; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0019813 (gene) of Chayote v1 genome

Gene IDSed0019813
OrganismSechium edule (Chayote v1)
Descriptionbinding partner of ACD11 1-like
Genome locationLG01:2803030..2805234
RNA-Seq ExpressionSed0019813
SyntenySed0019813
Gene Ontology termsGO:0003723 - RNA binding (molecular function)
InterPro domainsIPR000504 - RNA recognition motif domain
IPR012677 - Nucleotide-binding alpha-beta plait domain superfamily
IPR035979 - RNA-binding domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022148663.1 binding partner of ACD11 1-like isoform X1 [Momordica charantia]2.9e-9984.96Show/hide
Query:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG
        +RTVRV N+SLSA EKDLR+FFSFSGEIEFVEMRKD ++SQVAFVTFKDSKGAETSILLSGATI DQPVSITS PDYNLPAAAA S P+ VS+P  EN G
Subjt:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG

Query:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTAGTAIMS
        S T+GSAM+KAEDVVSSMLAKGF+LGKDALNKAKSFDERHQLTSTAS KVASLDQKIGLSEKIS+GTTVVNE+V++MDEKFQVSEKTKAAVSTAG+AIM+
Subjt:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTAGTAIMS

Query:  NRYVSNGASWVSQTFQRVAKKAVEVSQKTKEK-VLAEDQGKPVGSS
        NRYVS GASWV++ FQRVAK AVEVSQKTKEK VLAEDQGK VG+S
Subjt:  NRYVSNGASWVSQTFQRVAKKAVEVSQKTKEK-VLAEDQGKPVGSS

XP_022947210.1 binding partner of ACD11 1-like [Cucurbita moschata]9.9e-10083.67Show/hide
Query:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG
        +RTVRVTN+SLSA+EKDLR+FFSFSGEIE VEMRKD+++SQ+AFVTFKD KGAETSILLSGATI DQPVSI SAPDY+LPA  A S P+PVSSP+AEN G
Subjt:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG

Query:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTAGTAIMS
        S T+GSAM KAEDVVSSMLAKGFTLGKDALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKIS+GTTVVNEKVKEMDEKFQVSEKTKAAV+ AGTA+M+
Subjt:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTAGTAIMS

Query:  NRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGSS
        NRYVS GASWV+QTFQRVAK AVEVS KTKEKVLAEDQ K  G S
Subjt:  NRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGSS

XP_023007523.1 binding partner of ACD11 1-like [Cucurbita maxima]6.9e-10184.08Show/hide
Query:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG
        +RTVRVTN+SLSA+EKDLR+FFSFSGEIEFVEMRKD+++SQ+AFVTFKD KGAETSILLSGATI DQPVSI +APDYNLPA  A S P+PVSSP+AEN G
Subjt:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG

Query:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTAGTAIMS
        S T+GSAMQKAEDVVSSMLAKGFTLGKD LN+AKSFD++HQLTSTASSKV SLDQKIGLSEKIS+GTTVVNEKVKEMDEKFQVSEKTKAAV+ AGTA+M+
Subjt:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTAGTAIMS

Query:  NRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGSS
        NRYVS GASWV+QTFQRVAK AVEVS KTKEKVLAEDQ K  G S
Subjt:  NRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGSS

XP_023533747.1 binding partner of ACD11 1-like [Cucurbita pepo subsp. pepo]5.3e-10184.49Show/hide
Query:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG
        +RTVRVTN+SLSA+EKDLR+FFSFSGEIEFVEMRKD+++SQ+AFVTFKD KGAETSILLSGATI DQPVSI SAPDY+LPA  A S P+PVSSP+AEN G
Subjt:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG

Query:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTAGTAIMS
        S T+GSAMQKAEDVVSSMLAKGFTLGKDALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKIS+GTTVVNEKVKEMDEKFQVSEKTKAAV+ AGTA+M+
Subjt:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTAGTAIMS

Query:  NRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGSS
        NRYVS GASWV+QTFQRVAK AVEVS KTKEKVLAEDQ K  G S
Subjt:  NRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGSS

XP_038900617.1 binding partner of ACD11 1-like isoform X1 [Benincasa hispida]3.4e-10084.13Show/hide
Query:  MAMRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPI--PVSSPTA
        MAMRTVRVTN+SLS  EKDLR+FFSFSGEIEFVEMRKD ++SQ+AFVTFKD KGAETSILLSGATI DQPVSI SAPDYNLPA  A S P+  PVS+P  
Subjt:  MAMRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPI--PVSSPTA

Query:  E--NRGSDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTA
        +  N G+ T+GSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKIS+GTTVVNEKV+EMDEKFQVSEKTKAAVS A
Subjt:  E--NRGSDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTA

Query:  GTAIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGSSS
        G+AIM+NRYV  GASWVSQTFQRVAK AV+VSQKTKEKVL EDQGK VG+SS
Subjt:  GTAIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGSSS

TrEMBL top hitse value%identityAlignment
A0A0A0LRG1 RRM domain-containing protein9.1e-9983.4Show/hide
Query:  MAMRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSG-PIPVSSPTAE
        MA RTVRVTN+SLSA EKDLR+FFSFSGEIEFVEMR D+++SQ+AFVTFKDSKGAETSILLSGATI DQPVSI+SAPDYNLPA  A +   +PVS+P  +
Subjt:  MAMRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSG-PIPVSSPTAE

Query:  NRGS---DTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTA
        N  S    T+GSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKIS+GTTVVNEKV+EMDEKFQVSEKTKAAVS A
Subjt:  NRGS---DTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTA

Query:  GTAIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLA-EDQGKPVGSSS
        G+AIM+NRYV  GASWVSQTFQRVAK AV+VSQKTKEKVLA EDQGK VG+SS
Subjt:  GTAIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLA-EDQGKPVGSSS

A0A6J1D4M6 binding partner of ACD11 1-like isoform X21.4e-9984.96Show/hide
Query:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG
        +RTVRV N+SLSA EKDLR+FFSFSGEIEFVEMRKD ++SQVAFVTFKDSKGAETSILLSGATI DQPVSITS PDYNLPAAAA S P+ VS+P  EN G
Subjt:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG

Query:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTAGTAIMS
        S T+GSAM+KAEDVVSSMLAKGF+LGKDALNKAKSFDERHQLTSTAS KVASLDQKIGLSEKIS+GTTVVNE+V++MDEKFQVSEKTKAAVSTAG+AIM+
Subjt:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTAGTAIMS

Query:  NRYVSNGASWVSQTFQRVAKKAVEVSQKTKEK-VLAEDQGKPVGSS
        NRYVS GASWV++ FQRVAK AVEVSQKTKEK VLAEDQGK VG+S
Subjt:  NRYVSNGASWVSQTFQRVAKKAVEVSQKTKEK-VLAEDQGKPVGSS

A0A6J1D4Q0 binding partner of ACD11 1-like isoform X11.4e-9984.96Show/hide
Query:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG
        +RTVRV N+SLSA EKDLR+FFSFSGEIEFVEMRKD ++SQVAFVTFKDSKGAETSILLSGATI DQPVSITS PDYNLPAAAA S P+ VS+P  EN G
Subjt:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG

Query:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTAGTAIMS
        S T+GSAM+KAEDVVSSMLAKGF+LGKDALNKAKSFDERHQLTSTAS KVASLDQKIGLSEKIS+GTTVVNE+V++MDEKFQVSEKTKAAVSTAG+AIM+
Subjt:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTAGTAIMS

Query:  NRYVSNGASWVSQTFQRVAKKAVEVSQKTKEK-VLAEDQGKPVGSS
        NRYVS GASWV++ FQRVAK AVEVSQKTKEK VLAEDQGK VG+S
Subjt:  NRYVSNGASWVSQTFQRVAKKAVEVSQKTKEK-VLAEDQGKPVGSS

