| GenBank top hits | e value | %identity | Alignment |
|---|
| KAA0043669.1 pol protein [Cucumis melo var. makuwa] | 2.4e-50 | 58.49 | Show/hide |
Query: MLRACVLDFRAPGPDS-DS----MEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELLCSLTNGA-----------------------
MLRAC L+F PDS DS MEFAYNN Y++ MAPFEALY PV +EVG++R +GPEL+ S TN A
Subjt: MLRACVLDFRAPGPDS-DS----MEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELLCSLTNGA-----------------------
Query: KDLEFEVGQHVFLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG
KDLEFEVG VFLKVA M+GVLRF +RGKLSP FVGPFEILERIG VAYRLALPPSLS HVSMLR+YVPDPSH+VD+EPL+++E+LS+ E+PV
Subjt: KDLEFEVGQHVFLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG
Query: ILAFETKTLRNR
+LA E KTLRN+
Subjt: ILAFETKTLRNR
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| KAA0046937.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.1e-50 | 59.7 | Show/hide |
Query: MLRACVLDFRAPGPDS-DS----MEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELL------------CSLTNGAKDLEFEVGQHV
MLRAC L+F PDS DS MEFAYNN +++ MAPFEALY PV EVG++R +GPEL+ C LT +DLEF+VG V
Subjt: MLRACVLDFRAPGPDS-DS----MEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELL------------CSLTNGAKDLEFEVGQHV
Query: FLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGILAFETKTLRN
FLKVA M+GVLRF KRGKLSP FVGPFEILERIG VAYRLALPPSLS HVSMLR+YVPDPSH++D+EPL+++E+LS+ E+PV +LA E K LRN
Subjt: FLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGILAFETKTLRN
Query: R
R
Subjt: R
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| KAA0051522.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 1.4e-50 | 58.57 | Show/hide |
Query: MLRACVLDFRAPGP-DS--DSMEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELLCSLTNGA-----------------------KD
MLRAC L+F PG DS MEFAYNN Y++ M PFEALY PV+ EVG++R +GPEL+ S TN A KD
Subjt: MLRACVLDFRAPGP-DS--DSMEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELLCSLTNGA-----------------------KD
Query: LEFEVGQHVFLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGIL
LEFEVG VFLKVA MRGVLRF +RGKLSP FVGPFE+LERIG VAYRLALPPSLS HVSMLR+YVPDPSH+VD+EPL+++E+LS+ E+PVG+L
Subjt: LEFEVGQHVFLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGIL
Query: AFETKTLRNR
A E K LRNR
Subjt: AFETKTLRNR
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| KAA0060848.1 pol protein [Cucumis melo var. makuwa] | 2.4e-50 | 59.05 | Show/hide |
Query: MLRACVLDFRAPGP-DS--DSMEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELLCSLTNGA-----------------------KD
MLRAC L+F PG DS MEFAYNN Y++ MAPFEALY PV +EVG++R +GPEL+ S TN A KD
Subjt: MLRACVLDFRAPGP-DS--DSMEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELLCSLTNGA-----------------------KD
Query: LEFEVGQHVFLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGIL
LEFEVG VFLKVA MRGVLRF KRGKLSP FVGPFEILERIG VAYRLALPPSL+ HVSMLR+YVPDPSH+VD+EPL+++E++S+ E+PV IL
Subjt: LEFEVGQHVFLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGIL
Query: AFETKTLRNR
A E KTLRN+
Subjt: AFETKTLRNR
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| TYK03215.1 ty3-gypsy retrotransposon protein [Cucumis melo var. makuwa] | 4.1e-50 | 59.7 | Show/hide |
Query: MLRACVLDFRAPGPDS-DS----MEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELL------------CSLTNGAKDLEFEVGQHV
MLRAC L+F PDS DS MEFAYNN +++ MAPFEALY PV EVG++R +GPEL+ C LT +DLEF+VG V
Subjt: MLRACVLDFRAPGPDS-DS----MEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELL------------CSLTNGAKDLEFEVGQHV
