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Sed0019748 (gene) of Chayote v1 genome

Gene IDSed0019748
OrganismSechium edule (Chayote v1)
DescriptionNAC domain protein
Genome locationLG04:42354658..42355167
RNA-Seq ExpressionSed0019748
SyntenySed0019748
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036871.1 uncharacterized protein E6C27_scaffold20G001820 [Cucumis melo var. makuwa]9.9e-2166.33Show/hide
Query:  MPTIFQSQSQLDQRPSLPPAGREPSRSRGFRSTCRSLSFGGW-----NFTA-SGDNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA
        MPTIFQSQ    + PS+  AGRE  R+R  RSTCRSLSFGG      N  A  GD  RR QG REVLRRAL PP R+PTLRW+NFRPTPSRLS MSMA
Subjt:  MPTIFQSQSQLDQRPSLPPAGREPSRSRGFRSTCRSLSFGGW-----NFTA-SGDNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA

KAG6607862.1 hypothetical protein SDJN03_01204, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2471.13Show/hide
Query:  MPTIFQSQSQLDQRPSLPPAGREPSRSRGFRSTCRSLSF-----GGWNFTASGDNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA
        MPTIFQSQ Q   RPS   A RE  RSR  RS CRSLSF     GG N TA+GD  RRLQGRRE+LRRAL PP R+PTLRWLNFR TPSRLSNMSMA
Subjt:  MPTIFQSQSQLDQRPSLPPAGREPSRSRGFRSTCRSLSF-----GGWNFTASGDNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA

KAG7024857.1 hypothetical protein SDJN02_13676, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-2573.74Show/hide
Query:  MPTIFQSQSQLDQRPSL-PPAGREPSRSRGFRSTCRSLSFGGW------NFTASGDNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA
        MPTIFQSQ Q D+RPSL   AGREPSRS   RSTCRS SF G         TA GD  RR QGRREVLRRAL PP RKPTLRWLNFRPTPSRLSNMSMA
Subjt:  MPTIFQSQSQLDQRPSL-PPAGREPSRSRGFRSTCRSLSFGGW------NFTASGDNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA

KGN60027.2 hypothetical protein Csa_001878 [Cucumis sativus]4.4e-2166.33Show/hide
Query:  MPTIFQSQSQLDQRPSLPPAGREPSRSRGFRSTCRSLSFGGW-----NFTA-SGDNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA
        MPTIFQSQ    + PS+  AGREP R+R  RSTCRS SFGG      N  A  GD  RR QG REVLRRAL PP R+PTLRW+NFRPTPSRLS MSMA
Subjt:  MPTIFQSQSQLDQRPSLPPAGREPSRSRGFRSTCRSLSFGGW-----NFTA-SGDNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA

XP_011652880.1 uncharacterized protein LOC105435142 [Cucumis sativus]4.4e-2166.33Show/hide
Query:  MPTIFQSQSQLDQRPSLPPAGREPSRSRGFRSTCRSLSFGGW-----NFTA-SGDNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA
        MPTIFQSQ    + PS+  AGREP R+R  RSTCRS SFGG      N  A  GD  RR QG REVLRRAL PP R+PTLRW+NFRPTPSRLS MSMA
Subjt:  MPTIFQSQSQLDQRPSLPPAGREPSRSRGFRSTCRSLSFGGW-----NFTA-SGDNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA

TrEMBL top hitse value%identityAlignment
A0A068UC67 Uncharacterized protein9.4e-0972.09Show/hide
Query:  DNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSM
        D  RR Q ++E+LRRAL PP R+PTLRWL+FRPTPSRL NMSM
Subjt:  DNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSM

