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Sed0019844 (gene) of Chayote v1 genome

Gene IDSed0019844
OrganismSechium edule (Chayote v1)
DescriptionCLAVATA3/ESR (CLE)-related protein 17-like
Genome locationLG03:6916407..6916661
RNA-Seq ExpressionSed0019844
SyntenySed0019844
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6601877.1 CLAVATA3/ESR (CLE)-related protein 16, partial [Cucurbita argyrosperma subsp. sororia]1.1e-1052.94Show/hide
Query:  TATTAAAALLFLLWVVFILAPVSLCLHLPPPPPTS--------TSLSD-------LFHRRISVTGAAANGDDKRLIHTGPNPLHN
        +A T A A L   WV+ I  P +LCLHLPPPPPTS         SLS        L HR  S   AA   DDKRLIHTGPNPLHN
Subjt:  TATTAAAALLFLLWVVFILAPVSLCLHLPPPPPTS--------TSLSD-------LFHRRISVTGAAANGDDKRLIHTGPNPLHN

KAG7016766.1 hypothetical protein SDJN02_21876, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-1353.47Show/hide
Query:  MTVRTRTCSRHRTGTATTAAAALLFLLWVVFILAP--VSLCLHLPPPP--------------PTSTSLSDLFHRRISVTG-AAANGDDKRLIHTGPNPLH
        M VRT TCSRH  G  TT   AL+  LWV+ ILAP   +LC  LPP P              P +TS ++L HRR S  G AAA GD+KRLIHTGPNPLH
Subjt:  MTVRTRTCSRHRTGTATTAAAALLFLLWVVFILAP--VSLCLHLPPPP--------------PTSTSLSDLFHRRISVTG-AAANGDDKRLIHTGPNPLH

Query:  N
        N
Subjt:  N

KAG7032578.1 hypothetical protein SDJN02_06627, partial [Cucurbita argyrosperma subsp. argyrosperma]4.2e-1051.16Show/hide
Query:  TATTAAAALLFLLWVVFILAPVSLCLHLPPPPPTS--------------TSLSDLFHRRISVTGAAA--NGDDKRLIHTGPNPLHN
        +A T A A L   WV+ I  P +LCLHLPPPPPTS              TS  +L H R +   AAA    DDKRLIHTGPNPLHN
Subjt:  TATTAAAALLFLLWVVFILAPVSLCLHLPPPPPTS--------------TSLSDLFHRRISVTGAAA--NGDDKRLIHTGPNPLHN

XP_008437694.1 PREDICTED: CLAVATA3/ESR (CLE)-related protein 17-like [Cucumis melo]3.8e-1148.54Show/hide
Query:  MTVRTRTCSRHRTGTATTAAAALLFLLWVVFILAPVSLCLHLPPPPP-------------------TSTSLSDLFHRRISVTGAAANGDDKRLIHTGPNP
        MT +T T SRHR    T    ALL   WV+ ILAP +LCLHLPPPPP                   T+TS ++L  RR     A+A  +DKRLIHTGPNP
Subjt:  MTVRTRTCSRHRTGTATTAAAALLFLLWVVFILAPVSLCLHLPPPPP-------------------TSTSLSDLFHRRISVTGAAANGDDKRLIHTGPNP

Query:  LHN
        LHN
Subjt:  LHN

XP_011656246.1 CLAVATA3/ESR (CLE)-related protein 17 [Cucumis sativus]2.0e-1248.54Show/hide
Query:  MTVRTRTCSRHRTGTATTAAAALLFLLWVVFILAPVSLCLHLPPPPP-------------------TSTSLSDLFHRRISVTGAAANGDDKRLIHTGPNP
        MT  T T SRHR    T    AL    WV+ I AP +LCLHLPPPPP                   T+TS ++LF R  S   AAA G++KRLIHTGPNP
Subjt:  MTVRTRTCSRHRTGTATTAAAALLFLLWVVFILAPVSLCLHLPPPPP-------------------TSTSLSDLFHRRISVTGAAANGDDKRLIHTGPNP