Query: FLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGILAFETKTLRN
FLKVA M+GVLRF KRGKLSP FVGPFEILERIG VAYRLALPPSLS HVSMLR+YVPDPSH++D+EPL+++E+LS+ E+PV +LA E K LRN
Subjt: FLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGILAFETKTLRN
Query: R
R
Subjt: R
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A5A7TR61 Pol protein | 1.1e-50 | 58.49 | Show/hide |
Query: MLRACVLDFRAPGPDS-DS----MEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELLCSLTNGA-----------------------
MLRAC L+F PDS DS MEFAYNN Y++ MAPFEALY PV +EVG++R +GPEL+ S TN A
Subjt: MLRACVLDFRAPGPDS-DS----MEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELLCSLTNGA-----------------------
Query: KDLEFEVGQHVFLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG
KDLEFEVG VFLKVA M+GVLRF +RGKLSP FVGPFEILERIG VAYRLALPPSLS HVSMLR+YVPDPSH+VD+EPL+++E+LS+ E+PV
Subjt: KDLEFEVGQHVFLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVG
Query: ILAFETKTLRNR
+LA E KTLRN+
Subjt: ILAFETKTLRNR
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| A0A5A7TYE6 Ty3-gypsy retrotransposon protein | 2.0e-50 | 59.7 | Show/hide |
Query: MLRACVLDFRAPGPDS-DS----MEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELL------------CSLTNGAKDLEFEVGQHV
MLRAC L+F PDS DS MEFAYNN +++ MAPFEALY PV EVG++R +GPEL+ C LT +DLEF+VG V
Subjt: MLRACVLDFRAPGPDS-DS----MEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELL------------CSLTNGAKDLEFEVGQHV
Query: FLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGILAFETKTLRN
FLKVA M+GVLRF KRGKLSP FVGPFEILERIG VAYRLALPPSLS HVSMLR+YVPDPSH++D+EPL+++E+LS+ E+PV +LA E K LRN
Subjt: FLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGILAFETKTLRN
Query: R
R
Subjt: R
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| A0A5A7U6Z4 Ty3-gypsy retrotransposon protein | 6.7e-51 | 58.57 | Show/hide |
Query: MLRACVLDFRAPGP-DS--DSMEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELLCSLTNGA-----------------------KD
MLRAC L+F PG DS MEFAYNN Y++ M PFEALY PV+ EVG++R +GPEL+ S TN A KD
Subjt: MLRACVLDFRAPGP-DS--DSMEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELLCSLTNGA-----------------------KD
Query: LEFEVGQHVFLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGIL
LEFEVG VFLKVA MRGVLRF +RGKLSP FVGPFE+LERIG VAYRLALPPSLS HVSMLR+YVPDPSH+VD+EPL+++E+LS+ E+PVG+L
Subjt: LEFEVGQHVFLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGIL
Query: AFETKTLRNR
A E K LRNR
Subjt: AFETKTLRNR
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| A0A5A7UZZ4 Pol protein | 1.1e-50 | 59.05 | Show/hide |
Query: MLRACVLDFRAPGP-DS--DSMEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELLCSLTNGA-----------------------KD
MLRAC L+F PG DS MEFAYNN Y++ MAPFEALY PV +EVG++R +GPEL+ S TN A KD
Subjt: MLRACVLDFRAPGP-DS--DSMEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELLCSLTNGA-----------------------KD
Query: LEFEVGQHVFLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGIL
LEFEVG VFLKVA MRGVLRF KRGKLSP FVGPFEILERIG VAYRLALPPSL+ HVSMLR+YVPDPSH+VD+EPL+++E++S+ E+PV IL
Subjt: LEFEVGQHVFLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGIL
Query: AFETKTLRNR
A E KTLRN+
Subjt: AFETKTLRNR
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| A0A5D3BVX1 Ty3-gypsy retrotransposon protein | 2.0e-50 | 59.7 | Show/hide |
Query: MLRACVLDFRAPGPDS-DS----MEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELL------------CSLTNGAKDLEFEVGQHV