A0A0A0LD23 Uncharacterized protein2.2e-2166.33Show/hide
Query:  MPTIFQSQSQLDQRPSLPPAGREPSRSRGFRSTCRSLSFGGW-----NFTA-SGDNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA
        MPTIFQSQ    + PS+  AGREP R+R  RSTCRS SFGG      N  A  GD  RR QG REVLRRAL PP R+PTLRW+NFRPTPSRLS MSMA
Subjt:  MPTIFQSQSQLDQRPSLPPAGREPSRSRGFRSTCRSLSFGGW-----NFTA-SGDNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA

A0A5A7T5L7 Uncharacterized protein4.8e-2166.33Show/hide
Query:  MPTIFQSQSQLDQRPSLPPAGREPSRSRGFRSTCRSLSFGGW-----NFTA-SGDNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA
        MPTIFQSQ    + PS+  AGRE  R+R  RSTCRSLSFGG      N  A  GD  RR QG REVLRRAL PP R+PTLRW+NFRPTPSRLS MSMA
Subjt:  MPTIFQSQSQLDQRPSLPPAGREPSRSRGFRSTCRSLSFGGW-----NFTA-SGDNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA

A0A6I9UJY4 uncharacterized protein LOC1051770287.2e-0978.05Show/hide
Query:  RRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA
        R  QG +EV+RRAL PPC+KPT RW NFRPTPSRLSNMSMA
Subjt:  RRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA

A0A6N2MHB8 Uncharacterized protein5.5e-0955.41Show/hide
Query:  SRSRGFRSTCR------SLSFGGWNFTASGDNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA
        S S G RSTC       S+      +    D  RR Q  RE+LRRALAPP R+ TLRW NF+PTPSRLSNMSMA
Subjt:  SRSRGFRSTCR------SLSFGGWNFTASGDNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G15518.1 unknown protein7.1e-0977.14Show/hide
Query:  GRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMS
        G REVLRRAL PP R+  LRWLNFRPTPSRL  MS
Subjt:  GRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTACAATTTTTCAGTCCCAATCGCAGCTAGACCAACGGCCGTCGCTCCCCCCCGCCGGCCGGGAACCGAGCCGGAGCCGTGGCTTTAGATCGACTTGCAGGAGCTT
GAGTTTTGGTGGCTGGAATTTCACAGCGTCCGGAGATAATCACCGGCGGCTTCAGGGCAGAAGAGAAGTGTTGAGAAGGGCGTTGGCGCCGCCTTGTCGGAAACCTACTC
TCCGGTGGTTGAATTTCCGGCCGACTCCTAGTCGGCTTTCGAATATGTCTATGGCTTGA
mRNA sequenceShow/hide mRNA sequence
TCTCCAAATTCAATCTGGGTTTTGATTCTACTCTCCAAAAATGCCTACAATTTTTCAGTCCCAATCGCAGCTAGACCAACGGCCGTCGCTCCCCCCCGCCGGCCGGGAAC
CGAGCCGGAGCCGTGGCTTTAGATCGACTTGCAGGAGCTTGAGTTTTGGTGGCTGGAATTTCACAGCGTCCGGAGATAATCACCGGCGGCTTCAGGGCAGAAGAGAAGTG
TTGAGAAGGGCGTTGGCGCCGCCTTGTCGGAAACCTACTCTCCGGTGGTTGAATTTCCGGCCGACTCCTAGTCGGCTTTCGAATATGTCTATGGCTTGATCGGAAGACTT
GTTGTTTCGATTTTGAATTTTAATTTTTTCGATTATTCTTTCATTCATATTTTACATAATTTTGTGATTTGTTTTTACTTTTCGGCTTTGTTTTGTACAATCTGTGGATG
ATTCAATGAATTGGTTGATTCTGTTCCTAAATTTGGCTATAATTTTTCGTTTCTTTGTGGGTTTGTTGAT
Protein sequenceShow/hide protein sequence
MPTIFQSQSQLDQRPSLPPAGREPSRSRGFRSTCRSLSFGGWNFTASGDNHRRLQGRREVLRRALAPPCRKPTLRWLNFRPTPSRLSNMSMA