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Sed0019715 (gene) of Chayote v1 genome

Gene IDSed0019715
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:24476759..24477056
RNA-Seq ExpressionSed0019715
SyntenySed0019715
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0064577.1 uncharacterized protein E6C27_scaffold255G002980 [Cucumis melo var. makuwa]8.3e-3077.55Show/hide
Query:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG------------LP----AMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
        SNEEWRKNADTHKM+PEDVKAAGVEASKRPPG            LP     MTV GL++VGAIGYFTLYS+KKPEASAKDVAKVATNVAEPEDTKPRK
Subjt:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG------------LP----AMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
XP_004145498.1 uncharacterized protein LOC101212329 [Cucumis sativus]2.0e-2875.51Show/hide
Query:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG------------LP----AMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
        SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG            LP     MTV GL++VG IGY TLY+LKKPEASAKDVAKVATNVAEPE+TKPRK
Subjt:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG------------LP----AMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
XP_008452845.1 PREDICTED: uncharacterized protein LOC103493743 [Cucumis melo]8.3e-3077.55Show/hide
Query:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG------------LP----AMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
        SNEEWRKNADTHKM+PEDVKAAGVEASKRPPG            LP     MTV GL++VGAIGYFTLYS+KKPEASAKDVAKVATNVAEPEDTKPRK
Subjt:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG------------LP----AMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
XP_022940906.1 uncharacterized protein LOC111446354 [Cucurbita moschata]7.0e-2973.47Show/hide
Query:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG----------------LPAMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
        SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG                +  MT+ GL +VGAIGY TLY++KKPEASAKDVAKVATNVAEPEDTKPRK
Subjt:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG----------------LPAMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
XP_022981851.1 uncharacterized protein LOC111480870 [Cucurbita maxima]9.1e-2972.45Show/hide
Query:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG----------------LPAMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
        SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG                +  MT+ GL +VGAIGY TLY++KKPEASAKDVAKVATN+AEPEDTKPRK
Subjt:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG----------------LPAMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
TrEMBL top hitse value%identityAlignment
A0A0A0L315 Uncharacterized protein9.9e-2975.51Show/hide
Query:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG------------LP----AMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
        SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG            LP     MTV GL++VG IGY TLY+LKKPEASAKDVAKVATNVAEPE+TKPRK
Subjt:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG------------LP----AMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
A0A1S3BVM2 uncharacterized protein LOC1034937434.0e-3077.55Show/hide
Query:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG------------LP----AMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
        SNEEWRKNADTHKM+PEDVKAAGVEASKRPPG            LP     MTV GL++VGAIGYFTLYS+KKPEASAKDVAKVATNVAEPEDTKPRK
Subjt:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG------------LP----AMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
A0A5A7VC84 Uncharacterized protein4.0e-3077.55Show/hide
Query:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG------------LP----AMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
        SNEEWRKNADTHKM+PEDVKAAGVEASKRPPG            LP     MTV GL++VGAIGYFTLYS+KKPEASAKDVAKVATNVAEPEDTKPRK
Subjt:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG------------LP----AMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
A0A6J1FJP6 uncharacterized protein LOC1114463543.4e-2973.47Show/hide
Query:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG----------------LPAMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
        SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG                +  MT+ GL +VGAIGY TLY++KKPEASAKDVAKVATNVAEPEDTKPRK
Subjt:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG----------------LPAMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
A0A6J1IXP8 uncharacterized protein LOC1114808704.4e-2972.45Show/hide
Query:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG----------------LPAMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
        SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG                +  MT+ GL +VGAIGY TLY++KKPEASAKDVAKVATN+AEPEDTKPRK
Subjt:  SNEEWRKNADTHKMKPEDVKAAGVEASKRPPG----------------LPAMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G31830.1 unknown protein4.1e-1955.21Show/hide
Query:  EEWRKNADTHKMKPEDVKAAGVEASKRPPG------------LP----AMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK
        E+WRK ADT KM  E VKAAGVE+SKRPPG            LP     M + GL + GAI Y  +Y+ KKPEA+A DVAK AT  A+PEDT PRK
Subjt:  EEWRKNADTHKMKPEDVKAAGVEASKRPPG------------LP----AMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATTAGCAACGAGGAATGGAGGAAAAATGCAGACACTCACAAAATGAAGCCAGAGGATGTTAAAGCAGCAGGAGTGGAGGCCTCCAAGAGGCCTCCAGGCCTCCC
AGCCATGACCGTCACCGGCCTCGTTGTCGTCGGTGCCATCGGGTATTTCACCTTATATTCCTTGAAAAAACCCGAAGCCTCCGCCAAAGATGTCGCCAAGGTTGCTACTA
ATGTGGCTGAACCTGAAGATACTAAGCCCAGGAAGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGAATTAGCAACGAGGAATGGAGGAAAAATGCAGACACTCACAAAATGAAGCCAGAGGATGTTAAAGCAGCAGGAGTGGAGGCCTCCAAGAGGCCTCCAGGCCTCCC
AGCCATGACCGTCACCGGCCTCGTTGTCGTCGGTGCCATCGGGTATTTCACCTTATATTCCTTGAAAAAACCCGAAGCCTCCGCCAAAGATGTCGCCAAGGTTGCTACTA
ATGTGGCTGAACCTGAAGATACTAAGCCCAGGAAGTAG
Protein sequenceShow/hide protein sequence
MGISNEEWRKNADTHKMKPEDVKAAGVEASKRPPGLPAMTVTGLVVVGAIGYFTLYSLKKPEASAKDVAKVATNVAEPEDTKPRK