MLRAC L+F PDS DS MEFAYNN +++ MAPFEALY PV EVG++R +GPEL+ C LT +DLEF+VG V
Subjt: MLRACVLDFRAPGPDS-DS----MEFAYNNDYRSRRFEMAPFEALY--ALSVPVFREEVGDRRFLGPELL------------CSLTNGAKDLEFEVGQHV
Query: FLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGILAFETKTLRN
FLKVA M+GVLRF KRGKLSP FVGPFEILERIG VAYRLALPPSLS HVSMLR+YVPDPSH++D+EPL+++E+LS+ E+PV +LA E K LRN
Subjt: FLKVASMRGVLRFGKRGKLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQYVPDPSHIVDFEPLQLNEDLSFEEKPVGILAFETKTLRN
Query: R
R
Subjt: R
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P0CT34 Transposon Tf2-1 polyprotein | 4.1e-05 | 30.34 | Show/hide |
Query: AYNNDYRSRRFEMAPFE-------ALYALSVPVFREEVGDRRFLGPELLCSL-----TNGAK-----DL------EFEVGQHVFLKVASMRGVLRFGKRG
+YNN S +M PFE AL L +P F ++ + ++ ++ TN K D+ EF+ G V +K + G L K
Subjt: AYNNDYRSRRFEMAPFE-------ALYALSVPVFREEVGDRRFLGPELLCSL-----TNGAK-----DL------EFEVGQHVFLKVASMRGVLRFGKRG
Query: KLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQY
KL+P F GPF +L++ G Y L LP S+ + HVS L +Y
Subjt: KLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQY
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| P0CT35 Transposon Tf2-2 polyprotein | 4.1e-05 | 30.34 | Show/hide |
Query: AYNNDYRSRRFEMAPFE-------ALYALSVPVFREEVGDRRFLGPELLCSL-----TNGAK-----DL------EFEVGQHVFLKVASMRGVLRFGKRG
+YNN S +M PFE AL L +P F ++ + ++ ++ TN K D+ EF+ G V +K + G L K
Subjt: AYNNDYRSRRFEMAPFE-------ALYALSVPVFREEVGDRRFLGPELLCSL-----TNGAK-----DL------EFEVGQHVFLKVASMRGVLRFGKRG
Query: KLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQY
KL+P F GPF +L++ G Y L LP S+ + HVS L +Y
Subjt: KLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQY
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| P0CT36 Transposon Tf2-3 polyprotein | 4.1e-05 | 30.34 | Show/hide |
Query: AYNNDYRSRRFEMAPFE-------ALYALSVPVFREEVGDRRFLGPELLCSL-----TNGAK-----DL------EFEVGQHVFLKVASMRGVLRFGKRG
+YNN S +M PFE AL L +P F ++ + ++ ++ TN K D+ EF+ G V +K + G L K
Subjt: AYNNDYRSRRFEMAPFE-------ALYALSVPVFREEVGDRRFLGPELLCSL-----TNGAK-----DL------EFEVGQHVFLKVASMRGVLRFGKRG
Query: KLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQY
KL+P F GPF +L++ G Y L LP S+ + HVS L +Y
Subjt: KLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQY
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| P0CT41 Transposon Tf2-12 polyprotein | 4.1e-05 | 30.34 | Show/hide |
Query: AYNNDYRSRRFEMAPFE-------ALYALSVPVFREEVGDRRFLGPELLCSL-----TNGAK-----DL------EFEVGQHVFLKVASMRGVLRFGKRG
+YNN S +M PFE AL L +P F ++ + ++ ++ TN K D+ EF+ G V +K + G L K
Subjt: AYNNDYRSRRFEMAPFE-------ALYALSVPVFREEVGDRRFLGPELLCSL-----TNGAK-----DL------EFEVGQHVFLKVASMRGVLRFGKRG
Query: KLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQY
KL+P F GPF +L++ G Y L LP S+ + HVS L +Y
Subjt: KLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQY
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| Q9UR07 Transposon Tf2-11 polyprotein | 4.1e-05 | 30.34 | Show/hide |
Query: AYNNDYRSRRFEMAPFE-------ALYALSVPVFREEVGDRRFLGPELLCSL-----TNGAK-----DL------EFEVGQHVFLKVASMRGVLRFGKRG
+YNN S +M PFE AL L +P F ++ + ++ ++ TN K D+ EF+ G V +K + G L K
Subjt: AYNNDYRSRRFEMAPFE-------ALYALSVPVFREEVGDRRFLGPELLCSL-----TNGAK-----DL------EFEVGQHVFLKVASMRGVLRFGKRG
Query: KLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQY
KL+P F GPF +L++ G Y L LP S+ + HVS L +Y
Subjt: KLSPCFVGPFEILERIGRVAYRLALPPSLSADCTKQLHVSMLRQY
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