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Sed0019699 (gene) of Chayote v1 genome

Gene IDSed0019699
OrganismSechium edule (Chayote v1)
DescriptionFerredoxin
Genome locationLG02:49201888..49202727
RNA-Seq ExpressionSed0019699
SyntenySed0019699
Gene Ontology termsGO:0022900 - electron transport chain (biological process)
GO:0009507 - chloroplast (cellular component)
GO:0009055 - electron transfer activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
GO:0051537 - 2 iron, 2 sulfur cluster binding (molecular function)
InterPro domainsIPR001041 - 2Fe-2S ferredoxin-type iron-sulfur binding domain
IPR010241 - Ferredoxin [2Fe-2S], plant
IPR012675 - Beta-grasp domain superfamily
IPR036010 - 2Fe-2S ferredoxin-like superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049364.1 ferredoxin-1 [Cucumis melo var. makuwa]1.7e-5983.45Show/hide
Query:  MATLHFAPSAFSLPKQTHQPTKL---RPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS
        MATLHF PSAFSLPKQ  QP KL   +PT  +  SRRR+VVRSYKVV+EH G+TTELEVDPDESILS+ALD+GL+IPHDCKLGVCMTCPARL+SG VDQS
Subjt:  MATLHFAPSAFSLPKQTHQPTKL---RPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS

Query:  EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        EGMLSDDVV++GYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
Subjt:  EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

XP_004134137.1 ferredoxin C 1, chloroplastic [Cucumis sativus]1.7e-5984.14Show/hide
Query:  MATLHFAPSAFSLPKQTHQPTKL---RPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS
        MATLHF PSAFSLPKQ  QP KL   RPT ++  SRRR+VVRSYKVV+EH G+TTELEVDPDESILS+ALD+GL+IPHDCKLGVCMTCPARL+SG VDQS
Subjt:  MATLHFAPSAFSLPKQTHQPTKL---RPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS

Query:  EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        EGMLSDDVV +GYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
Subjt:  EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

XP_008438679.1 PREDICTED: ferredoxin-1 [Cucumis melo]1.7e-5983.45Show/hide
Query:  MATLHFAPSAFSLPKQTHQPTKL---RPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS
        MATLHF PSAFSLPKQ  QP KL   +PT  +  SRRR+VVRSYKVV+EH G+TTELEVDPDESILS+ALD+GL+IPHDCKLGVCMTCPARL+SG VDQS
Subjt:  MATLHFAPSAFSLPKQTHQPTKL---RPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS

Query:  EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        EGMLSDDVV++GYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
Subjt:  EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

XP_022956084.1 uncharacterized protein LOC111457884 [Cucurbita moschata]6.3e-5982.43Show/hide
Query:  MATLHFAPSAFSLPKQTHQPT------KLRPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAV
        MATLHF PSAFSLPKQ  QPT      KLRPT +L  S+RR+VVRSYKVV+EH G+TTELEVD DESIL +ALD GLDIPHDCKLGVCMTCPARL+SGAV
Subjt:  MATLHFAPSAFSLPKQTHQPT------KLRPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAV

Query:  DQSEGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        DQSEGMLSDDVV++GYSLLCVAYPRSDCHI+TIPEEELLALQLATAND
Subjt:  DQSEGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

XP_038880925.1 ferredoxin C 1, chloroplastic [Benincasa hispida]5.7e-6084.62Show/hide
Query:  MATLHFAPSAFSLPKQTHQPTKL-RPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQSEG
        MATLHF PSAFSLPK+ +QPTKL RPT  +  SRRR+VVRSYKVV+EHGGK TELEVD DESIL++ALD+GL+IPHDCKLGVCMTCPARL+SG VDQSEG
Subjt:  MATLHFAPSAFSLPKQTHQPTKL-RPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQSEG

Query:  MLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        MLSDDVV++GYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
Subjt:  MLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

TrEMBL top hitse value%identityAlignment
A0A0A0L4U6 Ferredoxin8.0e-6084.14Show/hide
Query:  MATLHFAPSAFSLPKQTHQPTKL---RPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS
        MATLHF PSAFSLPKQ  QP KL   RPT ++  SRRR+VVRSYKVV+EH G+TTELEVDPDESILS+ALD+GL+IPHDCKLGVCMTCPARL+SG VDQS
Subjt:  MATLHFAPSAFSLPKQTHQPTKL---RPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS

Query:  EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        EGMLSDDVV +GYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
Subjt:  EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

A0A1S3AX36 Ferredoxin8.0e-6083.45Show/hide
Query:  MATLHFAPSAFSLPKQTHQPTKL---RPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS
        MATLHF PSAFSLPKQ  QP KL   +PT  +  SRRR+VVRSYKVV+EH G+TTELEVDPDESILS+ALD+GL+IPHDCKLGVCMTCPARL+SG VDQS
Subjt:  MATLHFAPSAFSLPKQTHQPTKL---RPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS

Query:  EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        EGMLSDDVV++GYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
Subjt:  EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

A0A5D3D1U0 Ferredoxin8.0e-6083.45Show/hide
Query:  MATLHFAPSAFSLPKQTHQPTKL---RPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS
        MATLHF PSAFSLPKQ  QP KL   +PT  +  SRRR+VVRSYKVV+EH G+TTELEVDPDESILS+ALD+GL+IPHDCKLGVCMTCPARL+SG VDQS
Subjt:  MATLHFAPSAFSLPKQTHQPTKL---RPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS

Query:  EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        EGMLSDDVV++GYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
Subjt:  EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

A0A6J1GY17 Ferredoxin3.1e-5982.43Show/hide
Query:  MATLHFAPSAFSLPKQTHQPT------KLRPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAV
        MATLHF PSAFSLPKQ  QPT      KLRPT +L  S+RR+VVRSYKVV+EH G+TTELEVD DESIL +ALD GLDIPHDCKLGVCMTCPARL+SGAV
Subjt:  MATLHFAPSAFSLPKQTHQPT------KLRPTIRLP-SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAV

Query:  DQSEGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        DQSEGMLSDDVV++GYSLLCVAYPRSDCHI+TIPEEELLALQLATAND
Subjt:  DQSEGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

A0A6J1IWL8 Ferredoxin1.2e-5880.41Show/hide
Query:  MATLHFAPSAFSLPKQTHQPTKLRPTIRLP-------SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAV
        MATLHF PSAFSLPKQ  QPTKL    +L        S+RR+VVRSYKVV+EH G+TTELEVD DESIL++ALD GLDIPHDCKLGVCMTCPARL+SGAV
Subjt:  MATLHFAPSAFSLPKQTHQPTKLRPTIRLP-------SRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAV

Query:  DQSEGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND
        DQSEGMLSDDVV++GYSLLCVAYPRSDCHI+TIPEEELLALQLATAND
Subjt:  DQSEGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLALQLATAND

SwissProt top hitse value%identityAlignment
O23344 Ferredoxin C 1, chloroplastic2.9e-4677.78Show/hide
Query:  RMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQSEGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLA
        R++ R+YKVVVEH GKTTELEV+PDE+ILS ALD GLD+P+DC LGVCMTCPA+L++G VDQS GMLSDDVV+RGY+LLC +YP SDCHIK IPEEELL+
Subjt:  RMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQSEGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLA

Query:  LQLATAND
        LQLATAND
Subjt:  LQLATAND

P00252 Ferredoxin-12.3e-1948.94Show/hide
Query:  YKV-VVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEEL
        YKV +V+  G  T ++V  DE IL  A D GLD+P+ C+ G C TC  +++SG VDQS +  L DD +++GY L CVAYP SD  I+T  EE+L
Subjt:  YKV-VVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEEL

P0A3C9 Ferredoxin-11.7e-1949.47Show/hide
Query:  SYKV-VVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEEL
        +YKV +V   G  T ++V  DE IL  A + GLD+P  C+ G C TC  +L+ G VDQS +  L DD +++G+ L CVAYPRSDC I T  EEEL
Subjt:  SYKV-VVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEEL

P0A3D0 Ferredoxin-11.7e-1949.47Show/hide
Query:  SYKV-VVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEEL
        +YKV +V   G  T ++V  DE IL  A + GLD+P  C+ G C TC  +L+ G VDQS +  L DD +++G+ L CVAYPRSDC I T  EEEL
Subjt:  SYKV-VVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEEL

P0A3D1 Ferredoxin-11.7e-1949.47Show/hide
Query:  SYKV-VVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEEL
        +YKV +V   G  T ++V  DE IL  A + GLD+P  C+ G C TC  +L+ G VDQS +  L DD +++G+ L CVAYPRSDC I T  EEEL
Subjt:  SYKV-VVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEEL

Arabidopsis top hitse value%identityAlignment
AT1G10960.1 ferredoxin 14.6e-1537.62Show/hide
Query:  RRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEEL
        R   + +YKV         E+E + D  +L  A + GLD+P+ C+ G C +C  +++SG++DQS +  L D+ +  GY L CVAYP SD  I+T  EE +
Subjt:  RRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEEL

Query:  L
        +
Subjt:  L

AT1G60950.1 2Fe-2S ferredoxin-like superfamily protein6.0e-1536.63Show/hide
Query:  RRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEEL
        R   + +YKV         E+E D D  +L  A + G+D+P+ C+ G C +C  +++SG+VDQS +  L D+ +  G+ L C AYP SD  I+T  EE++
Subjt:  RRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQS-EGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEEL

Query:  L
        +
Subjt:  L

AT2G27510.1 ferredoxin 31.2e-1846.81Show/hide
Query:  YKV-VVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQSEG-MLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEEL
        YKV ++   G+  E EV  D+ IL  A + G+D+P+ C+ G C TC  +++SG VDQS+G  L D  +++GY L CVAYP+SDC I T  E EL
Subjt:  YKV-VVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQSEG-MLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEEL

AT4G14890.1 2Fe-2S ferredoxin-like superfamily protein2.0e-4777.78Show/hide
Query:  RMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQSEGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLA
        R++ R+YKVVVEH GKTTELEV+PDE+ILS ALD GLD+P+DC LGVCMTCPA+L++G VDQS GMLSDDVV+RGY+LLC +YP SDCHIK IPEEELL+
Subjt:  RMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQSEGMLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELLA

Query:  LQLATAND
        LQLATAND
Subjt:  LQLATAND

AT5G10000.1 ferredoxin 45.0e-1439.53Show/hide
Query:  GKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQSEG-MLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELL
        G+  E+E + D  IL +A + GL++P+ C+ G C TC  +L+SG VDQS G  L ++ + +GY L C+A P  DC + T  + +L+
Subjt:  GKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQSEG-MLSDDVVDRGYSLLCVAYPRSDCHIKTIPEEELL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAACTCTTCATTTCGCCCCATCCGCTTTTTCTCTACCAAAGCAAACCCATCAACCCACCAAGCTCCGACCCACAATCCGGCTACCCTCACGGCGGCGCATGGTGGT
CCGGTCGTACAAAGTGGTGGTGGAGCACGGCGGCAAAACCACCGAGCTGGAAGTGGATCCAGACGAGAGCATTTTGAGCACCGCATTGGACCATGGGCTGGACATTCCGC
ACGACTGCAAGCTGGGTGTGTGCATGACCTGCCCGGCTCGGCTGATCAGCGGCGCCGTGGACCAGAGCGAGGGCATGCTCAGCGACGACGTCGTCGACCGCGGCTACTCG
CTTCTCTGCGTCGCTTATCCCCGCTCCGATTGCCACATCAAAACCATCCCCGAGGAGGAATTGTTGGCTCTTCAATTAGCCACTGCTAACGACTGA
mRNA sequenceShow/hide mRNA sequence
ATTTATTCATACAAACACCCATACAGTTGGTTTGTGTTTGGGCCCATGGTTTGGCAAATTACATGAAAGCAAAATCAGAATAAACCAAATCCTTATCCCTTCACAACCCA
CATCCACAAAATCCCCTCCTTCCATTTCTCCCCCAAACACACACACACACAAAAAAACAATGGCAACTCTTCATTTCGCCCCATCCGCTTTTTCTCTACCAAAGCAAACC
CATCAACCCACCAAGCTCCGACCCACAATCCGGCTACCCTCACGGCGGCGCATGGTGGTCCGGTCGTACAAAGTGGTGGTGGAGCACGGCGGCAAAACCACCGAGCTGGA
AGTGGATCCAGACGAGAGCATTTTGAGCACCGCATTGGACCATGGGCTGGACATTCCGCACGACTGCAAGCTGGGTGTGTGCATGACCTGCCCGGCTCGGCTGATCAGCG
GCGCCGTGGACCAGAGCGAGGGCATGCTCAGCGACGACGTCGTCGACCGCGGCTACTCGCTTCTCTGCGTCGCTTATCCCCGCTCCGATTGCCACATCAAAACCATCCCC
GAGGAGGAATTGTTGGCTCTTCAATTAGCCACTGCTAACGACTGATTCTGATCCCTTTTATTCTTTTTCTCAATTGGGTTTTTGCCTCAGGTTTGAATGGTTTTGTAGGT
TTAATTCTGGTTTAGTTTAATTATATTGAAATCAATGGCTATGGGGCTCTGTTTAGTTTTCATGTTGTTTGATTGTTTGTGTTTATTGATAATTGCTAGTTGATATAGCT
GTGAATTCAATCCACATTTAAGTAGGAATCAATTTTCAATTTGTTTTCTTGATACTCTAATATTGTAGCG
Protein sequenceShow/hide protein sequence
MATLHFAPSAFSLPKQTHQPTKLRPTIRLPSRRRMVVRSYKVVVEHGGKTTELEVDPDESILSTALDHGLDIPHDCKLGVCMTCPARLISGAVDQSEGMLSDDVVDRGYS
LLCVAYPRSDCHIKTIPEEELLALQLATAND