A0A6J1G681 binding partner of ACD11 1-like4.8e-10083.67Show/hide
Query:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG
        +RTVRVTN+SLSA+EKDLR+FFSFSGEIE VEMRKD+++SQ+AFVTFKD KGAETSILLSGATI DQPVSI SAPDY+LPA  A S P+PVSSP+AEN G
Subjt:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG

Query:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTAGTAIMS
        S T+GSAM KAEDVVSSMLAKGFTLGKDALN+AKSFD++HQLTSTASSKV SLDQKIGLSEKIS+GTTVVNEKVKEMDEKFQVSEKTKAAV+ AGTA+M+
Subjt:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTAGTAIMS

Query:  NRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGSS
        NRYVS GASWV+QTFQRVAK AVEVS KTKEKVLAEDQ K  G S
Subjt:  NRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGSS

A0A6J1L7W4 binding partner of ACD11 1-like3.3e-10184.08Show/hide
Query:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG
        +RTVRVTN+SLSA+EKDLR+FFSFSGEIEFVEMRKD+++SQ+AFVTFKD KGAETSILLSGATI DQPVSI +APDYNLPA  A S P+PVSSP+AEN G
Subjt:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG

Query:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTAGTAIMS
        S T+GSAMQKAEDVVSSMLAKGFTLGKD LN+AKSFD++HQLTSTASSKV SLDQKIGLSEKIS+GTTVVNEKVKEMDEKFQVSEKTKAAV+ AGTA+M+
Subjt:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTAGTAIMS

Query:  NRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGSS
        NRYVS GASWV+QTFQRVAK AVEVS KTKEKVLAEDQ K  G S
Subjt:  NRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGSS

SwissProt top hitse value%identityAlignment
P87216 Protein vip11.6e-0423.39Show/hide
Query:  VRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRGSDT
        V VTN+S    EK + +FFSF G++  +   K  + +Q A + F+     +T++LL  A +    + ITS           D G    ++ T +  G+  
Subjt:  VRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRGSDT

Query:  SGSAMQKAED---VVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTV-VNEKVKEMDEKFQVSEK---TKAAVSTAGT
          +A Q+ +    ++S +L++G+ L    L K+   D+ + ++S     + S      LS   S+     V EK  E+D KF +S+K   T + VST   
Subjt:  SGSAMQKAED---VVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTV-VNEKVKEMDEKFQVSEK---TKAAVSTAGT

Query:  AIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGS
          +     ++    V   ++    + + +  + +    A++Q +   S
Subjt:  AIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGS

Q9LFD5 Binding partner of ACD11 14.7e-6054.58Show/hide
Query:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG
        +R+V+V NLS  A E D++EFFSFSGE+E ++++ ++     A+VTFK+++GAET++LLSGA+IADQ V I  AP+Y+ PAA           P AE + 
Subjt:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG

Query:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKA-------AVST
        S    S +QKAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK+        VS+
Subjt:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKA-------AVST

Query:  AGTAIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGS
        AG+A+M NRYV  G SW +  F RVA+ A EV QKTKEKV AE   +P  S
Subjt:  AGTAIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGS

Arabidopsis top hitse value%identityAlignment
AT4G17720.1 RNA-binding (RRM/RBD/RNP motifs) family protein5.0e-6556.4Show/hide
Query:  MAMRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAEN
        M M TV+V+N+SL A ++DL+EFFSFSG+I ++E + + +++++A+VTFKD +GAET++LLSGATI D  V ++ APDY L   A  S       P   N
Subjt:  MAMRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAEN

Query:  RGSDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAA-------V
        +      S ++KAEDVVSSMLAKGF LGKDA+ KAKS DE+HQLTSTAS+KVAS D+KIG ++KI+ GT VV EKV+E+D+K+QVSEKTK+A       V
Subjt:  RGSDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAA-------V

Query:  STAGTAIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKV-LAEDQGK
        S AG+AIM NRYV  GA+WV+  F +VAK A EV QK KEKV +AE++ K
Subjt:  STAGTAIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKV-LAEDQGK

