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Sed0019634 (gene) of Chayote v1 genome

Gene IDSed0019634
OrganismSechium edule (Chayote v1)
Descriptionserine-rich protein-related
Genome locationLG08:5665156..5665993
RNA-Seq ExpressionSed0019634
SyntenySed0019634
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ESR64378.1 hypothetical protein CICLE_v10010038mg [Citrus clementina]5.6e-1047.67Show/hide
Query:  MCYPNDLRTRPVSWTEFLAVQCNW----VLLQAATETAAG--GGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMKK
        MCYP  +    VS T+ + VQ  W    V +Q A E   G   GG GG GGG + ++C+CSPT HPGSFRCR H ++YVW  R+ K
Subjt:  MCYPNDLRTRPVSWTEFLAVQCNW----VLLQAATETAAG--GGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMKK

KAA0046597.1 hypothetical protein E6C27_scaffold114G001380 [Cucumis melo var. makuwa]7.5e-1559.26Show/hide
Query:  MCYPNDLRTRPVSWTEFLAVQCNWVLLQA--ATETAAGGGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMK
        MCYP+    R    T+FL+ QCNWVL Q   A ET A     G E G    RRCLCSPT HPGSFRCRLHRSEYVWV R +
Subjt:  MCYPNDLRTRPVSWTEFLAVQCNWVLLQA--ATETAAGGGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMK

KAG6589902.1 hypothetical protein SDJN03_15325, partial [Cucurbita argyrosperma subsp. sororia]1.2e-1763.64Show/hide
Query:  MCYPNDLRTRPVSWTEFLAVQCNWVLLQAATETAAGGGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRR
        MCYP+D+  R     EFL VQCNWVLLQ A      GGG       SV +RCLCSPT HPGSFRCRLHRSEYVWV R
Subjt:  MCYPNDLRTRPVSWTEFLAVQCNWVLLQAATETAAGGGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRR

KAG7021840.1 hypothetical protein SDJN02_15568 [Cucurbita argyrosperma subsp. argyrosperma]3.6e-0960.66Show/hide
Query:  MCYPNDLRTRPVSWTEFLAVQCNWVLLQAATETAAGGGGSGGEGGGSVNRRCLCSPTAHPG
        MCYP+DLR   VS  E L VQ NWVLLQAA+       GS   GGGS   RCLCSPT HPG
Subjt:  MCYPNDLRTRPVSWTEFLAVQCNWVLLQAATETAAGGGGSGGEGGGSVNRRCLCSPTAHPG

KGN65356.1 hypothetical protein Csa_020011 [Cucumis sativus]4.6e-1253.75Show/hide
Query:  MCYPNDLRTRPVSWTEFLAVQCNWVLLQAA-TETAAGGGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMK
        MCYP+   +R     +F ++QCNWVL Q    E A     S G+  G   RRCLCSPT HPGSFRCRLHR+EYVWV R +
Subjt:  MCYPNDLRTRPVSWTEFLAVQCNWVLLQAA-TETAAGGGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMK

TrEMBL top hitse value%identityAlignment
A0A0A0LZG6 Uncharacterized protein2.2e-1253.75Show/hide
Query:  MCYPNDLRTRPVSWTEFLAVQCNWVLLQAA-TETAAGGGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMK
        MCYP+   +R     +F ++QCNWVL Q    E A     S G+  G   RRCLCSPT HPGSFRCRLHR+EYVWV R +
Subjt:  MCYPNDLRTRPVSWTEFLAVQCNWVLLQAA-TETAAGGGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMK

A0A5A7TXE6 Uncharacterized protein3.6e-1559.26Show/hide
Query:  MCYPNDLRTRPVSWTEFLAVQCNWVLLQA--ATETAAGGGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMK
        MCYP+    R    T+FL+ QCNWVL Q   A ET A     G E G    RRCLCSPT HPGSFRCRLHRSEYVWV R +
Subjt:  MCYPNDLRTRPVSWTEFLAVQCNWVLLQA--ATETAAGGGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMK

A0A5N5J6W7 Uncharacterized protein1.7e-0948.81Show/hide
Query:  MCYPNDLRTRPVSWTEFLAVQCNWVLLQAA-TET---AAGGGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMKK
        MC+P   R      +  L V   W++LQAA TET    A    +GG GG    ++CLCSPT HPGSFRCR HRS+YVW  R+ K
Subjt:  MCYPNDLRTRPVSWTEFLAVQCNWVLLQAA-TET---AAGGGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMKK

A0A6N2KPX4 Uncharacterized protein1.7e-0948.81Show/hide
Query:  MCYPNDLRTRPVSWTEFLAVQCNWVLLQAA-TET---AAGGGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMKK
        MC+P   R      +  L V   W++LQAA TET    A    +GG GG    ++CLCSPT HPGSFRCR HRS+YVW  R+ K
Subjt:  MCYPNDLRTRPVSWTEFLAVQCNWVLLQAA-TET---AAGGGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMKK

V4TV07 Uncharacterized protein2.7e-1047.67Show/hide
Query:  MCYPNDLRTRPVSWTEFLAVQCNW----VLLQAATETAAG--GGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMKK
        MCYP  +    VS T+ + VQ  W    V +Q A E   G   GG GG GGG + ++C+CSPT HPGSFRCR H ++YVW  R+ K
Subjt:  MCYPNDLRTRPVSWTEFLAVQCNW----VLLQAATETAAG--GGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G52342.1 unknown protein2.8e-0748.98Show/hide
Query:  AAGGGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMKKSS
        A  G  SGG+GGG   ++C+CSP+ HP SF+CR H+ EY W+     SS
Subjt:  AAGGGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMKKSS

AT1G67910.1 unknown protein2.0e-0589.47Show/hide
Query:  CLCSPTAHPGSFRCRLHRS
        CLCSPT HPGSFRCR+HRS
Subjt:  CLCSPTAHPGSFRCRLHRS

AT1G67910.2 unknown protein2.0e-0589.47Show/hide
Query:  CLCSPTAHPGSFRCRLHRS
        CLCSPT HPGSFRCR+HRS
Subjt:  CLCSPTAHPGSFRCRLHRS

AT3G13227.1 serine-rich protein-related1.0e-0663.16Show/hide
Query:  GGGGSGGEGG----GSVNRRCLCSPTAHPGSFRCRLHR
        GGGG GG  G     SV + CLC+PT HPGSFRCR HR
Subjt:  GGGGSGGEGG----GSVNRRCLCSPTAHPGSFRCRLHR

AT5G11090.1 serine-rich protein-related1.2e-0569.57Show/hide
Query:  VNRRCLCSPTAHPGSFRCRLHRS
        ++RRC+CSPT HPGSFRC LH++
Subjt:  VNRRCLCSPTAHPGSFRCRLHRS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGTTACCCAAATGATTTGCGGACTCGGCCGGTGAGCTGGACGGAGTTTTTGGCGGTGCAATGTAATTGGGTCCTCTTGCAGGCGGCGACGGAGACGGCGGCGGGTGG
CGGTGGAAGCGGCGGAGAGGGTGGTGGGTCGGTTAACCGGCGGTGTTTATGCTCGCCGACGGCGCATCCGGGGTCGTTTCGTTGCAGGCTGCATCGAAGTGAGTATGTTT
GGGTGCGACGGATGAAGAAAAGTTCTGTTCAACGGTGA
mRNA sequenceShow/hide mRNA sequence
ATTCCACATATTCCTTTCTTTTCAGCCTCCACAAGATAACCCATATTCATATAAATATCAAATACCAAAATTAATATTGCAAGCAAACAAAATGTGTTACCCAAATGATT
TGCGGACTCGGCCGGTGAGCTGGACGGAGTTTTTGGCGGTGCAATGTAATTGGGTCCTCTTGCAGGCGGCGACGGAGACGGCGGCGGGTGGCGGTGGAAGCGGCGGAGAG
GGTGGTGGGTCGGTTAACCGGCGGTGTTTATGCTCGCCGACGGCGCATCCGGGGTCGTTTCGTTGCAGGCTGCATCGAAGTGAGTATGTTTGGGTGCGACGGATGAAGAA
AAGTTCTGTTCAACGGTGAGCTCTCCCAAAGTAATTCTTCTTCTTTTTTTTCTTTTTGGAAAATACTTTTTTAGACTAAAATTGATTTTAAATTTCAAAATCAAATATTT
TTAATTTACGTGGTATTTTAATATTTCAAATATAAAAAATTGCTTAAATGATATAATTTTACCACAATAATCACTATATTTATATGAAATTTTAATATATTGATGAAATG
TTTACTTTATATTAAATTAAAATAAATTTATATAAAAAAAAGTATTAAACTCAAAATATCCAAATTAAAGAAGTTTGATTTCGAAATTTGAAAATCATGAAAATGTATCT
TTCCTTTTCTTTCTATGAATTTAATTGTTGTTCGGAATGAAGCGGAATCGCTTGAATGTTAGTGTATATCTATTGTTGTGGTGTATGCAATGACAGTAAATATGAATAAC
AGTTGCTTTTACTTGGGTTTTTTTATATACAATATGATATAAATTTATTTAGGAGTATTTTTAGGAGT
Protein sequenceShow/hide protein sequence
MCYPNDLRTRPVSWTEFLAVQCNWVLLQAATETAAGGGGSGGEGGGSVNRRCLCSPTAHPGSFRCRLHRSEYVWVRRMKKSSVQR