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Sed0019700 (gene) of Chayote v1 genome

Gene IDSed0019700
OrganismSechium edule (Chayote v1)
Description60S acidic ribosomal protein P1
Genome locationLG05:2427432..2428296
RNA-Seq ExpressionSed0019700
SyntenySed0019700
Gene Ontology termsGO:0002181 - cytoplasmic translation (biological process)
GO:0006414 - translational elongation (biological process)
GO:0032147 - activation of protein kinase activity (biological process)
GO:0022625 - cytosolic large ribosomal subunit (cellular component)
GO:0003735 - structural constituent of ribosome (molecular function)
GO:0030295 - protein kinase activator activity (molecular function)
GO:0043021 - ribonucleoprotein complex binding (molecular function)
InterPro domainsIPR027534 - Ribosomal protein L12/P1/P2 family
IPR038716 - Ribosomal protein P1/P2, N-terminal domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
RID43722.1 hypothetical protein BRARA_I00567 [Brassica rapa]6.0e-2869.91Show/hide
Query:  TSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVE---KKEEVM
        TSELACTYAALILHDDGI +TAEKI+ LV AA V VESYWPSLFAKL  K++IDDLI+N G++  AAAP++     +N  AAA A PAA E   KKEEV 
Subjt:  TSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVE---KKEEVM

Query:  EESEDDMVFGLFD
        EESEDDMVFGLFD
Subjt:  EESEDDMVFGLFD

XP_012843499.1 PREDICTED: 60S acidic ribosomal protein P1-like [Erythranthe guttata]6.0e-2867.86Show/hide
Query:  MATSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVEKKEEVME
        M+  E+ACTYAALILHDDGIAVTAEKI+AL+ AA +TVESYWPSLFAKL  KR+I+DL++N GS    AA   AA T   +AAAA+A PAA EKKEE  E
Subjt:  MATSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVEKKEEVME

Query:  ESEDDMVFGLFD
        ES+DDM F LFD
Subjt:  ESEDDMVFGLFD

XP_013659163.1 60S acidic ribosomal protein P1 isoform X2 [Brassica napus]1.3e-2769.03Show/hide
Query:  TSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVE---KKEEVM
        TSELACTYAALILHDDGI +TAEKI+ LV AA V VESYWPSLFAKL  K++IDDLI+N G++  AAAP++     +N  AAA A P+A E   KKEEV 
Subjt:  TSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVE---KKEEVM

Query:  EESEDDMVFGLFD
        EESEDDMVFGLFD
Subjt:  EESEDDMVFGLFD

XP_022138163.1 60S acidic ribosomal protein P1-like isoform X1 [Momordica charantia]2.9e-3076.15Show/hide
Query:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDS-NAAAAASADPAAVEKKEEVMEESE
        ELACTYAALILHDD I+VTAEKI+ LV AAG+TVESYWPSLFAKL+SKR+IDDLILN GSAA A+AP+S AS+ S +A+AA +  PA VEKKEE +EESE
Subjt:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDS-NAAAAASADPAAVEKKEEVMEESE

Query:  DDMVFGLFD
        DD+VFGLFD
Subjt:  DDMVFGLFD

XP_022138164.1 60S acidic ribosomal protein P1-like isoform X2 [Momordica charantia]6.8e-3276.11Show/hide
Query:  MATSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDS-NAAAAASADPAAVEKKEEVM
        M+TSELACTYAALILHDD I+VTAEKI+ LV AAG+TVESYWPSLFAKL+SKR+IDDLILN GSAA A+AP+S AS+ S +A+AA +  PA VEKKEE +
Subjt:  MATSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDS-NAAAAASADPAAVEKKEEVM

Query:  EESEDDMVFGLFD
        EESEDD+VFGLFD
Subjt:  EESEDDMVFGLFD

TrEMBL top hitse value%identityAlignment
A0A078G324 BnaA09g04820D protein2.9e-2869.91Show/hide
Query:  TSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVE---KKEEVM
        TSELACTYAALILHDDGI +TAEKI+ LV AA V VESYWPSLFAKL  K++IDDLI+N G++  AAAP++     +N  AAA A PAA E   KKEEV 
Subjt:  TSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVE---KKEEVM

Query:  EESEDDMVFGLFD
        EESEDDMVFGLFD
Subjt:  EESEDDMVFGLFD

A0A397XR95 Uncharacterized protein2.9e-2869.91Show/hide
Query:  TSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVE---KKEEVM
        TSELACTYAALILHDDGI +TAEKI+ LV AA V VESYWPSLFAKL  K++IDDLI+N G++  AAAP++     +N  AAA A PAA E   KKEEV 
Subjt:  TSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVE---KKEEVM

