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Sed0019897 (gene) of Chayote v1 genome

Gene IDSed0019897
OrganismSechium edule (Chayote v1)
DescriptionProtein kinase domain-containing protein
Genome locationLG11:24623941..24624582
RNA-Seq ExpressionSed0019897
SyntenySed0019897
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0063096.1 putative transmembrane protein [Cucumis melo var. makuwa]1.6e-4280.8Show/hide
Query:  MSLPIEQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVS--AAASLPA
        MS PIEQQSPPG  +QQ Y GH GSGSVGPVIGVLVVIIVFAVVAV VG+LCSGRSIMGYGHFDLESWAETKCSSCI GRI+  PPR++ S  AA+SLPA
Subjt:  MSLPIEQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVS--AAASLPA

Query:  GTMAVQTQKETKQEEPALQNPPAIA
        GTMAV TQ+ETKQEEPA QNP A A
Subjt:  GTMAVQTQKETKQEEPALQNPPAIA

KAG6598392.1 hypothetical protein SDJN03_08170, partial [Cucurbita argyrosperma subsp. sororia]2.0e-4582.93Show/hide
Query:  MSLPIEQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVSAAASLPAGT
        MSLPIEQQSPP   M  PY GH  SGSVGPVIGVLVVIIVFAVVAV VG+LCSG SIMGYGHFDLESWAETKCSSCI GRISS+PPR+NVS AASLP GT
Subjt:  MSLPIEQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVSAAASLPAGT

Query:  MAVQTQKETKQEEPALQNPPAIA
        MAV+TQ+ETKQEEPA QNP A A
Subjt:  MAVQTQKETKQEEPALQNPPAIA

XP_022144319.1 uncharacterized protein LOC111014030 [Momordica charantia]3.8e-4481.3Show/hide
Query:  MSLPIEQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVSAAASLPA--
        MSLPIEQQSPP P MQQPY GHL +GSVGPVIGVLVVIIVFAVVAV VG+LCSG++IMGYGHFDLESWAETKCSSCI GRIS  PPR NVSAA +  A  
Subjt:  MSLPIEQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVSAAASLPA--

Query:  GTMAVQTQKETKQEEPALQNPPA
         TMAVQTQ+ETKQEEPA QNP A
Subjt:  GTMAVQTQKETKQEEPALQNPPA

XP_031737057.1 uncharacterized protein LOC116402140 [Cucumis sativus]4.2e-4380.95Show/hide
Query:  MSLPIEQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVS---AAASLP
        MSLPIEQQSPPG  MQQ Y GH GSGSVGPVIGVL+VIIVFAVVAV VG+LCSGRSIMGYGHFDLESWAETKCSSCI GRI+  PPR++ S   AA+SLP
Subjt:  MSLPIEQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVS---AAASLP

Query:  AGTMAVQTQKETKQEEPALQNPPAIA
        AGTMAV TQ+ETKQEEPA QNP A A
Subjt:  AGTMAVQTQKETKQEEPALQNPPAIA

XP_038885752.1 uncharacterized protein LOC120076044 [Benincasa hispida]5.5e-4380.95Show/hide
Query:  MSLPIEQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRIN-VSAAASLPAG
        MSLPIEQQSPP   MQQ Y GH GSGSVGPVIGVLVVIIVFAVVAV VG+LCSGRSIMGYGHFDLESWAETKCSSCI GRIS  PPR++  +AAASLPAG
Subjt:  MSLPIEQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRIN-VSAAASLPAG

Query:  TMAVQTQKETK--QEEPALQNPPAIA
        TMA + Q+ETK  QEEPA QNPPA A
Subjt:  TMAVQTQKETK--QEEPALQNPPAIA

TrEMBL top hitse value%identityAlignment
A0A0A0LP67 Uncharacterized protein2.0e-4380.95Show/hide
Query:  MSLPIEQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVS---AAASLP
        MSLPIEQQSPPG  MQQ Y GH GSGSVGPVIGVL+VIIVFAVVAV VG+LCSGRSIMGYGHFDLESWAETKCSSCI GRI+  PPR++ S   AA+SLP
Subjt:  MSLPIEQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVS---AAASLP

Query:  AGTMAVQTQKETKQEEPALQNPPAIA
        AGTMAV TQ+ETKQEEPA QNP A A
Subjt:  AGTMAVQTQKETKQEEPALQNPPAIA

A0A5A7V9H6 Putative transmembrane protein7.8e-4380.8Show/hide
Query:  MSLPIEQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVS--AAASLPA
        MS PIEQQSPPG  +QQ Y GH GSGSVGPVIGVLVVIIVFAVVAV VG+LCSGRSIMGYGHFDLESWAETKCSSCI GRI+  PPR++ S  AA+SLPA
Subjt:  MSLPIEQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVS--AAASLPA