AT5G16840.1 binding partner of acd11 13.3e-6154.58Show/hide
Query:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG
        +R+V+V NLS  A E D++EFFSFSGE+E ++++ ++     A+VTFK+++GAET++LLSGA+IADQ V I  AP+Y+ PAA           P AE + 
Subjt:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG

Query:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKA-------AVST
        S    S +QKAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK+        VS+
Subjt:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKA-------AVST

Query:  AGTAIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGS
        AG+A+M NRYV  G SW +  F RVA+ A EV QKTKEKV AE   +P  S
Subjt:  AGTAIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGS

AT5G16840.2 binding partner of acd11 18.7e-6254.98Show/hide
Query:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG
        +R+V+V NLS  A E D++EFFSFSGE+E ++++  ++ S  A+VTFK+++GAET++LLSGA+IADQ V I  AP+Y+ PAA           P AE + 
Subjt:  MRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRG

Query:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKA-------AVST
        S    S +QKAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK+        VS+
Subjt:  SDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKA-------AVST

Query:  AGTAIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGS
        AG+A+M NRYV  G SW +  F RVA+ A EV QKTKEKV AE   +P  S
Subjt:  AGTAIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGS

AT5G16840.3 binding partner of acd11 13.9e-6254.94Show/hide
Query:  MAMRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAEN
        MA+R+V+V NLS  A E D++EFFSFSGE+E ++++ ++     A+VTFK+++GAET++LLSGA+IADQ V I  AP+Y+ PAA           P AE 
Subjt:  MAMRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAEN

Query:  RGSDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKA-------AV
        + S    S +QKAEDVVSSMLAKGF LGKDA+ KAK+FDE+H  TSTA++ VASLDQKIGLS+K++ GT++VNEK+K +D+ FQV+E+TK+        V
Subjt:  RGSDTSGSAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKA-------AV

Query:  STAGTAIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGS
        S+AG+A+M NRYV  G SW +  F RVA+ A EV QKTKEKV AE   +P  S
Subjt:  STAGTAIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKVLAEDQGKPVGS

AT5G46870.1 RNA-binding (RRM/RBD/RNP motifs) family protein6.5e-6556.18Show/hide
Query:  MAMRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAEN
        M+M TV+V+N+SL A E+DL+EFFSFSG+I ++E + ++D S++A+VTFKD +GAET++LL+G+TI D  V++T +PDY LP  A  S    + S    N
Subjt:  MAMRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAEN

Query:  RGSDTSG---SAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAA-----
        + S  +    S  +KAEDVVS M++KGF LGKDA+ KAKS DE+HQLTSTAS++V S D++IG +EKI+ GTTVV+EKVKE+D+KFQV+EKTK+A     
Subjt:  RGSDTSG---SAMQKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAA-----

Query:  --VSTAGTAIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKV-LAEDQ
          VS AG+AIM NRYV  GA+WV+  F RV+K A EV QK KEKV LAE++
Subjt:  --VSTAGTAIMSNRYVSNGASWVSQTFQRVAKKAVEVSQKTKEKV-LAEDQ


