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Sed0019850 (gene) of Chayote v1 genome

Gene IDSed0019850
OrganismSechium edule (Chayote v1)
Descriptionmembrane magnesium transporter
Genome locationLG02:44175842..44184133
RNA-Seq ExpressionSed0019850
SyntenySed0019850
Gene Ontology termsGO:0098655 - cation transmembrane transport (biological process)
GO:0005769 - early endosome (cellular component)
GO:0005794 - Golgi apparatus (cellular component)
GO:0005886 - plasma membrane (cellular component)
GO:0072546 - ER membrane protein complex (cellular component)
GO:0022890 - inorganic cation transmembrane transporter activity (molecular function)
InterPro domainsIPR018937 - Membrane magnesium transporter


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004137837.1 membrane magnesium transporter [Cucumis sativus]5.8e-4183.81Show/hide
Query:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ
        MGV FV+GV GVLILAHA YSTIQYR+LLKIMQEEFS PPFHV +ELILG VLSMWAALTVPGKF SINPE+EENRIV LP N DFMVFNHRG+LFP+Q 
Subjt:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ

Query:  DLKLK
        DLKLK
Subjt:  DLKLK

XP_022144662.1 membrane magnesium transporter [Momordica charantia]3.4e-4185.71Show/hide
Query:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ
        MGVSFV+GV GVLILAHA YSTIQYRNLLKIMQEEFSAPP +V IELI+G VLSMWAALTVPGKFLSINP+SEENRIV LP N DFMVFNHRG+LFP Q 
Subjt:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ

Query:  DLKLK
        DLKLK
Subjt:  DLKLK

XP_022955639.1 membrane magnesium transporter [Cucurbita moschata]9.0e-4286.67Show/hide
Query:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ
        MGV FV+GV GVLILAHA YSTIQYR+LLKIMQEEFS PPF+V IEL+LG VLSMWAALTVPGKFLSINPESEENRIV LP NLDFMVFNHRGKLF QQ 
Subjt:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ

Query:  DLKLK
        DLKLK
Subjt:  DLKLK

XP_023005713.1 membrane magnesium transporter [Cucurbita maxima]2.0e-4185.71Show/hide
Query:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ
        MGV FV+GV GVLILAHA YSTIQYR+LLKIMQEEF+ PPF+V IEL+LG VLSMWAALTVPGKFLSINPESEENRIV LP NLDFMVFNHRGKLF QQ 
Subjt:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ

Query:  DLKLK
        DLKLK
Subjt:  DLKLK

XP_038903501.1 membrane magnesium transporter [Benincasa hispida]5.8e-4183.81Show/hide
Query:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ
        MGV FV+GV GVLILAHA YSTIQYR+LLKIMQEEFS PPFHV IELILG VLSMWAALTVPGKF SINPE+EENRIV LP N DFM+FNHRG+LFP+Q 
Subjt:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ

Query:  DLKLK
        DLKLK
Subjt:  DLKLK

TrEMBL top hitse value%identityAlignment
A0A0A0LFT4 Uncharacterized protein2.8e-4183.81Show/hide
Query:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ
        MGV FV+GV GVLILAHA YSTIQYR+LLKIMQEEFS PPFHV +ELILG VLSMWAALTVPGKF SINPE+EENRIV LP N DFMVFNHRG+LFP+Q 
Subjt:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ

Query:  DLKLK
        DLKLK
Subjt:  DLKLK

A0A5D3DND5 Membrane magnesium transporter4.8e-4183.81Show/hide
Query:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ
        MGV FV+GV GVLILAHA YSTIQYR+LLKIMQEEFS PPFHV IELILG VLSMWAALTVPGKF SINPE+EENRIV LP N DFMVFNHRG+LFP++ 
Subjt:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ

Query:  DLKLK
        DLKLK
Subjt:  DLKLK

A0A6J1CUB1 membrane magnesium transporter1.7e-4185.71Show/hide
Query:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ
        MGVSFV+GV GVLILAHA YSTIQYRNLLKIMQEEFSAPP +V IELI+G VLSMWAALTVPGKFLSINP+SEENRIV LP N DFMVFNHRG+LFP Q 
Subjt:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ

Query:  DLKLK
        DLKLK
Subjt:  DLKLK

A0A6J1GWV2 membrane magnesium transporter4.4e-4286.67Show/hide
Query:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ
        MGV FV+GV GVLILAHA YSTIQYR+LLKIMQEEFS PPF+V IEL+LG VLSMWAALTVPGKFLSINPESEENRIV LP NLDFMVFNHRGKLF QQ 
Subjt:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ

Query:  DLKLK
        DLKLK
Subjt:  DLKLK

A0A6J1L020 membrane magnesium transporter9.7e-4285.71Show/hide
Query:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ
        MGV FV+GV GVLILAHA YSTIQYR+LLKIMQEEF+ PPF+V IEL+LG VLSMWAALTVPGKFLSINPESEENRIV LP NLDFMVFNHRGKLF QQ 
Subjt:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ

Query:  DLKLK
        DLKLK
Subjt:  DLKLK

SwissProt top hitse value%identityAlignment
Q2HIM5 Membrane magnesium transporter8.2e-3870.87Show/hide
Query:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ
        M + F++GV GVLIL+HA YSTIQYR LLKIM+EEFS PP +V++ELI+G  L MWAALT PGKFLSI+P+S+ENR VFLPDN DFM+FNHRG+LFP Q 
Subjt:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ

Query:  DLK
        D+K
Subjt:  DLK

Q6TLE4 ER membrane protein complex subunit 54.0e-0830.84Show/hide
Query:  MGVSFVIGVIGV--LILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVF--LPDNLDFMVFNHRGKLF
        M  SF  GV+G+    LAHA +S  Q+R+ +++ ++E    P  +V++ +L FV++ +  + + G+F  ++  SE     F  L ++  F +FNHRG++ 
Subjt:  MGVSFVIGVIGV--LILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVF--LPDNLDFMVFNHRGKLF

Query:  ---PQQQ
           P+Q+
Subjt:  ---PQQQ

Q86J02 ER membrane protein complex subunit 5 homolog1.3e-0630.93Show/hide
Query:  GVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALT----VPGKFLSINPESEENRIVFLPDNLDFMVFNHRGK
        G++ +  VIG+ I  H  YS +Q+R  L++  + F   PF +V+E I+   L  W  +     +P K  +   +   +   + P   +F VFNHRGK
Subjt:  GVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALT----VPGKFLSINPESEENRIVFLPDNLDFMVFNHRGK

Arabidopsis top hitse value%identityAlignment
AT5G03345.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium transporter (InterPro:IPR018937); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).5.8e-3970.87Show/hide
Query:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ
        M + F++GV GVLIL+HA YSTIQYR LLKIM+EEFS PP +V++ELI+G  L MWAALT PGKFLSI+P+S+ENR VFLPDN DFM+FNHRG+LFP Q 
Subjt:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ

Query:  DLK
        D+K
Subjt:  DLK

AT5G03345.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Magnesium transporter (InterPro:IPR018937); Has 155 Blast hits to 155 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa - 105; Fungi - 0; Plants - 44; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).5.4e-3768.93Show/hide
Query:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ
        M + F++GV GVLIL+HA YSTIQ   LLKIM+EEFS PP +V++ELI+G  L MWAALT PGKFLSI+P+S+ENR VFLPDN DFM+FNHRG+LFP Q 
Subjt:  MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQ

Query:  DLK
        D+K
Subjt:  DLK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGTGAGCTTCGTGATCGGCGTCATCGGAGTTCTAATTCTGGCTCACGCGACTTATTCAACCATCCAATATAGGAACTTGTTGAAGATCATGCAGGAAGAGTTTTC
CGCACCTCCATTTCATGTGGTAATCGAATTGATTCTAGGGTTTGTATTGTCCATGTGGGCTGCGCTCACCGTGCCTGGGAAGTTCCTCTCCATTAATCCTGAATCCGAGG
AGAATCGGATAGTTTTTCTTCCTGACAATTTAGATTTCATGGTCTTCAACCACCGAGGCAAATTATTTCCCCAGCAACAGGACTTGAAGCTGAAACAATGA
mRNA sequenceShow/hide mRNA sequence
CAACGAAAGAATTATTTAGAACTCGTGAAAGTGAGGAAGAAGAAGATCTCTGTGGTTGAAATTGTAGATTCCGGCGCCGGTGATTGAGATCCGTCAGTCGAGATGGGAGT
GAGCTTCGTGATCGGCGTCATCGGAGTTCTAATTCTGGCTCACGCGACTTATTCAACCATCCAATATAGGAACTTGTTGAAGATCATGCAGGAAGAGTTTTCCGCACCTC
CATTTCATGTGGTAATCGAATTGATTCTAGGGTTTGTATTGTCCATGTGGGCTGCGCTCACCGTGCCTGGGAAGTTCCTCTCCATTAATCCTGAATCCGAGGAGAATCGG
ATAGTTTTTCTTCCTGACAATTTAGATTTCATGGTCTTCAACCACCGAGGCAAATTATTTCCCCAGCAACAGGACTTGAAGCTGAAACAATGAGATCTCTGTCATGATTA
AAGTAGGTCCTGGGGAATTCTAGCTGAAAGCATATATGGACGTTAAAGAGCTTAATGTTGGAGATATTGCTCCATTCCATCAATATGATGTTACTTCTCTTGTTTAACAT
TTTGGATATTGTAAGGTTTTCTTTTTCCTGTTTATTTTCGCAGTCTCTTCCTCAAAGCAAATTCTTGCCTTCGTTGTTGAATTAGGCCACTTTTGGATCGATATGAAAGA
TAAATATGCATTTCTGCAGTTTGGTAAAATGAGATTAGTTGGTGTTAATCGTTTTTTCTCTTTATGATCTGTTGCTATGAATTAGGGTTCTTTTGGATGGAAAGAAGTGA
TATGCTTCATGCTCTACAATGAATTTTGTATTCTGGTGCAAACTTG
Protein sequenceShow/hide protein sequence
MGVSFVIGVIGVLILAHATYSTIQYRNLLKIMQEEFSAPPFHVVIELILGFVLSMWAALTVPGKFLSINPESEENRIVFLPDNLDFMVFNHRGKLFPQQQDLKLKQ