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Sed0019865 (gene) of Chayote v1 genome

Gene IDSed0019865
OrganismSechium edule (Chayote v1)
Descriptionpolcalcin Bra n 2-like
Genome locationLG05:38508101..38508352
RNA-Seq ExpressionSed0019865
SyntenySed0019865
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149790.1 probable calcium-binding protein CML28 [Cucumis sativus]1.5e-2882.93Show/hide
Query:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA
        MA++GV+S + ERIFK FDANGDGKISA+ELGDAL  FGVSSEDAK MMDAIDKDGDG+ISF+EFF+FAKDNRALMKDFAKA
Subjt:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA

XP_016902062.1 PREDICTED: polcalcin Bra n 2-like [Cucumis melo]1.1e-2984.15Show/hide
Query:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA
        MA++GV+S +CERIFK FDANGDGKISA+ELGDAL GFGVSSEDAK MMDAIDKDGDG+ISF+EF +FAKDNRALMKDFAKA
Subjt:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA

XP_022143412.1 polcalcin Bra n 2-like [Momordica charantia]8.1e-3087.34Show/hide
Query:  NGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA
        +GVS+EECER+FK FDANGDGKISA+ELGDALKGFGVS+EDAKTMMDAIDKDGDGFIS +EF +FAKDNRALMKDFAKA
Subjt:  NGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA

XP_022948513.1 probable calcium-binding protein CML28 [Cucurbita moschata]5.6e-3187.8Show/hide
Query:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA
        MA+NGV S ECERIFK FDANGDG+ISA+ELGDAL G GVSSEDAK MMDAIDKDGDGFISF+EFFEFAKDNRALMKDFAKA
Subjt:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA

XP_038874793.1 probable calcium-binding protein CML28 [Benincasa hispida]8.1e-3086.59Show/hide
Query:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA
        MAE+GVS+ +CERIFK FDANGDGKISA+ELGDAL GFGVS+EDAK MMDAIDKDGDG ISFEEF EFAKDNRALMKDFAKA
Subjt:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA

TrEMBL top hitse value%identityAlignment
A0A0A0L775 Putative calcium-binding protein CML287.4e-2982.93Show/hide
Query:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA
        MA++GV+S + ERIFK FDANGDGKISA+ELGDAL  FGVSSEDAK MMDAIDKDGDG+ISF+EFF+FAKDNRALMKDFAKA
Subjt:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA

A0A1S4E1G1 polcalcin Bra n 2-like5.1e-3084.15Show/hide
Query:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA
        MA++GV+S +CERIFK FDANGDGKISA+ELGDAL GFGVSSEDAK MMDAIDKDGDG+ISF+EF +FAKDNRALMKDFAKA
Subjt:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA

A0A6J1CQR0 polcalcin Bra n 2-like3.9e-3087.34Show/hide
Query:  NGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA
        +GVS+EECER+FK FDANGDGKISA+ELGDALKGFGVS+EDAKTMMDAIDKDGDGFIS +EF +FAKDNRALMKDFAKA
Subjt:  NGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA

A0A6J1G9I0 probable calcium-binding protein CML282.7e-3187.8Show/hide
Query:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA
        MA+NGV S ECERIFK FDANGDG+ISA+ELGDAL G GVSSEDAK MMDAIDKDGDGFISF+EFFEFAKDNRALMKDFAKA
Subjt:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA

A0A6J1KB11 probable calcium-binding protein CML282.7e-3187.8Show/hide
Query:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA
        MA+NGV S ECERIFK FDANGDG+ISA+ELGDAL G GVSSEDAK MMDAIDKDGDGFISF+EFFEFAKDNRALMKDFAKA
Subjt:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKA

SwissProt top hitse value%identityAlignment
O81092 Polcalcin Ole e 37.4e-1862.2Show/hide
Query:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFG-VSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAK
        MA++     E ERIFK FDANGDGKIS+SELG+ LK  G V+ E+ + MM  ID DGDGFISFEEF  FA+ NR L+KD AK
Subjt:  MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFG-VSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAK

O81701 Polcalcin Aln g 41.9e-1869.86Show/hide
Query:  ECERIFKGFDANGDGKISASELGDALKGFG-VSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAK
        E ERIFK FDANGDGKISASELGDALK  G V+ ++ K MM  ID DGDGFISF+EF  FA+ NR L+KD AK
Subjt:  ECERIFKGFDANGDGKISASELGDALKGFG-VSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAK

P69198 Polcalcin Bra n 21.1e-1868.49Show/hide
Query:  ECERIFKGFDANGDGKISASELGDALKGFG-VSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAK
        E +RIFK FDANGDGKISASELGDALK  G V+ +D K MM  ID DGDG+IS++EF +FA  NR LMKD AK
Subjt:  ECERIFKGFDANGDGKISASELGDALKGFG-VSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAK

