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Sed0019909 (gene) of Chayote v1 genome

Gene IDSed0019909
OrganismSechium edule (Chayote v1)
DescriptionF-box/WD repeat-containing protein 4
Genome locationLG04:38249116..38249783
RNA-Seq ExpressionSed0019909
SyntenySed0019909
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6581581.1 hypothetical protein SDJN03_21583, partial [Cucurbita argyrosperma subsp. sororia]5.6e-2690.91Show/hide
Query:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
        MLQFFFTVAFSA PLTLYVPPLRS NLFVETMEEI RESRTYTNR+YPRARHVW R+LDCVLCSTR
Subjt:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
XP_011651782.1 uncharacterized protein LOC105434940 [Cucumis sativus]2.5e-2690.91Show/hide
Query:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
        MLQFFFTVAFSA PLTLYVPPLRS NLFVETMEEI RESRTYTNR+YPRARHVWLR+LDC+LCSTR
Subjt:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
XP_022152585.1 uncharacterized protein LOC111020277 [Momordica charantia]1.5e-2692.42Show/hide
Query:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
        MLQFFFT+AFSA PLTLYVPPLRSLNLFVETMEEI RESRTYTNR+YPRARHVWLR+LDCVLCSTR
Subjt:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
XP_022934952.1 uncharacterized protein LOC111441965 [Cucurbita moschata]5.6e-2690.91Show/hide
Query:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
        MLQFFFTVAFSA PLTLYVPPLRS NLFVETMEEI RESRTYTNR+YPRARHVW R+LDCVLCSTR
Subjt:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
XP_038905300.1 uncharacterized protein LOC120091370 [Benincasa hispida]3.3e-2689.39Show/hide
Query:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
        MLQFFFTVAFSA PLTLY+PPLRS NLFVETMEEI RESRTYTNR+YPRARHVWLR+LDC+LCSTR
Subjt:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
TrEMBL top hitse value%identityAlignment
A0A0A0LD25 Uncharacterized protein1.2e-2690.91Show/hide
Query:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
        MLQFFFTVAFSA PLTLYVPPLRS NLFVETMEEI RESRTYTNR+YPRARHVWLR+LDC+LCSTR
Subjt:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
A0A1S4E3E9 uncharacterized protein LOC1079918651.2e-2690.91Show/hide
Query:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
        MLQFFFTVAFSA PLTLYVPPLRS NLFVETMEEI RESRTYTNR+YPRARHVWLR+LDC+LCSTR
Subjt:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
A0A6J1DEC8 uncharacterized protein LOC1110202777.2e-2792.42Show/hide
Query:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
        MLQFFFT+AFSA PLTLYVPPLRSLNLFVETMEEI RESRTYTNR+YPRARHVWLR+LDCVLCSTR
Subjt:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
A0A6J1F484 uncharacterized protein LOC1114419652.7e-2690.91Show/hide
Query:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
        MLQFFFTVAFSA PLTLYVPPLRS NLFVETMEEI RESRTYTNR+YPRARHVW R+LDCVLCSTR
Subjt:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
A0A6J1J7E0 uncharacterized protein LOC1114819232.7e-2690.91Show/hide
Query:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
        MLQFFFTVAFSA PLTLYVPPLRS NLFVETMEEI RESRTYTNR+YPRARHVW R+LDCVLCSTR
Subjt:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G52105.1 unknown protein5.4e-1963.64Show/hide
Query:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR
        MLQ FFT+AFSAAPLTLY+PP+R L +FVETMEE+  E R Y+ R++PRAR  W R+LDC   S+R
Subjt:  MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTGCAGTTCTTCTTCACGGTGGCTTTCTCGGCGGCTCCGTTGACTCTCTACGTTCCGCCGCTCCGGAGCCTCAATCTCTTCGTGGAGACCATGGAGGAGATATTTCG
GGAGTCCAGAACATACACCAACCGGATGTATCCGCGTGCTCGCCATGTTTGGCTCAGGATTTTGGATTGCGTTCTTTGCAGCACCAGGTAG
mRNA sequenceShow/hide mRNA sequence
TAAATAATAGCATCCAGAAAAAAATTTCTAGTGGACCCCACCTACCCGTCTCTCACGGCCATTTGCATCGACACCATTCTGCAACCTTCCAGACCTCTCTCTCTCTCATC
GCTTTCTCTCTCCTCCAAATTCTCTCTAGAGGAGCCTAAATCCAGAGTCTCGAACCCTAGAACTACAGATTTCCTCAGAATTTGACCGGCGATTCGAAGATTCCGACGTC
TATGTGAGCGATGCTGCAGTTCTTCTTCACGGTGGCTTTCTCGGCGGCTCCGTTGACTCTCTACGTTCCGCCGCTCCGGAGCCTCAATCTCTTCGTGGAGACCATGGAGG
AGATATTTCGGGAGTCCAGAACATACACCAACCGGATGTATCCGCGTGCTCGCCATGTTTGGCTCAGGATTTTGGATTGCGTTCTTTGCAGCACCAGGTAGATTGACTGT
TTATTTTATCTCCTCTAGATTTCGAAGTTCAGGACGCTGATCTCTCTCTGTGTATATACCTTTCGATTCTCTTGTTTCTGTCTTTTGTTCCTTAAGATTCGGTGCTGATT
TAGTTGTTGCGGAATTTCTGTTGCAAATCGGTATATATAACTTGTATGAGGATGTGTTGTTTCAAGTTAATTTCAGAGAAATAAAGAACTTATGTTCTACATAAGATTTT
CTCCTATG
Protein sequenceShow/hide protein sequence
MLQFFFTVAFSAAPLTLYVPPLRSLNLFVETMEEIFRESRTYTNRMYPRARHVWLRILDCVLCSTR