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Sed0019887 (gene) of Chayote v1 genome

Gene IDSed0019887
OrganismSechium edule (Chayote v1)
DescriptionAuxin-responsive protein
Genome locationLG14:2311258..2311775
RNA-Seq ExpressionSed0019887
SyntenySed0019887
Gene Ontology termsGO:0009733 - response to auxin (biological process)
InterPro domainsIPR003676 - Small auxin-up RNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6603262.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]2.1e-4176.72Show/hide
Query:  MPERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHHG---
        MPE+KKMKVKKGWL VEVGLQEED R ERFVVPISYL+HP FK LLDKAQE+YGYHANGPLRLPCSVDDFLQ+RW+IE+E DQ NN KQ  NHQHH    
Subjt:  MPERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHHG---

Query:  ---YYHLPLALSFHSC
           +Y++PLALSF SC
Subjt:  ---YYHLPLALSFHSC

KAG6603263.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]3.2e-4276.11Show/hide
Query:  MPERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHHGY--
        MPE+KKMKVKKGWL VEVGLQEED R ERFVVPISYL+HP FK LLDKAQE+YGYHANGPLRLPCSVDDFLQLRW+IE+E DQ N+ + + NH+H  Y  
Subjt:  MPERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHHGY--

Query:  -YHLPLALSFHSC
         Y++PLALSF SC
Subjt:  -YHLPLALSFHSC

KGN54862.1 hypothetical protein Csa_012431 [Cucumis sativus]2.9e-4378.76Show/hide
Query:  MPERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQ---HHG
        MPE+KKMKVKKGWL VEVGLQEEDER ERFVVPISYLYHP FK LLDKAQEIYGYHANGPLRLPCSVDDFLQLRW+IE+E DQ  + +  + H+   HH 
Subjt:  MPERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQ---HHG

Query:  YYHLPLALSFHSC
        +YHLPLALSF SC
Subjt:  YYHLPLALSFHSC

XP_002272614.1 PREDICTED: auxin-responsive protein SAUR32-like [Vitis vinifera]8.5e-3570Show/hide
Query:  MPERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHHGYYH
        M E KKMKVKKGWL VEVGL+EED   +RFV+PISYLYHP FK+LL+KAQE+YG+H  GPLRLPCSVDDFL LRWRIERE     N    N+H HH  +H
Subjt:  MPERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHHGYYH

Query:  LPLALSFHSC
        L  ALSFHSC
Subjt:  LPLALSFHSC

XP_022154927.1 auxin-responsive protein SAUR32-like [Momordica charantia]4.2e-4279.46Show/hide
Query:  MPERKKMKVKKGWLIVEVGLQ-EEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNH-QHHGY
        M ERKKMKVKKGWL VEVGLQ EED R ERFVVPISYLYHP FKKLLDKAQE+YGYHANGPLRLPCSVDDFLQLRWRI++E DQ +    ++ H QHH +
Subjt:  MPERKKMKVKKGWLIVEVGLQ-EEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNH-QHHGY

Query:  YHLPLALSFHSC
        YHLPLALSF SC
Subjt:  YHLPLALSFHSC

TrEMBL top hitse value%identityAlignment
A0A0A0L2M8 SAUR family protein1.4e-4378.76Show/hide
Query:  MPERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQ---HHG
        MPE+KKMKVKKGWL VEVGLQEEDER ERFVVPISYLYHP FK LLDKAQEIYGYHANGPLRLPCSVDDFLQLRW+IE+E DQ  + +  + H+   HH 
Subjt:  MPERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQ---HHG

Query:  YYHLPLALSFHSC
        +YHLPLALSF SC
Subjt:  YYHLPLALSFHSC

A0A438KIZ8 Auxin-responsive protein SAUR324.1e-3570Show/hide
Query:  MPERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHHGYYH
        M E KKMKVKKGWL VEVGL+EED   +RFV+PISYLYHP FK+LL+KAQE+YG+H  GPLRLPCSVDDFL LRWRIERE     N    N+H HH  +H
Subjt:  MPERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHHGYYH

Query:  LPLALSFHSC
        L  ALSFHSC
Subjt:  LPLALSFHSC

A0A6J1DN07 auxin-responsive protein SAUR32-like2.0e-4279.46Show/hide
Query:  MPERKKMKVKKGWLIVEVGLQ-EEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNH-QHHGY
        M ERKKMKVKKGWL VEVGLQ EED R ERFVVPISYLYHP FKKLLDKAQE+YGYHANGPLRLPCSVDDFLQLRWRI++E DQ +    ++ H QHH +
Subjt:  MPERKKMKVKKGWLIVEVGLQ-EEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNH-QHHGY

Query:  YHLPLALSFHSC
        YHLPLALSF SC
Subjt:  YHLPLALSFHSC

A0A7J0EXZ6 Uncharacterized protein4.5e-3464.55Show/hide
Query:  MPERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHHGYYH
        M E KKMKVKKGWL V VG ++ED   +RFV+PIS+LYHP FKKLL+KA E+YGYH  GPLRLPCSVDDFL LRW+IE+E     N    N+H HH +YH
Subjt:  MPERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHHGYYH

Query:  LPLALSFHSC
        L  +LSF+SC
Subjt:  LPLALSFHSC

A0A7N2MR82 Uncharacterized protein2.7e-3465.18Show/hide
Query:  MPERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHHGYY-
        M E KKMKVKKGWL V+VGL++ED   +RFV+PIS+LYHP FK+LL+KA E+YGYH  GPLRLPCSVDDFL LRWRIE+E +        N+H HH ++ 
Subjt:  MPERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHHGYY-

Query:  -HLPLALSFHSC
         HLP ALSFHSC
Subjt:  -HLPLALSFHSC

SwissProt top hitse value%identityAlignment
P33079 Auxin-induced protein 10A51.6e-0740Show/hide
Query:  KKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGY-HANGPLRLPCSVDDFLQL
        K++ V KG+  V VG     ++  RF +P+SYL  P F++LL +A+E +GY H  G L +PC  ++FL +
Subjt:  KKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGY-HANGPLRLPCSVDDFLQL

P33080 Auxin-induced protein X10A8.3e-0944.12Show/hide
Query:  KKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGY-HANGPLRLPCSVDDFL
        K ++V KG+L+V VG     ++  RF++P+SYL  P F+ LL++A+E +GY H  G L +PC  D+FL
Subjt:  KKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGY-HANGPLRLPCSVDDFL

P33083 Auxin-induced protein 6B4.9e-0949.25Show/hide
Query:  KKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGY-HANGPLRLPCSVDDF
        K + V+KG+L V VG     E+  RFV+P+SYL  P F+ LL +A+E +GY H NG L +PCS D F
Subjt:  KKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGY-HANGPLRLPCSVDDF

Q41220 Auxin-responsive protein SAUR151.2e-0738.16Show/hide
Query:  RKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGY-HANGPLRLPCSVDDFLQLRWRIE
        R+     +G++ V VG  E D++ +R+VVP+SYL  P F++LL K++E +GY H  G L +PC    F  +  +I+
Subjt:  RKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGY-HANGPLRLPCSVDDFLQLRWRIE

Q9ZUZ3 Auxin-responsive protein SAUR321.5e-1036.63Show/hide
Query:  KKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHHG----YYH
        K   V KG L ++VG Q E++  +RF+VP+ Y  HP F +LL +A++ YG+   G + +PC V++F  ++  I+ E    N     N+H  HG    Y+H
Subjt:  KKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHHG----YYH

Query:  L
        L
Subjt:  L

Arabidopsis top hitse value%identityAlignment
AT2G46690.1 SAUR-like auxin-responsive protein family1.1e-1136.63Show/hide
Query:  KKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHHG----YYH
        K   V KG L ++VG Q E++  +RF+VP+ Y  HP F +LL +A++ YG+   G + +PC V++F  ++  I+ E    N     N+H  HG    Y+H
Subjt:  KKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHHG----YYH