P69199 Polcalcin Bra r 21.1e-1868.49Show/hide
Query:  ECERIFKGFDANGDGKISASELGDALKGFG-VSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAK
        E +RIFK FDANGDGKISASELGDALK  G V+ +D K MM  ID DGDG+IS++EF +FA  NR LMKD AK
Subjt:  ECERIFKGFDANGDGKISASELGDALKGFG-VSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAK

Q9SRP7 Probable calcium-binding protein CML286.7e-1968.49Show/hide
Query:  ECERIFKGFDANGDGKISASELGDALKGFG-VSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAK
        E +RIFK FDANGDGKISA+ELGDALK  G V+ ED K MM  ID DGDG+IS++EF +FA  NR LMKD AK
Subjt:  ECERIFKGFDANGDGKISASELGDALKGFG-VSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAK

Arabidopsis top hitse value%identityAlignment
AT1G24620.1 EF hand calcium-binding protein family6.4e-0950Show/hide
Query:  ECERIFKGFDANGDGKISASELGDALKGFG--VSSEDAKTMMDAIDKDGDGFISFEEFFE
        E E +FK FD NGDGKIS+ ELG  +   G  V  E+ +  +  ID+ GDG+I+FEEF E
Subjt:  ECERIFKGFDANGDGKISASELGDALKGFG--VSSEDAKTMMDAIDKDGDGFISFEEFFE

AT3G03430.1 Calcium-binding EF-hand family protein4.7e-2068.49Show/hide
Query:  ECERIFKGFDANGDGKISASELGDALKGFG-VSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAK
        E +RIFK FDANGDGKISA+ELGDALK  G V+ ED K MM  ID DGDG+IS++EF +FA  NR LMKD AK
Subjt:  ECERIFKGFDANGDGKISASELGDALKGFG-VSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAK

AT3G07490.1 ARF-GAP domain 119.3e-0846.55Show/hide
Query:  ECERIFKGFDANGDGKISASELGDALKGFG--VSSEDAKTMMDAIDKDGDGFISFEEF
        E  RIF+ FD NGDGKI+  EL D+L+  G  +  +D   M++ ID +GDG++  EEF
Subjt:  ECERIFKGFDANGDGKISASELGDALKGFG--VSSEDAKTMMDAIDKDGDGFISFEEF

AT3G51920.1 calmodulin 94.2e-0845.9Show/hide
Query:  SSEECERIFKGFDANGDGKISASELGDALKGFG--VSSEDAKTMMDAIDKDGDGFISFEEF
        +S+E   +F+ FD +GDG IS  ELG+ +K  G  +++E+A+ M+   D DGDGF+SF EF
Subjt:  SSEECERIFKGFDANGDGKISASELGDALKGFG--VSSEDAKTMMDAIDKDGDGFISFEEF

AT5G17480.1 pollen calcium-binding protein 12.9e-1764.38Show/hide
Query:  ECERIFKGFDANGDGKISASELGDALKGFG-VSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAK
        E +RIFK FDANGDGKISA+EL +ALK  G V+++D K MM  ID DGDG IS++EF +FA  NR LMKD AK
Subjt:  ECERIFKGFDANGDGKISASELGDALKGFG-VSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGAAAATGGCGTAAGCTCGGAAGAGTGTGAGAGGATTTTCAAGGGTTTCGATGCAAACGGCGATGGAAAGATCTCAGCATCGGAGCTCGGTGATGCATTGAAAGG
ATTCGGAGTGAGCTCCGAGGATGCGAAGACGATGATGGACGCCATTGATAAAGATGGCGATGGCTTCATTTCGTTCGAAGAGTTCTTCGAATTTGCCAAGGATAATCGCG
CCTTGATGAAGGATTTTGCCAAGGCGATTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCAGAAAATGGCGTAAGCTCGGAAGAGTGTGAGAGGATTTTCAAGGGTTTCGATGCAAACGGCGATGGAAAGATCTCAGCATCGGAGCTCGGTGATGCATTGAAAGG
ATTCGGAGTGAGCTCCGAGGATGCGAAGACGATGATGGACGCCATTGATAAAGATGGCGATGGCTTCATTTCGTTCGAAGAGTTCTTCGAATTTGCCAAGGATAATCGCG
CCTTGATGAAGGATTTTGCCAAGGCGATTTAG
Protein sequenceShow/hide protein sequence
MAENGVSSEECERIFKGFDANGDGKISASELGDALKGFGVSSEDAKTMMDAIDKDGDGFISFEEFFEFAKDNRALMKDFAKAI