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Sed0019585 (gene) of Chayote v1 genome

Gene IDSed0019585
OrganismSechium edule (Chayote v1)
DescriptionCalcium-binding EF-hand family protein
Genome locationLG13:14486922..14487194
RNA-Seq ExpressionSed0019585
SyntenySed0019585
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6591370.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2671.59Show/hide
Query:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYT
        M R +KTYQ RPK+SR+QLS+IFRNHD +GDGRL+ TELT AFRYIGA LPS RA HAL +TDSD DGFI E++FE L+ YAEKR+YT
Subjt:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYT

KAG6600743.1 Calcium-binding protein CML38, partial [Cucurbita argyrosperma subsp. sororia]2.1e-3177.78Show/hide
Query:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYTVI
        MPR TK Y QRPKISRQQL +IFRNHDR+GDGRL++ ELT+AF YIGALLPS RA HAL YTDSDRDGFIDE++FE L+ YAEKR+YTVI
Subjt:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYTVI

KAG6600744.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]6.1e-3176.67Show/hide
Query:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYTVI
        MPR TKTY  RP+ISR+QL LIFRNHD NGDGRL++ ELT+AF YIGALLPS RA HAL YTDSDRDGFIDE++FE L+ YAEKR+YTVI
Subjt:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYTVI

KAG6608481.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. sororia]9.7e-2972.22Show/hide
Query:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYTVI
        M R  K  Q RPK+SR+QLS+IFRNHD +GDGRL+ATELTEAFRYIGA LPS RA HAL YTDSDRDGFI E++FESL+ Y EKR YT++
Subjt:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYTVI

KAG7024248.1 Polcalcin Bet v 4, partial [Cucurbita argyrosperma subsp. argyrosperma]1.4e-2772.22Show/hide
Query:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYTVI
        M R +KTYQ RPK+SR+QLS+IFRNHD +GDGRL+ TELT AFRYIGA LPS RA HAL +TDSD DGFI E++FE L+ YAEKR+YTVI
Subjt:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYTVI

TrEMBL top hitse value%identityAlignment
A0A0A0KZR6 Uncharacterized protein3.7e-2667.78Show/hide
Query:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYTVI
        M R +K Y  R K+SR+QL LIFRNHD + DGRL+ TELTEAFRYIGA LP+ RARHAL + DSDRDGFI E++FESL+ YAE+R+YT+I
Subjt:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYTVI

A0A438DYH7 Uncharacterized protein1.2e-1348.78Show/hide
Query:  KTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREY
        KT   +  +  QQL  IF+ HD NGDG+LN  EL +AF+++GAL+P  RA  ALH+ D+D DG I E+E + L++YA K  Y
Subjt:  KTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREY

A0A5A7VDB9 Putative calcium-binding protein CML274.8e-2667.78Show/hide
Query:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYTVI
        M R +KTY  R ++SR+QL LIFRNHD + DGRL+ TELTEAFRYIGA LP  RARHAL + DSDRDGFI E++FE L+ YAE+R+YTVI
Subjt:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYTVI

A0A803LVB7 Uncharacterized protein1.8e-1248.15Show/hide
Query:  QQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYTV
        +++ ++S  QL  IF+ HD+NGDG L+  EL EAFR +GA +P  RA +A+HYTD D DG I+E E + L+ YA +  YT+
Subjt:  QQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYTV

A5AWP8 Uncharacterized protein1.5e-1448.81Show/hide
Query:  KTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYTV
        KT   +  +  QQL  IF+ HD NGDG+LN  EL +AF+++GAL+P  RA  ALH+ D+D DG I E+E + L++YA K  YT+
Subjt:  KTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYTV

SwissProt top hitse value%identityAlignment
O22845 Calmodulin-like protein 55.4e-0630.77Show/hide
Query:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESL
        +P  + +     +I   +L  +F+  D+NGDGR+   EL ++   +G  +P       +H  D++ DG +D  EFESL
Subjt:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESL

O81701 Polcalcin Aln g 42.0e-0538.98Show/hide
Query:  IFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLK
        IF+  D NGDG+++A+EL +A + +G++ P    +H +   D+D DGFI  QEF +  +
Subjt:  IFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLK

Q0DJV6 Probable calcium-binding protein CML182.8e-0744.83Show/hide
Query:  QLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEF
        +L  +FR +D NGDG+++A EL    R +GA L     R  +   DSDRDGF+D  EF
Subjt:  QLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEF

Q39419 Polcalcin Bet v 45.4e-0644.44Show/hide
Query:  IFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEF
        IF+  D NGDG+++A EL EA + +G++ P    +H +   D+D DGFI  QEF
Subjt:  IFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEF

Q6L4D4 Probable calcium-binding protein CML152.7e-0533.82Show/hide
Query:  RPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESL
        RP  +  +   +FR  D NGDGR++  EL   FR +G  +        +   DSD DG+I   EF ++
Subjt:  RPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESL

Arabidopsis top hitse value%identityAlignment
AT1G18210.1 Calcium-binding EF-hand family protein7.2e-0632.81Show/hide
Query:  QQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLK
        ++L  +F   D NGDG+++  EL   F+ +G           L   D+DRDG+I+  EF +L +
Subjt:  QQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLK

AT1G76650.1 calmodulin-like 381.9e-0634.29Show/hide
Query:  QQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKRE
        ++L  +F   D N DGR++  EL ++F  +G  L    A  A+  +D+D DG +D +EF  L+K  ++ E
Subjt:  QQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKRE

AT1G76650.3 calmodulin-like 381.9e-0634.29Show/hide
Query:  QQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKRE
        ++L  +F   D N DGR++  EL ++F  +G  L    A  A+  +D+D DG +D +EF  L+K  ++ E
Subjt:  QQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKRE

AT2G43290.1 Calcium-binding EF-hand family protein3.8e-0730.77Show/hide
Query:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESL
        +P  + +     +I   +L  +F+  D+NGDGR+   EL ++   +G  +P       +H  D++ DG +D  EFESL
Subjt:  MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESL

AT4G03290.1 EF hand calcium-binding protein family5.5e-0631.75Show/hide
Query:  QLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLK
        +L+ +F+  D++GDG++   EL E+F+ +G ++P       +   D + DG +D +EF  L K
Subjt:  QLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCGCAACACCAAAACTTACCAACAAAGGCCGAAGATATCACGACAACAACTAAGCCTAATCTTTAGAAACCATGACCGCAATGGTGACGGCCGCCTCAACGCCAC
CGAGCTCACTGAAGCCTTCCGCTACATCGGTGCCCTCTTGCCGTCGTTGAGAGCTCGCCACGCTCTTCATTATACTGATTCTGACAGAGATGGATTCATTGACGAGCAGG
AATTCGAATCACTCCTCAAGTATGCCGAGAAACGAGAATACACCGTCATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTCGCAACACCAAAACTTACCAACAAAGGCCGAAGATATCACGACAACAACTAAGCCTAATCTTTAGAAACCATGACCGCAATGGTGACGGCCGCCTCAACGCCAC
CGAGCTCACTGAAGCCTTCCGCTACATCGGTGCCCTCTTGCCGTCGTTGAGAGCTCGCCACGCTCTTCATTATACTGATTCTGACAGAGATGGATTCATTGACGAGCAGG
AATTCGAATCACTCCTCAAGTATGCCGAGAAACGAGAATACACCGTCATTTGA
Protein sequenceShow/hide protein sequence
MPRNTKTYQQRPKISRQQLSLIFRNHDRNGDGRLNATELTEAFRYIGALLPSLRARHALHYTDSDRDGFIDEQEFESLLKYAEKREYTVI