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Sed0019847 (gene) of Chayote v1 genome

Gene IDSed0019847
OrganismSechium edule (Chayote v1)
Descriptionthioredoxin-like protein Clot
Genome locationLG04:38386420..38388471
RNA-Seq ExpressionSed0019847
SyntenySed0019847
Gene Ontology termsGO:0098869 - cellular oxidant detoxification (biological process)
GO:0005829 - cytosol (cellular component)
GO:0004601 - peroxidase activity (molecular function)
GO:0047134 - protein-disulfide reductase activity (molecular function)
InterPro domainsIPR010357 - Thioredoxin domain-containing protein 17-like domain
IPR036249 - Thioredoxin-like superfamily
IPR045108 - Thioredoxin domain-containing protein 17-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581598.1 O-fucosyltransferase 20, partial [Cucurbita argyrosperma subsp. sororia]5.2e-6388.55Show/hide
Query:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP
        MP+KL DATVS+F+ VFDKFRS+LPN+KANFILFLAD DPSTSLSWCPDCVRAEPVI+KKLE+ASDDIALLRAYVGDRPTWRN  HPWRVDSRFKLTGVP
Subjt:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP

Query:  TLIRWEENDKISGRLEDHEAHVERKIDALIA
        TL+RWE NDKISGRLEDHEAHVE+KIDALIA
Subjt:  TLIRWEENDKISGRLEDHEAHVERKIDALIA

XP_011651794.1 thioredoxin-like protein Clot isoform X2 [Cucumis sativus]1.5e-6286.47Show/hide
Query:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP
        MP+K++DATVS+FS VFDKFRS+LPN+KANFILFLAD DPSTS SWCPDCVRAEPVI+KKLE+ASDDIALLRAYVGDRPTWRN  HPWRVD RFKLTGVP
Subjt:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP

Query:  TLIRWEENDKISGRLEDHEAHVERKIDALIAAQ
        TL+RWEENDKISGRLEDHEAHVE KIDALIA +
Subjt:  TLIRWEENDKISGRLEDHEAHVERKIDALIAAQ

XP_022934040.1 thioredoxin-like protein Clot [Cucurbita moschata]1.5e-6287.79Show/hide
Query:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP
        MP+KL DA+VS+F+ VFDKFRS+LPN+KANFILFLAD DPSTSLSWCPDCVRAEPVI+KKLE+ASDDIALLRAYVGDRPTWRN  HPWRVDSRFKLTGVP
Subjt:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP

Query:  TLIRWEENDKISGRLEDHEAHVERKIDALIA
        TL+RWE NDKISGRLEDHEAHVE+KIDALIA
Subjt:  TLIRWEENDKISGRLEDHEAHVERKIDALIA

XP_022983629.1 thioredoxin-like protein Clot [Cucurbita maxima]5.2e-6388.55Show/hide
Query:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP
        MP+KL DATVS+F+ VFDKFRS+LPN+KANFILFLAD DPSTSLSWCPDCVRAEPVI+KKLE+ASDDIALLRAYVGDRPTWRN  HPWRVDSRFKLTGVP
Subjt:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP

Query:  TLIRWEENDKISGRLEDHEAHVERKIDALIA
        TL+RWE NDKISGRLEDHEAHVE+KIDALIA
Subjt:  TLIRWEENDKISGRLEDHEAHVERKIDALIA

XP_023526301.1 thioredoxin-like protein Clot [Cucurbita pepo subsp. pepo]1.5e-6287.79Show/hide
Query:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP
        MP+KL DATVS+F+ VFDKFRS+LPN+KANFILFLAD DPSTSLSWCPDCVRAEPVI+KKLE+AS+DIALLRAYVGDRPTWRN  HPWRVDSRFKLTGVP
Subjt:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP

Query:  TLIRWEENDKISGRLEDHEAHVERKIDALIA
        TL+RWE NDKISGRLEDHEAHVE+KIDALIA
Subjt:  TLIRWEENDKISGRLEDHEAHVERKIDALIA

TrEMBL top hitse value%identityAlignment
A0A0A0LEX6 DUF953 domain-containing protein7.3e-6386.47Show/hide
Query:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP
        MP+K++DATVS+FS VFDKFRS+LPN+KANFILFLAD DPSTS SWCPDCVRAEPVI+KKLE+ASDDIALLRAYVGDRPTWRN  HPWRVD RFKLTGVP
Subjt:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP

Query:  TLIRWEENDKISGRLEDHEAHVERKIDALIAAQ
        TL+RWEENDKISGRLEDHEAHVE KIDALIA +
Subjt:  TLIRWEENDKISGRLEDHEAHVERKIDALIAAQ

