+FA EPIVTLCGHLYCWPCIYKWL V SASL P+EPPQCPVCK+DI+HTTM+PLYGRGQSA++AEVD +GLLIPPRPSA G K LA I
Subjt:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI

Query:  RSDNA------YGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS
         S+NA      YGDLYQN+N N D YDSY  +EDSSSS FN+E NPV SF HPTARMFGE VYGRLFG SENLY  PNSYALTG+ SP+ R    + E+S
Subjt:  RSDNA------YGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS

Query:  LKRMSLCLFYFFVVCLALF
        L R+S+ LF  FV+CLA+F
Subjt:  LKRMSLCLFYFFVVCLALF

XP_008442466.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Cucumis melo]2.8e-8272.15Show/hide
Query:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI
        KFK CFDCNICLDFA EPIVTLCGHLYCWPCIYKWL V SASLAP+EPPQCPVCK+DI+HTTM+PLYGRGQSAE AE DA+G LIPPRPSAFG K LA I
Subjt:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI

Query:  RSDN------AYGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMF-GEVYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS
        RS+N      AYGDL QN+NYN D YDSY  +EDS SS F+LE NPV S HHPTA +  G VYGRL+GDSEN+Y  PNSY L+G+NSPR RR+E +AE+S
Subjt:  RSDN------AYGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMF-GEVYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS

Query:  LKRMSLCLFYFFVVCLALF
        L R+S  LF  F++CLA+F
Subjt:  LKRMSLCLFYFFVVCLALF

XP_023519102.1 E3 ubiquitin-protein ligase RMA1H1-like [Cucurbita pepo subsp. pepo]2.8e-8273.06Show/hide
Query:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI
        KFKACFDCNICL+FA EPIVTLCGHLYCWPCIYKWL V SASL P+EPPQCPVCK+DI+HTTM+PLYGRGQSA++AEVD +GLLIPPRPSAFG K LA I
Subjt:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI

Query:  RSDNA------YGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS
         S+NA      YGDLYQN+N N D YDSY  +EDSSSS FN+E NPV SF HPTARMFGE VYGRLFG SENLY  PNSYALTG+ SP+ R    + E+S
Subjt:  RSDNA------YGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS

Query:  LKRMSLCLFYFFVVCLALF
        L R+S+ LF  FV+CLA+F
Subjt:  LKRMSLCLFYFFVVCLALF

XP_038895713.1 E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida]1.8e-8171.69Show/hide
Query:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI
        KFK CFDCNICLDFA EPIVTLCGHLYCWPCIYKWL V SASL P+EPPQCPVCK++I+HTTM+PLYGRGQSAEDAEVDA+GLLIPPRPSAFG K LA I
Subjt:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI

Query:  RSDN------AYGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS
        RS+       AYGDLYQN+ YN D YDSY  +EDSSSS FNLE + V S HHPTA MF E VY R FG+SEN+Y  P+SY  +GN+SPR RR+E LAE+S
Subjt:  RSDN------AYGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS

Query:  LKRMSLCLFYFFVVCLALF
        L R+S+ LF  FV+CL +F
Subjt:  LKRMSLCLFYFFVVCLALF

TrEMBL top hitse value%identityAlignment
A0A0A0LUK5 RING-type domain-containing protein2.5e-8170.78Show/hide
Query:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI
        KFK CFDCNICLDFA +PIVTLCGHLYCWPCIYKWL V SASLAP+EPPQCPVCK++I+HTTM+PLYGRGQSAE AEVDA+G+LIPPRPSAFG K LA I
Subjt:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI

Query:  RSDN------AYGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS
        RS+N      AYGDL QN+NYN D YDSY  +EDS SS F+LE NPV S HHPTA M GE VYGR + DSEN+Y  PNSY L+G+NSPR RR+E +AE+S
Subjt:  RSDN------AYGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS

Query:  LKRMSLCLFYFFVVCLALF
        L ++   LF  F++CLA+F
Subjt:  LKRMSLCLFYFFVVCLALF

A0A1S3B6D8 E3 ubiquitin-protein ligase RMA1H1-like1.3e-8272.15Show/hide
Query:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI
        KFK CFDCNICLDFA EPIVTLCGHLYCWPCIYKWL V SASLAP+EPPQCPVCK+DI+HTTM+PLYGRGQSAE AE DA+G LIPPRPSAFG K LA I
Subjt:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI

Query:  RSDN------AYGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMF-GEVYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS
        RS+N      AYGDL QN+NYN D YDSY  +EDS SS F+LE NPV S HHPTA +  G VYGRL+GDSEN+Y  PNSY L+G+NSPR RR+E +AE+S
Subjt:  RSDN------AYGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMF-GEVYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS

Query:  LKRMSLCLFYFFVVCLALF
        L R+S  LF  F++CLA+F
Subjt:  LKRMSLCLFYFFVVCLALF

A0A5A7UTV8 E3 ubiquitin-protein ligase RMA1H1-like1.3e-8272.15Show/hide
Query:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI
        KFK CFDCNICLDFA EPIVTLCGHLYCWPCIYKWL V SASLAP+EPPQCPVCK+DI+HTTM+PLYGRGQSAE AE DA+G LIPPRPSAFG K LA I
Subjt:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI

Query:  RSDN------AYGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMF-GEVYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS
        RS+N      AYGDL QN+NYN D YDSY  +EDS SS F+LE NPV S HHPTA +  G VYGRL+GDSEN+Y  PNSY L+G+NSPR RR+E +AE+S
Subjt:  RSDN------AYGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMF-GEVYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS

Query:  LKRMSLCLFYFFVVCLALF
        L R+S  LF  F++CLA+F
Subjt:  LKRMSLCLFYFFVVCLALF

A0A6J1CFW3 E3 ubiquitin-protein ligase RMA1H1-like1.4e-7971.1Show/hide
Query:  FKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPIR
        FKACFDC+ICLDFA EPIVTLCGHLYCWPCIYKWL V SASL P+EPPQCPVCK+DI+HTTMIPLYG GQSAED EVDAK LLIPPRPSAFG K L  IR
Subjt:  FKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPIR

Query:  SDNA------YGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQSL
        S+NA      Y + YQN++YN D YDSY  +EDSSSS FNLEH+P +SFHHP ARMFGE VY R+FG+SE LY  PNSY  TG++SPR RR+E LAE+SL
Subjt:  SDNA------YGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQSL

Query:  KRMSLCLFYFFVVCLALF
         R+S  LF   V+ L +F
Subjt:  KRMSLCLFYFFVVCLALF

A0A6J1EJS4 E3 ubiquitin-protein ligase RMA1H1-like1.1e-8172.15Show/hide
Query:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI
        KFKACFDCNICL+FA EPIVTLCGHLYCWPCIYKWL + SASL P+EPPQCPVCK+DI+HTTM+PLYGR QSA++AEVD +GLLIPPRPSAFG K LA I
Subjt:  KFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPI

Query:  RSDNA------YGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS
         S+NA      YGDLYQN+N N D YDSY  +EDSSSS FN+E NPV SF HPTARMFGE VYGRLFG SENLY  PNSYALTG+ SP+ R    + E+S
Subjt:  RSDNA------YGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQS

Query:  LKRMSLCLFYFFVVCLALF
        L R+S+ LF  FV+CLA+F
Subjt:  LKRMSLCLFYFFVVCLALF

SwissProt top hitse value%identityAlignment
O64425 E3 ubiquitin-protein ligase RMA11.6e-2740.57Show/hide
Query:  FDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPE--EPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPIRSD
        FDCNICLD   EP+VTLCGHL+CWPCI+KWL V S S + E     QCPVCKS ++H+T++PLYGRG+     E       +P RP       L    S 
Subjt:  FDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPE--EPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPIRSD

Query:  NAYGD--LYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDS-ENLYVRPNSYALTGNNSPRSRRRETLAEQSLKRMSL
         A  D  L Q  ++N  +   Y      SS+S +      ++   P   M GE V  RLFG    + +  P++Y L G + PR RRR   A++SL R   
Subjt:  NAYGD--LYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDS-ENLYVRPNSYALTGNNSPRSRRRETLAEQSLKRMSL

Query:  CLFYFFVVCLAL
         +F+FF+ C+ L
Subjt:  CLFYFFVVCLAL

P93030 E3 ubiquitin-protein ligase RMA23.0e-2336.92Show/hide
Query:  FDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLA-------PEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLA
        FDCNICLD   +P+VTLCGHL+CWPCI+KW    + S           EPP+CPVCKSD++  T++P+YGRGQ A  +     G  +P RP+        
Subjt:  FDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLA-------PEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLA

Query:  PIRSDNAYGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGEVYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQSLKRMS
                G +Y      D R       E  S        +PV         +   VY RLFG+S       ++ A   + + RSRRR   AE+SL R+ 
Subjt:  PIRSDNAYGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGEVYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQSLKRMS

Query:  LCLFYFFVVCLALF
        L L  F  +CL LF
Subjt:  LCLFYFFVVCLALF

Q6R567 E3 ubiquitin-protein ligase RMA1H11.0e-3444.04Show/hide
Query:  FDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASL--APEEPPQCPVCKSDINHTTMIPLYGR-GQSAEDAEVDAK--GLLIPPRPSA--FGTKDLA
        FDCNICLD   EP++TLCGHLYCWPCIYKW+   S S   + ++ PQCPVCK++++  T+IPLYGR GQS + +E  A   G++IP RP +   G   L 
Subjt:  FDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASL--APEEPPQCPVCKSDINHTTMIPLYGR-GQSAEDAEVDAK--GLLIPPRPSA--FGTKDLA

Query:  PIRSDNAYGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHN--PVNSFHHPTARMFGEV-YGRLFGDSE-NLYVRPNSYALTGNNSPRSRRRETLAEQSL
        P    N    L Q   Y           + S  SS  L       N   H    M GEV Y R+FG+S   +Y  PNSY L  ++SPR RR+ + A++SL
Subjt:  PIRSDNAYGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHN--PVNSFHHPTARMFGEV-YGRLFGDSE-NLYVRPNSYALTGNNSPRSRRRETLAEQSL

Query:  KRMSLCLFYFFVVCLALF
         R+   LF  FV CL LF
Subjt:  KRMSLCLFYFFVVCLALF

Q8GUK7 E3 ubiquitin-protein ligase RMA36.3e-2937.96Show/hide
Query:  CFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEE-PPQCPVCKSDINHTTMIPLYGRGQSAEDA-----EVDAKGLLIPPRPSAFGTKDLA
        CFDCNICLD A +P+VTLCGHL+CWPCIYKWL V  +S++ ++    CPVCKS+I  T+++PLYGRG S+  +     + DA    IP RP+    ++  
Subjt:  CFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEE-PPQCPVCKSDINHTTMIPLYGRGQSAEDA-----EVDAKGLLIPPRPSAFGTKDLA

Query:  PIRSDNAYGDLYQNENYNDDRYD-SYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQSLKR
        PI S ++     Q++  +   ++  Y     +++ S +L +  + SF +P   MFG+ VY R+FG   N   +P         S R  +R    E+SL R
Subjt:  PIRSDNAYGDLYQNENYNDDRYD-SYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQSLKR

Query:  MSLCLFYFFVVCLALF
        +S+      ++CL LF
Subjt:  MSLCLFYFFVVCLALF

Q99942 E3 ubiquitin-protein ligase RNF55.5e-1747.13Show/hide
Query:  ACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRG-QSAEDAEVDAKGLLIPPRP
        A F+CNICL+ A E +V++CGHLYCWPC+++WL          E  +CPVCK+ I+   ++PLYGRG Q  +D       L  PPRP
Subjt:  ACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRG-QSAEDAEVDAKGLLIPPRP

Arabidopsis top hitse value%identityAlignment
AT1G19310.1 RING/U-box superfamily protein8.2e-2455.81Show/hide
Query:  FDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDA-KGLLIPPRPS
        F+CNICLD A +PIVTLCGHL+CWPC+YKWL +HS S        CPVCK+ I    ++PLYGRG+S+ D    +  GL +P RPS
Subjt:  FDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDA-KGLLIPPRPS

AT4G03510.1 RING membrane-anchor 11.1e-2840.57Show/hide
Query:  FDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPE--EPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPIRSD
        FDCNICLD   EP+VTLCGHL+CWPCI+KWL V S S + E     QCPVCKS ++H+T++PLYGRG+     E       +P RP       L    S 
Subjt:  FDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPE--EPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPIRSD

Query:  NAYGD--LYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDS-ENLYVRPNSYALTGNNSPRSRRRETLAEQSLKRMSL
         A  D  L Q  ++N  +   Y      SS+S +      ++   P   M GE V  RLFG    + +  P++Y L G + PR RRR   A++SL R   
Subjt:  NAYGD--LYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDS-ENLYVRPNSYALTGNNSPRSRRRETLAEQSLKRMSL

Query:  CLFYFFVVCLAL
         +F+FF+ C+ L
Subjt:  CLFYFFVVCLAL

AT4G03510.2 RING membrane-anchor 11.1e-2840.57Show/hide
Query:  FDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPE--EPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPIRSD
        FDCNICLD   EP+VTLCGHL+CWPCI+KWL V S S + E     QCPVCKS ++H+T++PLYGRG+     E       +P RP       L    S 
Subjt:  FDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPE--EPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPIRSD

Query:  NAYGD--LYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDS-ENLYVRPNSYALTGNNSPRSRRRETLAEQSLKRMSL
         A  D  L Q  ++N  +   Y      SS+S +      ++   P   M GE V  RLFG    + +  P++Y L G + PR RRR   A++SL R   
Subjt:  NAYGD--LYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDS-ENLYVRPNSYALTGNNSPRSRRRETLAEQSLKRMSL

Query:  CLFYFFVVCLAL
         +F+FF+ C+ L
Subjt:  CLFYFFVVCLAL

AT4G27470.1 RING membrane-anchor 34.5e-3037.96Show/hide
Query:  CFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEE-PPQCPVCKSDINHTTMIPLYGRGQSAEDA-----EVDAKGLLIPPRPSAFGTKDLA
        CFDCNICLD A +P+VTLCGHL+CWPCIYKWL V  +S++ ++    CPVCKS+I  T+++PLYGRG S+  +     + DA    IP RP+    ++  
Subjt:  CFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEE-PPQCPVCKSDINHTTMIPLYGRGQSAEDA-----EVDAKGLLIPPRPSAFGTKDLA

Query:  PIRSDNAYGDLYQNENYNDDRYD-SYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQSLKR
        PI S ++     Q++  +   ++  Y     +++ S +L +  + SF +P   MFG+ VY R+FG   N   +P         S R  +R    E+SL R
Subjt:  PIRSDNAYGDLYQNENYNDDRYD-SYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGE-VYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQSLKR

Query:  MSLCLFYFFVVCLALF
        +S+      ++CL LF
Subjt:  MSLCLFYFFVVCLALF

AT4G28270.1 RING membrane-anchor 22.2e-2436.92Show/hide
Query:  FDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLA-------PEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLA
        FDCNICLD   +P+VTLCGHL+CWPCI+KW    + S           EPP+CPVCKSD++  T++P+YGRGQ A  +     G  +P RP+        
Subjt:  FDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLA-------PEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLA

Query:  PIRSDNAYGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGEVYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQSLKRMS
                G +Y      D R       E  S        +PV         +   VY RLFG+S       ++ A   + + RSRRR   AE+SL R+ 
Subjt:  PIRSDNAYGDLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGEVYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQSLKRMS

Query:  LCLFYFFVVCLALF
        L L  F  +CL LF
Subjt:  LCLFYFFVVCLALF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTCAAGTTTAAGGCCTGCTTCGACTGCAACATTTGCCTAGATTTTGCATTTGAGCCTATAGTTACCCTGTGTGGCCACCTCTATTGCTGGCCTTGCATATACAA
GTGGCTTCGTGTCCACAGCGCCTCACTCGCCCCCGAAGAGCCTCCACAGTGCCCAGTTTGCAAGTCCGATATTAACCATACGACAATGATCCCTCTCTATGGCCGTGGTC
AATCAGCGGAAGATGCTGAGGTTGATGCCAAAGGGCTGCTCATACCTCCTCGACCATCAGCTTTCGGTACTAAAGATCTGGCACCTATTAGATCTGATAATGCTTATGGT
GACCTATATCAGAATGAAAACTACAATGATGATCGGTATGACAGTTATGACGAAGACGAAGATTCCAGCAGCTCATCATTTAACCTCGAACACAACCCGGTCAATAGTTT
TCACCATCCTACAGCAAGGATGTTCGGGGAGGTGTATGGTAGGTTGTTTGGGGATTCAGAAAACTTATATGTACGCCCGAATTCTTATGCTCTAACTGGAAATAACAGTC
CTCGGTCGAGAAGGCGTGAAACTCTGGCCGAGCAGTCACTTAAGAGGATGTCATTATGTCTCTTCTATTTCTTTGTTGTATGCCTTGCTCTCTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCATTCAAGTTTAAGGCCTGCTTCGACTGCAACATTTGCCTAGATTTTGCATTTGAGCCTATAGTTACCCTGTGTGGCCACCTCTATTGCTGGCCTTGCATATACAA
GTGGCTTCGTGTCCACAGCGCCTCACTCGCCCCCGAAGAGCCTCCACAGTGCCCAGTTTGCAAGTCCGATATTAACCATACGACAATGATCCCTCTCTATGGCCGTGGTC
AATCAGCGGAAGATGCTGAGGTTGATGCCAAAGGGCTGCTCATACCTCCTCGACCATCAGCTTTCGGTACTAAAGATCTGGCACCTATTAGATCTGATAATGCTTATGGT
GACCTATATCAGAATGAAAACTACAATGATGATCGGTATGACAGTTATGACGAAGACGAAGATTCCAGCAGCTCATCATTTAACCTCGAACACAACCCGGTCAATAGTTT
TCACCATCCTACAGCAAGGATGTTCGGGGAGGTGTATGGTAGGTTGTTTGGGGATTCAGAAAACTTATATGTACGCCCGAATTCTTATGCTCTAACTGGAAATAACAGTC
CTCGGTCGAGAAGGCGTGAAACTCTGGCCGAGCAGTCACTTAAGAGGATGTCATTATGTCTCTTCTATTTCTTTGTTGTATGCCTTGCTCTCTTCTAG
Protein sequenceShow/hide protein sequence
MAFKFKACFDCNICLDFAFEPIVTLCGHLYCWPCIYKWLRVHSASLAPEEPPQCPVCKSDINHTTMIPLYGRGQSAEDAEVDAKGLLIPPRPSAFGTKDLAPIRSDNAYG
DLYQNENYNDDRYDSYDEDEDSSSSSFNLEHNPVNSFHHPTARMFGEVYGRLFGDSENLYVRPNSYALTGNNSPRSRRRETLAEQSLKRMSLCLFYFFVVCLALF