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Sed0019666 (gene) of Chayote v1 genome

Gene IDSed0019666
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein
Genome locationLG04:37827624..37830679
RNA-Seq ExpressionSed0019666
SyntenySed0019666
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037451.1 hypothetical protein SDJN02_01078 [Cucurbita argyrosperma subsp. argyrosperma]2.5e-2180.88Show/hide
Query:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
        MTGEE++GPAGPKVLR LYF GAGF+FTIAMNKWR+IER SL QQ+QKQRLD QF ES NDAVQKVV+
Subjt:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
XP_022941532.1 uncharacterized protein LOC111446806 [Cucurbita moschata]9.6e-2179.41Show/hide
Query:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
        MTGEE++GPAGPKVLR LYF GAGF+FTIAMNKWR+IE  SL QQ+QKQRLD QF ES NDAVQKVV+
Subjt:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
XP_022982102.1 uncharacterized protein LOC111481043 [Cucurbita maxima]7.3e-2179.41Show/hide
Query:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
        MTGEE++GPAGPKVLR LYFAGAGF+FTIAMNKWR+IE  SL QQ+QKQRLD QF E+ NDAVQKVV+
Subjt:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
XP_023522224.1 uncharacterized protein LOC111786101 isoform X2 [Cucurbita pepo subsp. pepo]3.0e-2283.82Show/hide
Query:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
        MTGEE++GPAGPKVLR LYFAGAGF+FTIAMNKWR+IER SL QQQQKQRLD QF ES NDAVQKVV+
Subjt:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
XP_038897241.1 uncharacterized protein LOC120085366 [Benincasa hispida]1.9e-2180.88Show/hide
Query:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
        M GEE++GPAGPKVLR LYFAGAGFIFTIA+NKWR+IERNSL +QQQKQRL+ Q +ESRND+VQKVVE
Subjt:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
TrEMBL top hitse value%identityAlignment
A0A0A0L208 Uncharacterized protein2.3e-2077.94Show/hide
Query:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
        MTGEE++GPAGPK+LR LYFAGAGFI + A+NKWR+IERNSL QQQQKQRL+ Q +ES NDAVQKVVE
Subjt:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
A0A5D3DXD1 Transmembrane protein5.1e-2076.47Show/hide
Query:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
        MTGEE++GPAGPK+LR LYFAGAGFI + A+NKWR+IERNSL QQ QKQRL+ Q +ESRND VQKVVE
Subjt:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
A0A6J1C1U1 uncharacterized protein LOC1110065635.1e-2076.47Show/hide
Query:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
        M GEE+SGPAGPKVLRFLYFAGAGF+F IA+NKWR++ER SL QQ QKQ L+ QF+E+ NDAVQKVVE
Subjt:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
A0A6J1FMP5 uncharacterized protein LOC1114468064.6e-2179.41Show/hide
Query:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
        MTGEE++GPAGPKVLR LYF GAGF+FTIAMNKWR+IE  SL QQ+QKQRLD QF ES NDAVQKVV+
Subjt:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
A0A6J1IVQ6 uncharacterized protein LOC1114810433.5e-2179.41Show/hide
Query:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
        MTGEE++GPAGPKVLR LYFAGAGF+FTIAMNKWR+IE  SL QQ+QKQRLD QF E+ NDAVQKVV+
Subjt:  MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G16916.1 unknown protein1.1e-0947.54Show/hide
Query:  GPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE
        GP  PK+LR +YF GAGF+ T A+NKWR++ERNSL +Q+Q++           D+VQK ++
Subjt:  GPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGGGAGAGGAGCTTTCCGGTCCGGCGGGTCCTAAGGTTCTCCGTTTCCTCTATTTTGCCGGTGCCGGATTCATTTTCACAATCGCGATGAACAAGTGGCGGCAGAT
CGAGCGCAATTCTCTGTCGCAACAACAGCAGAAGCAGAGACTGGATCGTCAATTCACGGAATCTCGTAATGATGCGGTGCAGAAAGTCGTTGAGTGA
mRNA sequenceShow/hide mRNA sequence
CCCATACGGAACCTTTGCGTTTGATTTTTTACCCTAAAATTAAATACAACATTTTCCCCCAAATTTTGCGAAGGTGAGAAGATCTGAAAATTCGACCTTTCCGGTTTCCT
GTACACAGAGATTCCAAGGTTTAGGGCATCTCGACGGCGGCGACGGCGGCGGTCTGAAGGAAAAAGCTAATGACGGGAGAGGAGCTTTCCGGTCCGGCGGGTCCTAAGGT
TCTCCGTTTCCTCTATTTTGCCGGTGCCGGATTCATTTTCACAATCGCGATGAACAAGTGGCGGCAGATCGAGCGCAATTCTCTGTCGCAACAACAGCAGAAGCAGAGAC
TGGATCGTCAATTCACGGAATCTCGTAATGATGCGGTGCAGAAAGTCGTTGAGTGATCTCAGGGGTAATGGTCAAGGATCATCAAGATGCTTTCCAGTTCCAGCTCAACG
GTTAAGTCTGTTATTTTCTTCTTGTTCTTGATAAAAGTTTCTATAGGAGGATTATCTATGTTTTTTTAGGTGTGCCACTGGGTAGATTTGAATCATGACCAAACAAATGA
CGCCTCTGTCAATAGATCCAGACATCTCTCTGTTTCTAATCTCTGTTATACGCACAAGTTCATTATGGTCTCTGAAGGAAACAGCATTTTTAAATTGTAACTAGAATACA
GTTCTACTTTTCTACCTGATAGTCATTTCTGAAATTCATTTCTTCTTTTATTATAGGGGCTGATTGCATTTTTTTAGTCATTCAATTTTTAGAGATTTGTCGCATAACGA
CAAAAGTGTCGAC
Protein sequenceShow/hide protein sequence
MTGEELSGPAGPKVLRFLYFAGAGFIFTIAMNKWRQIERNSLSQQQQKQRLDRQFTESRNDAVQKVVE