Query:  LHN
        LHN
Subjt:  LHN

TrEMBL top hitse value%identityAlignment
A0A0A0KSY2 Uncharacterized protein9.8e-1348.54Show/hide
Query:  MTVRTRTCSRHRTGTATTAAAALLFLLWVVFILAPVSLCLHLPPPPP-------------------TSTSLSDLFHRRISVTGAAANGDDKRLIHTGPNP
        MT  T T SRHR    T    AL    WV+ I AP +LCLHLPPPPP                   T+TS ++LF R  S   AAA G++KRLIHTGPNP
Subjt:  MTVRTRTCSRHRTGTATTAAAALLFLLWVVFILAPVSLCLHLPPPPP-------------------TSTSLSDLFHRRISVTGAAANGDDKRLIHTGPNP

Query:  LHN
        LHN
Subjt:  LHN

A0A1S3AUM2 CLAVATA3/ESR (CLE)-related protein 17-like1.8e-1148.54Show/hide
Query:  MTVRTRTCSRHRTGTATTAAAALLFLLWVVFILAPVSLCLHLPPPPP-------------------TSTSLSDLFHRRISVTGAAANGDDKRLIHTGPNP
        MT +T T SRHR    T    ALL   WV+ ILAP +LCLHLPPPPP                   T+TS ++L  RR     A+A  +DKRLIHTGPNP
Subjt:  MTVRTRTCSRHRTGTATTAAAALLFLLWVVFILAPVSLCLHLPPPPP-------------------TSTSLSDLFHRRISVTGAAANGDDKRLIHTGPNP

Query:  LHN
        LHN
Subjt:  LHN

A0A5A7TY55 CLAVATA3/ESR (CLE)-related protein 17-like1.8e-1148.54Show/hide
Query:  MTVRTRTCSRHRTGTATTAAAALLFLLWVVFILAPVSLCLHLPPPPP-------------------TSTSLSDLFHRRISVTGAAANGDDKRLIHTGPNP
        MT +T T SRHR    T    ALL   WV+ ILAP +LCLHLPPPPP                   T+TS ++L  RR     A+A  +DKRLIHTGPNP
Subjt:  MTVRTRTCSRHRTGTATTAAAALLFLLWVVFILAPVSLCLHLPPPPP-------------------TSTSLSDLFHRRISVTGAAANGDDKRLIHTGPNP

Query:  LHN
        LHN
Subjt:  LHN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G70895.1 CLAVATA3/ESR-RELATED 177.4e-0546.94Show/hide
Query:  LHL----PPPPPTSTSLSDLFHRRISVTGAAANGDDKRLIHTGPNPLHN
        LHL    PPPPP           R  ++     GDDKR++HTGPNPLHN
Subjt:  LHL----PPPPPTSTSLSDLFHRRISVTGAAANGDDKRLIHTGPNPLHN

AT1G70895.2 CLAVATA3/ESR-RELATED 177.4e-0546.94Show/hide
Query:  LHL----PPPPPTSTSLSDLFHRRISVTGAAANGDDKRLIHTGPNPLHN
        LHL    PPPPP           R  ++     GDDKR++HTGPNPLHN
Subjt:  LHL----PPPPPTSTSLSDLFHRRISVTGAAANGDDKRLIHTGPNPLHN


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAGTACGAACCCGGACCTGCAGTCGCCACCGCACCGGAACCGCCACCACCGCCGCTGCCGCTCTTCTTTTCTTATTATGGGTCGTTTTCATTTTAGCTCCGGTCAG
TCTCTGTCTCCACCTACCCCCGCCACCGCCGACTTCCACTTCCCTGTCTGACCTCTTTCACCGTCGTATCTCAGTCACCGGCGCCGCCGCTAACGGCGACGACAAGCGGT
TAATCCATACGGGTCCGAATCCTCTTCATAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAGTACGAACCCGGACCTGCAGTCGCCACCGCACCGGAACCGCCACCACCGCCGCTGCCGCTCTTCTTTTCTTATTATGGGTCGTTTTCATTTTAGCTCCGGTCAG
TCTCTGTCTCCACCTACCCCCGCCACCGCCGACTTCCACTTCCCTGTCTGACCTCTTTCACCGTCGTATCTCAGTCACCGGCGCCGCCGCTAACGGCGACGACAAGCGGT
TAATCCATACGGGTCCGAATCCTCTTCATAATTAA
Protein sequenceShow/hide protein sequence
MTVRTRTCSRHRTGTATTAAAALLFLLWVVFILAPVSLCLHLPPPPPTSTSLSDLFHRRISVTGAAANGDDKRLIHTGPNPLHN