A0A1S4E462 thioredoxin-like protein Clot isoform X22.4e-6184.21Show/hide
Query:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP
        MP+K++DAT+S+F+ VFDKFRS LPN+KANFILFLAD DPSTS SWCPDCVRAEPVI+KKLE+ASDD ALLRAYVGDRPTWRN  HPWRVD RFKLTGVP
Subjt:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP

Query:  TLIRWEENDKISGRLEDHEAHVERKIDALIAAQ
        TL+RWEENDKISGRLEDHEAHVE KIDALIA +
Subjt:  TLIRWEENDKISGRLEDHEAHVERKIDALIAAQ

A0A6J1DI40 thioredoxin-like protein Clot4.7e-6284.96Show/hide
Query:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP
        MP+KLLDA  SNF+ VFDKFRS+LPN+KANFILFLADNDPSTSLSWCPDCVRAEP I++KLE+AS+DIALLRAYVGDRPTWRN  HPWRVDSRFKL GVP
Subjt:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP

Query:  TLIRWEENDKISGRLEDHEAHVERKIDALIAAQ
        TL+RW+ENDKISGRLEDHEAHVE+KIDALIA +
Subjt:  TLIRWEENDKISGRLEDHEAHVERKIDALIAAQ

A0A6J1F6J0 thioredoxin-like protein Clot7.3e-6387.79Show/hide
Query:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP
        MP+KL DA+VS+F+ VFDKFRS+LPN+KANFILFLAD DPSTSLSWCPDCVRAEPVI+KKLE+ASDDIALLRAYVGDRPTWRN  HPWRVDSRFKLTGVP
Subjt:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP

Query:  TLIRWEENDKISGRLEDHEAHVERKIDALIA
        TL+RWE NDKISGRLEDHEAHVE+KIDALIA
Subjt:  TLIRWEENDKISGRLEDHEAHVERKIDALIA

A0A6J1J7Z3 thioredoxin-like protein Clot2.5e-6388.55Show/hide
Query:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP
        MP+KL DATVS+F+ VFDKFRS+LPN+KANFILFLAD DPSTSLSWCPDCVRAEPVI+KKLE+ASDDIALLRAYVGDRPTWRN  HPWRVDSRFKLTGVP
Subjt:  MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVP

Query:  TLIRWEENDKISGRLEDHEAHVERKIDALIA
        TL+RWE NDKISGRLEDHEAHVE+KIDALIA
Subjt:  TLIRWEENDKISGRLEDHEAHVERKIDALIA

SwissProt top hitse value%identityAlignment
Q5REA8 Thioredoxin domain-containing protein 175.3e-1034.02Show/hide
Query:  FDKFRSDLPNH--KANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVPTLIRWEENDKI
        F++F   +  H  K  F  F    D +   SWCPDCV+AEPV+ + L+  S+    +   VG++P W++  + +R     K+T VPTLI++    K+
Subjt:  FDKFRSDLPNH--KANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVPTLIRWEENDKI

Q5Z9Z3 Thioredoxin-like protein Clot2.8e-3552.9Show/hide
Query:  MPVKLLDATVSNFSTVFDKF--RSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESAS----DDIALLRAYVGDRPTWRNALHPWRVDSRF
        M V+ +DATV++F   FDK     D    K   +LFLAD D S++ +WCPDC  AEPVI+ ++E+A+     D+ LLRAYVGD+PTWR+  HPWR D RF
Subjt:  MPVKLLDATVSNFSTVFDKF--RSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESAS----DDIALLRAYVGDRPTWRNALHPWRVDSRF

Query:  KLTGVPTLIRWEENDKISGRLEDHEAHVERKIDALIAA
        +LTGVPTLIRW EN   + RL D EAH+  K+DA++ A
Subjt:  KLTGVPTLIRWEENDKISGRLEDHEAHVERKIDALIAA

Q6DBT3 Thioredoxin domain-containing protein 171.1e-1039.29Show/hide
Query:  KANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVPTLIRWEENDKI
        K  F  F  D D     SWCPDCV+AEPV+  +L    +    +   VGDRP W+++ + ++     KLTGVPTL+R+    K+
Subjt:  KANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVPTLIRWEENDKI

Q9CQM5 Thioredoxin domain-containing protein 172.8e-1132.29Show/hide
Query:  FDKFRSDLPNHKANFIL-FLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVPTLIRWEENDKI
        F++F   +  H+   I  + + +  +   SWCPDCV AEPVI + L+  ++D   +   VGD+P W++  + +R   + K+T VPTL+++    K+
Subjt:  FDKFRSDLPNHKANFIL-FLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVPTLIRWEENDKI

Q9FMN4 Thioredoxin-like protein Clot2.6e-4159.09Show/hide
Query:  MPVKLLDATVSNFSTVFDKFRSD-LPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGV
        M +K +DA  S   +   + +SD     K NFILFLADNDP+T  SWCPDCVRAEPVI+K LE   +++ L+RAY GDRPTWR   HPWRVDSRFKLTGV
Subjt:  MPVKLLDATVSNFSTVFDKFRSD-LPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGV

Query:  PTLIRWEENDKISGRLEDHEAHVERKIDALIA
        PTL+RW + D + GRLEDH+AH+   I  L+A
Subjt:  PTLIRWEENDKISGRLEDHEAHVERKIDALIA

Arabidopsis top hitse value%identityAlignment
AT5G42850.1 Thioredoxin superfamily protein1.9e-4259.09Show/hide
Query:  MPVKLLDATVSNFSTVFDKFRSD-LPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGV
        M +K +DA  S   +   + +SD     K NFILFLADNDP+T  SWCPDCVRAEPVI+K LE   +++ L+RAY GDRPTWR   HPWRVDSRFKLTGV
Subjt:  MPVKLLDATVSNFSTVFDKFRSD-LPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGV

Query:  PTLIRWEENDKISGRLEDHEAHVERKIDALIA
        PTL+RW + D + GRLEDH+AH+   I  L+A
Subjt:  PTLIRWEENDKISGRLEDHEAHVERKIDALIA

AT5G42850.2 Thioredoxin superfamily protein1.9e-4259.09Show/hide
Query:  MPVKLLDATVSNFSTVFDKFRSD-LPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGV
        M +K +DA  S   +   + +SD     K NFILFLADNDP+T  SWCPDCVRAEPVI+K LE   +++ L+RAY GDRPTWR   HPWRVDSRFKLTGV
Subjt:  MPVKLLDATVSNFSTVFDKFRSD-LPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGV

Query:  PTLIRWEENDKISGRLEDHEAHVERKIDALIA
        PTL+RW + D + GRLEDH+AH+   I  L+A
Subjt:  PTLIRWEENDKISGRLEDHEAHVERKIDALIA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGGTGAAGCTACTGGACGCTACAGTCTCCAATTTCAGTACTGTTTTCGACAAATTCCGATCAGATTTGCCAAACCACAAAGCTAATTTCATCCTTTTCTTGGCCGA
CAACGATCCTTCCACCTCTCTCAGCTGGTGTCCCGACTGTGTGAGAGCTGAACCAGTCATCTTTAAGAAACTCGAATCAGCATCAGATGATATCGCACTTTTGAGAGCGT
ATGTTGGAGATCGACCAACATGGAGGAATGCTCTGCATCCATGGAGGGTGGATTCTAGGTTCAAGCTTACCGGAGTTCCAACGCTGATCCGATGGGAGGAGAATGATAAA
ATCAGCGGTCGGCTTGAAGACCATGAAGCTCATGTGGAGCGCAAAATTGATGCCCTTATTGCTGCTCAATAA
mRNA sequenceShow/hide mRNA sequence
CGTTTAAAAAGGGCATTTTGTTGATGAAGTTCAGAGGCTGCTCTTTCAGTTTGGTCCTTCGAAATCTGAGAAGAAGAAGCAATGCCGGTGAAGCTACTGGACGCTACAGT
CTCCAATTTCAGTACTGTTTTCGACAAATTCCGATCAGATTTGCCAAACCACAAAGCTAATTTCATCCTTTTCTTGGCCGACAACGATCCTTCCACCTCTCTCAGCTGGT
GTCCCGACTGTGTGAGAGCTGAACCAGTCATCTTTAAGAAACTCGAATCAGCATCAGATGATATCGCACTTTTGAGAGCGTATGTTGGAGATCGACCAACATGGAGGAAT
GCTCTGCATCCATGGAGGGTGGATTCTAGGTTCAAGCTTACCGGAGTTCCAACGCTGATCCGATGGGAGGAGAATGATAAAATCAGCGGTCGGCTTGAAGACCATGAAGC
TCATGTGGAGCGCAAAATTGATGCCCTTATTGCTGCTCAATAAATGTCTGCCAAAGTACCTTTCCAAACTTGATATCTATTATCTTTTTCCCTTCTTGAGGAACTTTGTT
TGATGTTGGAATTAGCTTGGTTATCGATAGCACATTGATATACTAGAAATAAAATCTATCATATTAGTTGGTCTA
Protein sequenceShow/hide protein sequence
MPVKLLDATVSNFSTVFDKFRSDLPNHKANFILFLADNDPSTSLSWCPDCVRAEPVIFKKLESASDDIALLRAYVGDRPTWRNALHPWRVDSRFKLTGVPTLIRWEENDK
ISGRLEDHEAHVERKIDALIAAQ