; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0019562 (gene) of Chayote v1 genome

Gene IDSed0019562
OrganismSechium edule (Chayote v1)
Descriptionauxin-responsive protein SAUR50-like
Genome locationLG11:26335179..26335980
RNA-Seq ExpressionSed0019562
SyntenySed0019562
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6598492.1 Auxin-responsive protein SAUR50, partial [Cucurbita argyrosperma subsp. sororia]4.3e-3882.86Show/hide
Query:  MAVVKQIMKRCSSLRTKKNHQN-----GGAG-GGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL
        MAVVKQIMKRCS LR+ KN  N     GGAG G G+IPVDVPK HFVVYVSENRSRYIVPLT LT PEFQILLQLAEEEFGF+HHMGLTIPCEEQVF SL
Subjt:  MAVVKQIMKRCSSLRTKKNHQN-----GGAG-GGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL

Query:  TSMLR
        TSMLR
Subjt:  TSMLR

XP_022962125.1 auxin-responsive protein SAUR50-like [Cucurbita moschata]1.3e-3778.38Show/hide
Query:  MAVVKQIMKRCSSLRTKKNHQN-------GGAGGG-----GDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEE
        MAVVKQIMKRCS LR+ KN  N       GG GGG     G+IPVDVPK HFVVYVSENRSRYIVPLT LT PEFQILLQLAEEEFGF+HHMGLTIPCEE
Subjt:  MAVVKQIMKRCSSLRTKKNHQN-------GGAGGG-----GDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEE

Query:  QVFLSLTSMLR
        QVF SLTSMLR
Subjt:  QVFLSLTSMLR

XP_022997035.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]9.6e-3882.69Show/hide
Query:  MAVVKQIMKRCSSLRTKKNHQN----GGAGGG--GDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL
        MAVVKQIMKRCS LR+ KN  N    GG GGG  G+IPVDVPK HFVVYVSENRSRYIVPLT LT PEFQILLQLAEEEFGF+HHMGLTIPCEEQVF SL
Subjt:  MAVVKQIMKRCSSLRTKKNHQN----GGAGGG--GDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL

Query:  TSML
        TSML
Subjt:  TSML

XP_023002557.1 auxin-responsive protein SAUR50-like [Cucurbita maxima]2.8e-3785.26Show/hide
Query:  AVVKQIMKRCSSLRTKKNHQNGGA--GGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL
        AVVKQIMKRCSSLR KK HQ GGA  GGGGDIPVDVPK HFVVYV ENRSRYIVP+TFL+ PEFQILLQLAEEEFGF+HHMGLTIPC+E+VF SL
Subjt:  AVVKQIMKRCSSLRTKKNHQNGGA--GGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL

XP_038886317.1 auxin-responsive protein SAUR50-like [Benincasa hispida]3.6e-3784.85Show/hide
Query:  AVVKQIMKRCSSLRTKKN-HQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR
        AVVKQI KRCSSLR  KN + +   GGG +IPVDVPK HFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNH+MGLTIPCEEQVF SLTSMLR
Subjt:  AVVKQIMKRCSSLRTKKN-HQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR

TrEMBL top hitse value%identityAlignment
A0A0A0LRM7 Uncharacterized protein8.8e-3779.05Show/hide
Query:  AVVKQIMKRCSSLRTKKNHQNGG-------AGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL
        AVVKQI KRCSSLR  K ++N          GGG +IPVDVPK HFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGF+H+MGLTIPCEEQVF SL
Subjt:  AVVKQIMKRCSSLRTKKNHQNGG-------AGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL

Query:  TSMLR
        TSMLR
Subjt:  TSMLR

A0A6J1GIF7 auxin-responsive protein SAUR50-like3.9e-3786.02Show/hide
Query:  AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL
        AVVKQIMKRCSSLR KK HQ GGA GGGDIPVDVPK HFVVYV ENRSRYIVP+TFL+ PEFQILLQLAEEEFGF+HHMGLTIPC+E+VF SL
Subjt:  AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL

A0A6J1HE76 auxin-responsive protein SAUR50-like6.1e-3878.38Show/hide
Query:  MAVVKQIMKRCSSLRTKKNHQN-------GGAGGG-----GDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEE
        MAVVKQIMKRCS LR+ KN  N       GG GGG     G+IPVDVPK HFVVYVSENRSRYIVPLT LT PEFQILLQLAEEEFGF+HHMGLTIPCEE
Subjt:  MAVVKQIMKRCSSLRTKKNHQN-------GGAGGG-----GDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEE

Query:  QVFLSLTSMLR
        QVF SLTSMLR
Subjt:  QVFLSLTSMLR

A0A6J1K8F3 auxin-responsive protein SAUR50-like4.6e-3882.69Show/hide
Query:  MAVVKQIMKRCSSLRTKKNHQN----GGAGGG--GDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL
        MAVVKQIMKRCS LR+ KN  N    GG GGG  G+IPVDVPK HFVVYVSENRSRYIVPLT LT PEFQILLQLAEEEFGF+HHMGLTIPCEEQVF SL
Subjt:  MAVVKQIMKRCSSLRTKKNHQN----GGAGGG--GDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL

Query:  TSML
        TSML
Subjt:  TSML

A0A6J1KJU9 auxin-responsive protein SAUR50-like1.4e-3785.26Show/hide
Query:  AVVKQIMKRCSSLRTKKNHQNGGA--GGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL
        AVVKQIMKRCSSLR KK HQ GGA  GGGGDIPVDVPK HFVVYV ENRSRYIVP+TFL+ PEFQILLQLAEEEFGF+HHMGLTIPC+E+VF SL
Subjt:  AVVKQIMKRCSSLRTKKNHQNGGA--GGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL

SwissProt top hitse value%identityAlignment
O65695 Auxin-responsive protein SAUR503.4e-3067.35Show/hide
Query:  AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR
        A++KQI+KRCSSL  K    NGG      +P+DVPK HF VYV ENRSRYIVP++FLT PEFQ LLQ AEEEFGF+H MGLTIPC+E VF +LTSM+R
Subjt:  AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR

P0DKL1 Auxin-responsive protein SAUR505.9e-2255.79Show/hide
Query:  VKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSML
        +K+I+K+CSS    KN+ + G      +P DVPK HFVVYV E R+RYIVP++ L  P FQ LLQ +EEEFGFNH MG+ IPC+E  FLS  SM+
Subjt:  VKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSML

P33080 Auxin-induced protein X10A3.5e-1453.73Show/hide
Query:  VDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHM-GLTIPCEEQVFLSLTSML
        V+VPK + VVYV +   R+++P+++L +P FQ LL  AEEEFG++H M GLTIPC+E  FL++TS L
Subjt:  VDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHM-GLTIPCEEQVFLSLTSML

P33081 Auxin-induced protein 15A1.3e-1353.03Show/hide
Query:  DVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHM-GLTIPCEEQVFLSLTSML
        D PK +  VYV E   R+++P+++L +P FQ LL  AEEEFG++H M GLTIPC E VF  +TS L
Subjt:  DVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHM-GLTIPCEEQVFLSLTSML

Q9SL45 Protein SMALL AUXIN UP-REGULATED RNA 107.9e-2762.24Show/hide
Query:  AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR
        A +KQI+KRCSSLR  KN          D+P DVPK HF VYV  NRSRYIVP+++L   EFQ LL+LAEEEFGF+H MGLTIPC+E  F SL SM R
Subjt:  AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR

Arabidopsis top hitse value%identityAlignment
AT1G19830.1 SAUR-like auxin-responsive protein family3.9e-2962Show/hide
Query:  VVKQIMKRCSSLRTKKN--HQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL-TSMLR
        ++KQI+KRCSSL  K++  + +     G  +P+DVPK HFVVYV  NR RY++P++FLTRPEFQ+LLQ AEEEFGF+H+MGLTIPCEE  F SL TSML+
Subjt:  VVKQIMKRCSSLRTKKN--HQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSL-TSMLR

AT1G75580.1 SAUR-like auxin-responsive protein family2.2e-3268.37Show/hide
Query:  AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR
        A++KQI+KRCSSL  K+++  G    G   P++VPK HFVVYV ENR RY+VP++FLTRPEFQ+LLQ AEEEFGF+H MGLTIPCEE VF SLTSMLR
Subjt:  AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR

AT2G21220.1 SAUR-like auxin-responsive protein family7.9e-3064.95Show/hide
Query:  AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSML
        A++KQI+KRCSSL   + +   G      +PVDVPK HF VYV E RSRYIVP++FLT P+F+ LLQ AEEEFGFNH MGLTIPCEE VF SLTSM+
Subjt:  AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSML

AT4G34760.1 SAUR-like auxin-responsive protein family2.4e-3167.35Show/hide
Query:  AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR
        A++KQI+KRCSSL  K    NGG      +P+DVPK HF VYV ENRSRYIVP++FLT PEFQ LLQ AEEEFGF+H MGLTIPC+E VF +LTSM+R
Subjt:  AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR

AT4G38860.1 SAUR-like auxin-responsive protein family1.7e-2965.66Show/hide
Query:  AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHM-GLTIPCEEQVFLSLTSMLR
        A++KQI+KRCSSL  K+ +   G      +P+DVPK HF VYV E R+RYIVP++FLT PEF ILLQ AEEEFGF H M GLTIPCEE VFLSLTSM+R
Subjt:  AVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHM-GLTIPCEEQVFLSLTSMLR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGGTGGTGAAGCAGATCATGAAGCGGTGTTCCTCTTTGAGGACTAAGAAGAATCACCAAAACGGCGGCGCTGGCGGCGGTGGAGATATTCCGGTGGATGTTCCAAA
ACGCCATTTTGTGGTGTATGTTAGTGAGAATCGGAGCCGCTACATTGTGCCGTTGACTTTCTTGACCAGGCCTGAATTTCAAATTCTTCTACAATTGGCTGAGGAAGAGT
TTGGATTCAACCACCATATGGGCCTTACTATCCCTTGCGAGGAGCAGGTCTTTCTGTCTTTAACTTCCATGCTTCGATGA
mRNA sequenceShow/hide mRNA sequence
TATCTCCCAAAATCATCACATTCACAAAATTCTCTTCGTTTTCATTTCTCTAAGCTCCAATGGCGGTGGTGAAGCAGATCATGAAGCGGTGTTCCTCTTTGAGGACTAAG
AAGAATCACCAAAACGGCGGCGCTGGCGGCGGTGGAGATATTCCGGTGGATGTTCCAAAACGCCATTTTGTGGTGTATGTTAGTGAGAATCGGAGCCGCTACATTGTGCC
GTTGACTTTCTTGACCAGGCCTGAATTTCAAATTCTTCTACAATTGGCTGAGGAAGAGTTTGGATTCAACCACCATATGGGCCTTACTATCCCTTGCGAGGAGCAGGTCT
TTCTGTCTTTAACTTCCATGCTTCGATGAACCGAACCAAACCGATCGAGTTCGAGCTCGTCCTGCGTAGCGGTTTAGGGTTATTGAGGTTTATATAAATATCTCCCTCTC
CCTACGGAGCTGTTTTCGGCTATTAATGCACGTCGAAACAGCATTCGAGAAATTATTAGAGAAGGCTGAAACAATGTGCTCGAGTATAGATTTCGAATCTTCGTCAAACT
AAACCAAGGCCGTGCTCGATAATTTTTCGCTTGGGGGAGCTTTTAGGGCTAGAATTCTCAAACAAACAGTACAAAATTTGTCTCCTTTTCTTTCCCAATTCGTTCTTGTT
TCATAAATCCATAATTAAGTTTTTTTTTTCTTTCCATATTTTTCTTTTAGTTAAATTATTTATTTGATTTTATGGATATGGTTGGATGGGAGGATGAAATTTGGCTTTGT
TGTTTTTTAAAAGAAAGACCAAAAAAATCAAC
Protein sequenceShow/hide protein sequence
MAVVKQIMKRCSSLRTKKNHQNGGAGGGGDIPVDVPKRHFVVYVSENRSRYIVPLTFLTRPEFQILLQLAEEEFGFNHHMGLTIPCEEQVFLSLTSMLR