Query:  EESEDDMVFGLFD
        EESEDDMVFGLFD
Subjt:  EESEDDMVFGLFD

A0A6J1C9A3 60S acidic ribosomal protein P1-like isoform X23.3e-3276.11Show/hide
Query:  MATSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDS-NAAAAASADPAAVEKKEEVM
        M+TSELACTYAALILHDD I+VTAEKI+ LV AAG+TVESYWPSLFAKL+SKR+IDDLILN GSAA A+AP+S AS+ S +A+AA +  PA VEKKEE +
Subjt:  MATSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDS-NAAAAASADPAAVEKKEEVM

Query:  EESEDDMVFGLFD
        EESEDD+VFGLFD
Subjt:  EESEDDMVFGLFD

A0A6J1CC92 60S acidic ribosomal protein P1-like isoform X11.4e-3076.15Show/hide
Query:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDS-NAAAAASADPAAVEKKEEVMEESE
        ELACTYAALILHDD I+VTAEKI+ LV AAG+TVESYWPSLFAKL+SKR+IDDLILN GSAA A+AP+S AS+ S +A+AA +  PA VEKKEE +EESE
Subjt:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDS-NAAAAASADPAAVEKKEEVMEESE

Query:  DDMVFGLFD
        DD+VFGLFD
Subjt:  DDMVFGLFD

A0A7N2MH30 Uncharacterized protein8.4e-2868.14Show/hide
Query:  MATSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVEKKEEVME
        M+T ELACTYA+L+LHDDGIA+T+EKI+ LV AAGV+VESYWPSLFAKLA KRSIDDLILNAGS   AA    +A       A A+A PA  EKKEEV E
Subjt:  MATSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVEKKEEVME

Query:  ESED-DMVFGLFD
        ES+D D+ FGLFD
Subjt:  ESED-DMVFGLFD

SwissProt top hitse value%identityAlignment
O23095 60S acidic ribosomal protein P1-21.0e-2256.88Show/hide
Query:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGS-AATAAAPISAASTDSNAAAAASADPAAVEKKEEVMEESE
        ELAC+YA +IL D+GIA+T++KI+ LV AAGV +ESYWP LFAK+A KR++ DLI+N G+      AP+SAA+  + A  AA+A PA  EKK+E  EES+
Subjt:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGS-AATAAAPISAASTDSNAAAAASADPAAVEKKEEVMEESE

Query:  DDMVFGLFD
         D+ FGLFD
Subjt:  DDMVFGLFD

P29763 60S acidic ribosomal protein P11.9e-2157.14Show/hide
Query:  MATSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVEKKEEVME
        M+TSELACTYAALILHDDG+ +TA+ I+ +  AAGV VE YWP+LFAKL +K+S+DDLI N G A   AAP +AA     AA  A A  AA +K+E+   
Subjt:  MATSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVEKKEEVME

Query:  ESEDDMVFGLFD
          E+DM F LFD
Subjt:  ESEDDMVFGLFD

P52855 60S acidic ribosomal protein P19.0e-2763.39Show/hide
Query:  MATSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVEKKEEVME
        MA+ ELAC YAALIL DDGIA+TAEKI+ +V AA + VESYWP+LFAKL  KR+++DLIL+ GS    AAP++AA+    AAAAA+  PA  EKKEE  E
Subjt:  MATSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVEKKEEVME

Query:  ESEDDMVFGLFD
        ES+DDM F LFD
Subjt:  ESEDDMVFGLFD

Q8LCW9 60S acidic ribosomal protein P1-12.7e-2356.88Show/hide
Query:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVE-KKEEVMEESE
        ELAC+YA +IL D+GIA+TA+KI+ LV AAGV++ESYWP LFAK+A KR++ DLI+N G+     AP++AA+  +   AAA+  PAA E KK+E  EES+
Subjt:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVE-KKEEVMEESE

Query:  DDMVFGLFD
         D+ FGLFD
Subjt:  DDMVFGLFD

Q8LEQ0 60S acidic ribosomal protein P1-38.4e-2556.48Show/hide
Query:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVEKKEEVMEESED
        ELAC+YA +IL D+GIA+TA+KI+ LV AAGVT+ESYWP LFAK+A KR++ DLI+N G+     AP++AA+  +   AAA+A  A  +KK+E  EES+ 
Subjt:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVEKKEEVMEESED