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGATGAGAACGGTGAGGGTTACCAATCTCTCGTTGAGCGCTGCGGAGAAAGATTTGAGAGAGTTTTTTTCTTTTTCCGGTGAAATTGAATTTGTCGAAATGCGAAA
GGATGATGACAAATCTCAAGTTGCATTTGTTACCTTCAAGGATTCGAAAGGGGCAGAGACGTCGATTCTGCTCTCGGGAGCTACAATTGCTGATCAGCCCGTTAGCATTA
CTTCCGCCCCAGATTACAACCTTCCTGCTGCTGCTGCTGACAGTGGCCCTATACCAGTGTCTTCTCCAACTGCTGAAAACAGAGGATCTGATACTTCTGGATCTGCAATG
CAAAAGGCAGAAGATGTTGTGAGCAGCATGCTGGCCAAAGGTTTTACTTTGGGCAAAGATGCCCTCAATAAGGCAAAGTCTTTTGATGAGAGGCATCAGCTGACATCGAC
AGCCTCATCGAAAGTCGCTTCTCTAGACCAAAAGATCGGCCTTAGCGAGAAGATTAGCATTGGCACGACGGTGGTGAATGAGAAAGTGAAAGAAATGGATGAAAAGTTTC
AAGTGTCTGAGAAGACCAAGGCAGCGGTGAGCACTGCAGGAACGGCCATAATGTCGAACCGCTATGTCTCAAACGGGGCTTCGTGGGTTTCCCAGACGTTTCAAAGAGTC
GCCAAAAAGGCTGTAGAGGTTAGCCAGAAAACAAAGGAGAAGGTCTTAGCTGAGGATCAAGGAAAACCTGTGGGAAGCTCTTCTTAA
mRNA sequenceShow/hide mRNA sequence
TGAAATTTGAAGGGAAAAAATAAAAATAAAAAAGGGTGTCAGTTTCATTTTTTGCCATCTTTATCTTTTACGAACCTATACAACCGCCAAGCCACAATTCCTCTCTCTCT
AAGAACTTCGGATTTGGAAATCTCTCAGGTGGATCAAACGGAGCATCATGGCGATGAGAACGGTGAGGGTTACCAATCTCTCGTTGAGCGCTGCGGAGAAAGATTTGAGA
GAGTTTTTTTCTTTTTCCGGTGAAATTGAATTTGTCGAAATGCGAAAGGATGATGACAAATCTCAAGTTGCATTTGTTACCTTCAAGGATTCGAAAGGGGCAGAGACGTC
GATTCTGCTCTCGGGAGCTACAATTGCTGATCAGCCCGTTAGCATTACTTCCGCCCCAGATTACAACCTTCCTGCTGCTGCTGCTGACAGTGGCCCTATACCAGTGTCTT
CTCCAACTGCTGAAAACAGAGGATCTGATACTTCTGGATCTGCAATGCAAAAGGCAGAAGATGTTGTGAGCAGCATGCTGGCCAAAGGTTTTACTTTGGGCAAAGATGCC
CTCAATAAGGCAAAGTCTTTTGATGAGAGGCATCAGCTGACATCGACAGCCTCATCGAAAGTCGCTTCTCTAGACCAAAAGATCGGCCTTAGCGAGAAGATTAGCATTGG
CACGACGGTGGTGAATGAGAAAGTGAAAGAAATGGATGAAAAGTTTCAAGTGTCTGAGAAGACCAAGGCAGCGGTGAGCACTGCAGGAACGGCCATAATGTCGAACCGCT
ATGTCTCAAACGGGGCTTCGTGGGTTTCCCAGACGTTTCAAAGAGTCGCCAAAAAGGCTGTAGAGGTTAGCCAGAAAACAAAGGAGAAGGTCTTAGCTGAGGATCAAGGA
AAACCTGTGGGAAGCTCTTCTTAAGTCATCCAAGAATTGCTGCATTCCAAATGTGTGCCCTGACCCATATCCCTATAAATGTTTGGCTAAAACAATGCAAGTGAGGACCT
ATGTCTTGCTATTTTCATGATATATATATATATATTTTCAATGCTTTATTTTAGTTTTTAGTTTTAGGGAGTATACAAATAAGCTACATGCTAATGTTTTAATTCAACTG
TAAGAAATCATATATGCTATGTGGTGAAGTATCCAGAAATGAGACGGAAAAAAAACTATTATAGATGGAAAGCTGC
Protein sequenceShow/hide protein sequence
MAMRTVRVTNLSLSAAEKDLREFFSFSGEIEFVEMRKDDDKSQVAFVTFKDSKGAETSILLSGATIADQPVSITSAPDYNLPAAAADSGPIPVSSPTAENRGSDTSGSAM
QKAEDVVSSMLAKGFTLGKDALNKAKSFDERHQLTSTASSKVASLDQKIGLSEKISIGTTVVNEKVKEMDEKFQVSEKTKAAVSTAGTAIMSNRYVSNGASWVSQTFQRV
AKKAVEVSQKTKEKVLAEDQGKPVGSSS