Query:  L
        L
Subjt:  L

AT3G61900.1 SAUR-like auxin-responsive protein family1.1e-1140Show/hide
Query:  VKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIERE---DDQLNNTKQKNNHQHHGYYH
        V KG L ++VG +EE++  +RFVVP+ Y  HP F +LL +A+E YG+   G + +PC V+ F  ++  I RE   DD  + +KQ      HG  H
Subjt:  VKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIERE---DDQLNNTKQKNNHQHHGYYH

AT4G00880.1 SAUR-like auxin-responsive protein family2.6e-1339.36Show/hide
Query:  ERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHH
        E    KV KG L V+VG  EE    ERFV+P+ Y  HP F +LL +A+E +G+   G + +PC V++F  ++  I+RE+ +   T   ++H HH
Subjt:  ERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHH

AT4G22620.1 SAUR-like auxin-responsive protein family4.1e-1141.77Show/hide
Query:  ERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIERED
        E K   V +G L+V VG  E  E T R VVP+ Y  HP F +LL++A+ +YG+   G + +PC V DF +++ RI   D
Subjt:  ERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIERED

AT5G53590.1 SAUR-like auxin-responsive protein family5.7e-1337.78Show/hide
Query:  VKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNN--TKQKNNHQHH
        V KG + + VG ++++E   RFVVP+ +L HP F  LL +A++ YG+  +GP+ +PC VD+F  ++  I+ E  + ++      NNH HH
Subjt:  VKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNN--TKQKNNHQHH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTGAGAGAAAGAAGATGAAGGTGAAGAAAGGATGGCTAATTGTGGAAGTAGGATTGCAAGAGGAAGATGAAAGAACAGAGAGATTTGTGGTTCCAATATCCTATTT
ATATCACCCTTATTTCAAGAAGCTCTTGGACAAGGCTCAAGAAATCTATGGCTACCATGCCAACGGCCCGCTTCGGCTTCCGTGCTCGGTCGACGACTTTCTCCAGCTTC
GGTGGCGAATCGAGAGAGAAGATGACCAACTCAACAACACCAAACAGAAAAATAATCATCAGCATCATGGCTACTATCACCTTCCACTTGCTTTGTCTTTCCATTCTTGT
TGA
mRNA sequenceShow/hide mRNA sequence
AAAGAAAATAAAAAAAAATAATAAAAATAAAATAAATGCCTGAGAGAAAGAAGATGAAGGTGAAGAAAGGATGGCTAATTGTGGAAGTAGGATTGCAAGAGGAAGATGAA
AGAACAGAGAGATTTGTGGTTCCAATATCCTATTTATATCACCCTTATTTCAAGAAGCTCTTGGACAAGGCTCAAGAAATCTATGGCTACCATGCCAACGGCCCGCTTCG
GCTTCCGTGCTCGGTCGACGACTTTCTCCAGCTTCGGTGGCGAATCGAGAGAGAAGATGACCAACTCAACAACACCAAACAGAAAAATAATCATCAGCATCATGGCTACT
ATCACCTTCCACTTGCTTTGTCTTTCCATTCTTGTTGAGAGAATTTTCTTTAGTTTTGAAGTTTTTATTATGTGAAACCCTAATTCAAAATCATGTTTGGAGTTTCTTCT
TGCTGTATATGTTTTAAAATTGGCAAAAGGATGAATTTGTCTTTTGACTTTAAGGTTAATGAATTGGAGGTTTAAAAT
Protein sequenceShow/hide protein sequence
MPERKKMKVKKGWLIVEVGLQEEDERTERFVVPISYLYHPYFKKLLDKAQEIYGYHANGPLRLPCSVDDFLQLRWRIEREDDQLNNTKQKNNHQHHGYYHLPLALSFHSC