Query:  DMVFGLFD
        D+ FGLFD
Subjt:  DMVFGLFD

Arabidopsis top hitse value%identityAlignment
AT1G01100.1 60S acidic ribosomal protein family1.9e-2456.88Show/hide
Query:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVE-KKEEVMEESE
        ELAC+YA +IL D+GIA+TA+KI+ LV AAGV++ESYWP LFAK+A KR++ DLI+N G+     AP++AA+  +   AAA+  PAA E KK+E  EES+
Subjt:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVE-KKEEVMEESE

Query:  DDMVFGLFD
         D+ FGLFD
Subjt:  DDMVFGLFD

AT1G01100.2 60S acidic ribosomal protein family1.9e-2456.88Show/hide
Query:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVE-KKEEVMEESE
        ELAC+YA +IL D+GIA+TA+KI+ LV AAGV++ESYWP LFAK+A KR++ DLI+N G+     AP++AA+  +   AAA+  PAA E KK+E  EES+
Subjt:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVE-KKEEVMEESE

Query:  DDMVFGLFD
         D+ FGLFD
Subjt:  DDMVFGLFD

AT5G24510.1 60S acidic ribosomal protein family1.5e-2457.52Show/hide
Query:  MATSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAA-PISAASTDSNAAAAASADPAAVEKKEEVM
        M+TSELACTYAALILHDDGI +TAE IS LV  A V VESYWPSLFAKL  K++IDDLI+N G+     A P++ A+    A+ + S       + E + 
Subjt:  MATSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAA-PISAASTDSNAAAAASADPAAVEKKEEVM

Query:  EESEDDMVFGLFD
        EESEDDM+ GLFD
Subjt:  EESEDDMVFGLFD

AT5G47700.1 60S acidic ribosomal protein family6.0e-2656.48Show/hide
Query:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVEKKEEVMEESED
        ELAC+YA +IL D+GIA+TA+KI+ LV AAGVT+ESYWP LFAK+A KR++ DLI+N G+     AP++AA+  +   AAA+A  A  +KK+E  EES+ 
Subjt:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVEKKEEVMEESED

Query:  DMVFGLFD
        D+ FGLFD
Subjt:  DMVFGLFD

AT5G47700.2 60S acidic ribosomal protein family6.0e-2656.48Show/hide
Query:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVEKKEEVMEESED
        ELAC+YA +IL D+GIA+TA+KI+ LV AAGVT+ESYWP LFAK+A KR++ DLI+N G+     AP++AA+  +   AAA+A  A  +KK+E  EES+ 
Subjt:  ELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVEKKEEVMEESED

Query:  DMVFGLFD
        D+ FGLFD
Subjt:  DMVFGLFD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGACCAGTGAACTCGCTTGCACCTACGCCGCCTTGATTCTTCACGACGACGGCATCGCCGTCACGGCGGAGAAGATTTCCGCATTGGTGAACGCTGCCGGCGTTAC
CGTCGAATCGTACTGGCCTTCTCTCTTCGCTAAGTTAGCCTCGAAACGGAGCATCGACGATCTCATCCTCAACGCCGGATCTGCTGCGACTGCGGCTGCTCCGATCTCCG
CCGCATCTACCGACAGCAATGCCGCCGCCGCCGCCTCCGCGGATCCTGCCGCCGTAGAGAAGAAGGAAGAGGTTATGGAAGAGAGCGAGGACGACATGGTGTTCGGTTTG
TTTGATTAG
mRNA sequenceShow/hide mRNA sequence
CTGAAATTCTCTGCAATTCTTTGTAATTCTCAGCTGCTTTGTTTCTTCCATTGCAATGGCGACCAGTGAACTCGCTTGCACCTACGCCGCCTTGATTCTTCACGACGACG
GCATCGCCGTCACGGCGGAGAAGATTTCCGCATTGGTGAACGCTGCCGGCGTTACCGTCGAATCGTACTGGCCTTCTCTCTTCGCTAAGTTAGCCTCGAAACGGAGCATC
GACGATCTCATCCTCAACGCCGGATCTGCTGCGACTGCGGCTGCTCCGATCTCCGCCGCATCTACCGACAGCAATGCCGCCGCCGCCGCCTCCGCGGATCCTGCCGCCGT
AGAGAAGAAGGAAGAGGTTATGGAAGAGAGCGAGGACGACATGGTGTTCGGTTTGTTTGATTAG
Protein sequenceShow/hide protein sequence
MATSELACTYAALILHDDGIAVTAEKISALVNAAGVTVESYWPSLFAKLASKRSIDDLILNAGSAATAAAPISAASTDSNAAAAASADPAAVEKKEEVMEESEDDMVFGL
FD