Query:  GTMAVQTQKETKQEEPALQNPPAIA
        GTMAV TQ+ETKQEEPA QNP A A
Subjt:  GTMAVQTQKETKQEEPALQNPPAIA

A0A6J1CRZ5 uncharacterized protein LOC1110140301.9e-4481.3Show/hide
Query:  MSLPIEQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVSAAASLPA--
        MSLPIEQQSPP P MQQPY GHL +GSVGPVIGVLVVIIVFAVVAV VG+LCSG++IMGYGHFDLESWAETKCSSCI GRIS  PPR NVSAA +  A  
Subjt:  MSLPIEQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVSAAASLPA--

Query:  GTMAVQTQKETKQEEPALQNPPA
         TMAVQTQ+ETKQEEPA QNP A
Subjt:  GTMAVQTQKETKQEEPALQNPPA

A0A6J1KK79 uncharacterized protein LOC1114960287.3e-4180.33Show/hide
Query:  MSLPIEQQSPPGPAMQQPYSGHLGS-GSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVS-AAASLPA
        MSLPI+QQSPP P MQQPY GH  S GSVGPVIGVLVVIIVFAVVAV VG+LCSGRSIMGYGHFDLE WAE KCSSCI GRISS  PR+NVS AAASLPA
Subjt:  MSLPIEQQSPPGPAMQQPYSGHLGS-GSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVS-AAASLPA

Query:  GTMAVQTQKETKQEEPALQNPP
         TM+VQTQ    Q+EPA QNPP
Subjt:  GTMAVQTQKETKQEEPALQNPP

A0A6P4ABB2 uncharacterized protein LOC1074209053.0e-2657.38Show/hide
Query:  MSLPI-EQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVSAAASLPAG
        M++P+ EQ  PP   +QQP+S H   GS+GP+I VLVVIIV  ++AV VG+LCSG+S+MGYG FDLESWAE KCSSCI G+I+S  PR N+S+  S+P  
Subjt:  MSLPI-EQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVSAAASLPAG

Query:  TMAVQTQKETKQEEPALQNPPA
        TM V+T +E  QEE +  NP A
Subjt:  TMAVQTQKETKQEEPALQNPPA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G26520.1 unknown protein2.0e-1442.53Show/hide
Query:  SLPIEQQSPPGPAMQQPYS--GHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPP
        S+P+  Q PP   + Q  S     G+ ++GP I V +V+ V  V+A  +G+LCSG++I+GYG +D+E WAE++C SCI G I    P
Subjt:  SLPIEQQSPPGPAMQQPYS--GHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCACTCCCAATTGAACAACAGTCTCCACCAGGGCCGGCAATGCAGCAACCTTACAGCGGGCATTTGGGCAGCGGCTCCGTTGGCCCGGTCATAGGAGTGCTCGTTGT
TATCATTGTGTTTGCTGTGGTCGCTGTGGCGGTCGGGCAGCTGTGCTCGGGTAGAAGTATAATGGGCTATGGGCATTTCGACTTGGAGAGCTGGGCAGAGACCAAATGCT
CGTCTTGTATCGTCGGAAGGATCAGCTCGTCGCCGCCGAGGATCAATGTCTCCGCCGCTGCATCTCTTCCTGCTGGGACAATGGCTGTCCAAACCCAGAAAGAAACTAAG
CAAGAGGAACCAGCTTTGCAAAATCCACCCGCCATTGCTTGA
mRNA sequenceShow/hide mRNA sequence
GAGATTGAACGTTTAACACTCCCAAAGATTCCATCTTTTCTGATTACATTACCAACCATCAATTTATACATCCTCTAAAAGCAACAACTTTTTCTCCATTGCTCATTCTT
TGCTCTATCTTTTTCCAGAGCTCTACAAATCTCCTCTCTGTTTTCTTCAGGTTCTTTTATTCCCCACAAATGTCACTCCCAATTGAACAACAGTCTCCACCAGGGCCGGC
AATGCAGCAACCTTACAGCGGGCATTTGGGCAGCGGCTCCGTTGGCCCGGTCATAGGAGTGCTCGTTGTTATCATTGTGTTTGCTGTGGTCGCTGTGGCGGTCGGGCAGC
TGTGCTCGGGTAGAAGTATAATGGGCTATGGGCATTTCGACTTGGAGAGCTGGGCAGAGACCAAATGCTCGTCTTGTATCGTCGGAAGGATCAGCTCGTCGCCGCCGAGG
ATCAATGTCTCCGCCGCTGCATCTCTTCCTGCTGGGACAATGGCTGTCCAAACCCAGAAAGAAACTAAGCAAGAGGAACCAGCTTTGCAAAATCCACCCGCCATTGCTTG
ATCTTTAATATATAACTTGATTAGGATTATGATAACCCCAGATTTCTGTGTTTCATTTTTTTTTTCTTTATTTGATTCTCGATAATGTATTG
Protein sequenceShow/hide protein sequence
MSLPIEQQSPPGPAMQQPYSGHLGSGSVGPVIGVLVVIIVFAVVAVAVGQLCSGRSIMGYGHFDLESWAETKCSSCIVGRISSSPPRINVSAAASLPAGTMAVQTQKETK
QEEPALQNPPAIA