; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0019910 (gene) of Chayote v1 genome

Gene IDSed0019910
OrganismSechium edule (Chayote v1)
Descriptionmyb-like transcription factor family protein
Genome locationLG07:13116193..13118195
RNA-Seq ExpressionSed0019910
SyntenySed0019910
Gene Ontology termsGO:0003677 - DNA binding (molecular function)
InterPro domainsIPR001005 - SANT/Myb domain
IPR006447 - Myb domain, plants
IPR009057 - Homeobox-like domain superfamily
IPR017884 - SANT domain
IPR017930 - Myb domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044592.1 myb-like protein J [Cucumis melo var. makuwa]1.0e-1535.59Show/hide
Query:  IENIVFENKWTEMSSNQTTNTKNLDFSPFRHVYQTNADIICEN-HLRAYRSDSSSIRTAVDRGCPAVSLSSTQFPP-PCNEVKAATHGTADSSTFKRKWS
        ++++ F N+ +   + QT++     +SP       N D   ++       SD   +R  V    P +S S+T     P     +       ++  +  WS
Subjt:  IENIVFENKWTEMSSNQTTNTKNLDFSPFRHVYQTNADIICEN-HLRAYRSDSSSIRTAVDRGCPAVSLSSTQFPP-PCNEVKAATHGTADSSTFKRKWS

Query:  IQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDITEFEPELLSMVRARL
        ++EH+L L GM++ GK +W  IAD VVITK++ QV+SHAQKYF  L    + K KRSSIHDIT  EPE L+ V A L
Subjt:  IQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDITEFEPELLSMVRARL

KGN53075.1 hypothetical protein Csa_014760 [Cucumis sativus]5.9e-1643.44Show/hide
Query:  PAVSLSSTQFPPPC----------NEVKAATHGTADSSTFKRKWSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEK
        P +SLS+T   P            N +K   + T         WSI+EHKL L GM++ G+G W  IA+ VV+TK++TQV+SHAQKYF R T    +K K
Subjt:  PAVSLSSTQFPPPC----------NEVKAATHGTADSSTFKRKWSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEK

Query:  RSSIHDITEFEPELLSMVRARL
        R+SIHDIT  EPE  ++  +R+
Subjt:  RSSIHDITEFEPELLSMVRARL

TYK16992.1 myb-like protein J [Cucumis melo var. makuwa]4.5e-1653.49Show/hide
Query:  SSTFKRKWSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDITEFEPELLSMVRARL
        ++  +  WS++EH+L L GM++ GK +W  IAD VVITK++ QV+SHAQKYF  L    + K KRSSIHDIT  EPE L+ V A L
Subjt:  SSTFKRKWSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDITEFEPELLSMVRARL

XP_011654326.2 myb-like protein J [Cucumis sativus]7.0e-1745.9Show/hide
Query:  PAVSLSSTQFPPPC----------NEVKAATHGTADSSTFKRKWSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEK
        P +SLS+T   P            N +K   + T         WSI+EHKL L GM++ G+G W  IA+ VVITK++TQV+SHAQKYF R T P   K K
Subjt:  PAVSLSSTQFPPPC----------NEVKAATHGTADSSTFKRKWSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEK

Query:  RSSIHDITEFEPELLSMVRARL
        R+SIHDIT  EPE  ++  AR+
Subjt:  RSSIHDITEFEPELLSMVRARL

XP_023522314.1 transcription factor SRM1-like [Cucurbita pepo subsp. pepo]9.1e-1755.67Show/hide
Query:  VKAATHG-TADSSTFKRKWSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDITEFEPELLSMVRARL
        V AA +G  + SS  +  W+I EHKL LVGM IFG G+W +IA+KVV+TK++ QV+SHAQK+  R  +P E++ KR SIHDI   +PELLS V ARL
Subjt:  VKAATHG-TADSSTFKRKWSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDITEFEPELLSMVRARL

TrEMBL top hitse value%identityAlignment
A0A0A0KTY5 HTH myb-type domain-containing protein2.9e-1643.44Show/hide
Query:  PAVSLSSTQFPPPC----------NEVKAATHGTADSSTFKRKWSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEK
        P +SLS+T   P            N +K   + T         WSI+EHKL L GM++ G+G W  IA+ VV+TK++TQV+SHAQKYF R T    +K K
Subjt:  PAVSLSSTQFPPPC----------NEVKAATHGTADSSTFKRKWSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEK

Query:  RSSIHDITEFEPELLSMVRARL
        R+SIHDIT  EPE  ++  +R+
Subjt:  RSSIHDITEFEPELLSMVRARL

A0A0A0KYZ4 HTH myb-type domain-containing protein3.4e-1745.9Show/hide
Query:  PAVSLSSTQFPPPC----------NEVKAATHGTADSSTFKRKWSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEK
        P +SLS+T   P            N +K   + T         WSI+EHKL L GM++ G+G W  IA+ VVITK++TQV+SHAQKYF R T P   K K
Subjt:  PAVSLSSTQFPPPC----------NEVKAATHGTADSSTFKRKWSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEK

Query:  RSSIHDITEFEPELLSMVRARL
        R+SIHDIT  EPE  ++  AR+
Subjt:  RSSIHDITEFEPELLSMVRARL

A0A1S3BZH7 myb-like protein J4.9e-1635.59Show/hide
Query:  IENIVFENKWTEMSSNQTTNTKNLDFSPFRHVYQTNADIICEN-HLRAYRSDSSSIRTAVDRGCPAVSLSSTQFPP-PCNEVKAATHGTADSSTFKRKWS
        ++++ F N+ +   + QT++     +SP       N D   ++       SD   +R  V    P +S S+T     P     +       ++  +  WS
Subjt:  IENIVFENKWTEMSSNQTTNTKNLDFSPFRHVYQTNADIICEN-HLRAYRSDSSSIRTAVDRGCPAVSLSSTQFPP-PCNEVKAATHGTADSSTFKRKWS

Query:  IQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDITEFEPELLSMVRARL
        ++EH+L L GM++ GK +W  IAD VVITK++ QV+SHAQKYF  L    + K KRSSIHDIT  EPE L+ V A L
Subjt:  IQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDITEFEPELLSMVRARL

A0A5A7TMR3 Myb-like protein J4.9e-1635.59Show/hide
Query:  IENIVFENKWTEMSSNQTTNTKNLDFSPFRHVYQTNADIICEN-HLRAYRSDSSSIRTAVDRGCPAVSLSSTQFPP-PCNEVKAATHGTADSSTFKRKWS
        ++++ F N+ +   + QT++     +SP       N D   ++       SD   +R  V    P +S S+T     P     +       ++  +  WS
Subjt:  IENIVFENKWTEMSSNQTTNTKNLDFSPFRHVYQTNADIICEN-HLRAYRSDSSSIRTAVDRGCPAVSLSSTQFPP-PCNEVKAATHGTADSSTFKRKWS

Query:  IQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDITEFEPELLSMVRARL
        ++EH+L L GM++ GK +W  IAD VVITK++ QV+SHAQKYF  L    + K KRSSIHDIT  EPE L+ V A L
Subjt:  IQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDITEFEPELLSMVRARL

A0A5D3CZL0 Myb-like protein J2.2e-1653.49Show/hide
Query:  SSTFKRKWSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDITEFEPELLSMVRARL
        ++  +  WS++EH+L L GM++ GK +W  IAD VVITK++ QV+SHAQKYF  L    + K KRSSIHDIT  EPE L+ V A L
Subjt:  SSTFKRKWSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDITEFEPELLSMVRARL

SwissProt top hitse value%identityAlignment
B8A9B2 Transcription factor MYBS13.7e-1353.85Show/hide
Query:  WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDIT
        W+ +EH+L L+G++ FGKGDW +I+   VI+++ TQV+SHAQKYF RL   + +  +RSSIHDIT
Subjt:  WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDIT

Q8LH59 Transcription factor MYBS13.7e-1353.85Show/hide
Query:  WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDIT
        W+ +EH+L L+G++ FGKGDW +I+   VI+++ TQV+SHAQKYF RL   + +  +RSSIHDIT
Subjt:  WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDIT

Q8S9H7 Transcription factor DIVARICATA1.7e-1345.56Show/hide
Query:  WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDITEFEPELLSMVRARLGLPSSSSPPSN
        W+ +EHKL L+G++ +GKGDW NI+   VIT++ TQV+SHAQKYF R  L   K ++R+SIHDIT      +++   +   P +  PPS+
Subjt:  WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDITEFEPELLSMVRARLGLPSSSSPPSN

Q9FKF9 Probable transcription factor At5g616205.9e-1144Show/hide
Query:  TADSSTFKRKWSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDIT
        TA      + W+ +EH+  L+G+   GKGDW  IA   V T++ TQV+SHAQKYF RL +  +K+++R+S+ DI+
Subjt:  TADSSTFKRKWSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDIT

Q9FNN6 Transcription factor SRM11.3e-1349.37Show/hide
Query:  GTADSSTFKRK---WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDIT
        G + S   +RK   W+  EH+L L+G++ +GKGDW +I+   V+T++ TQV+SHAQKYF RL   + K  +RSSIHDIT
Subjt:  GTADSSTFKRK---WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDIT

Arabidopsis top hitse value%identityAlignment
AT1G49010.1 Duplicated homeodomain-like superfamily protein2.6e-1453.85Show/hide
Query:  WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDIT
        W+ +EH+L L+G++ FGKGDW +I+   VI+++ TQV+SHAQKYF RL   + +  +RSSIHDIT
Subjt:  WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDIT

AT5G04760.1 Duplicated homeodomain-like superfamily protein6.3e-1649.41Show/hide
Query:  WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDITEFEPELLSMVRARLGLPSSS
        W+  EHKL L+G++ +GKGDW +I+  VV+T++ TQV+SHAQKYF R    ++K+ KRSSIHDIT         V A L +P S+
Subjt:  WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDITEFEPELLSMVRARLGLPSSS

AT5G08520.1 Duplicated homeodomain-like superfamily protein9.1e-1549.37Show/hide
Query:  GTADSSTFKRK---WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDIT
        G + S   +RK   W+  EH+L L+G++ +GKGDW +I+   V+T++ TQV+SHAQKYF RL   + K  +RSSIHDIT
Subjt:  GTADSSTFKRK---WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDIT

AT5G56840.1 myb-like transcription factor family protein1.2e-1438.05Show/hide
Query:  SSSIRTAVDRGC-PAVSLSSTQFPPPCNEVKAATHGTADSSTFKRK---WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLP
        +++I+ +    C PA S SS+ F    ++      G A  +  ++K   W+ +EH+  L+G+E  GKGDW  I+   V+TKS TQV+SHAQKYF R T  
Subjt:  SSSIRTAVDRGC-PAVSLSSTQFPPPCNEVKAATHGTADSSTFKRK---WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLP

Query:  IEKKEKRSSIHDI
        +  K +R+S+ D+
Subjt:  IEKKEKRSSIHDI

AT5G58900.1 Homeodomain-like transcriptional regulator2.0e-1456.92Show/hide
Query:  WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDIT
        W+ +EHKL L+G++ +GKGDW NI+   VIT++ TQV+SHAQKYF R  L   K ++R+SIHDIT
Subjt:  WSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIEKKEKRSSIHDIT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGAACTCGAACACCTTTGTCGATGTTAATTCTTCTTCGTCTTTTCTAAATCATTCAAAATTTATTGACCATATTGAGGAGTTTGTAATCGATTGGACTAATTTTTA
CCCTATTTCGTTCGGCACTCCATCTCCCGATTTGAATTCATCGCCCGTGATACCAGTCGAGATGACTCAATTTGTCCCGCCGTCACCACCGCCACCACCATCGCCACCTC
GTAATCAAACGATGAATATTGCGAATGGTTTTAACCCTACTTCGTTCTACATTCCGTGTCCTAATCCAGATCCAATATTGAAGAGTCAAGTTGAGATACCTCGATTTGAT
CCGACTAAAAATATGATGTTTGCGACGCCTTGGATTGCAACATCGCCATCGTCGACGCCTTCCTCGCCTTGTAATCAAACGGTAAATGGTGAGAATAATGGTTTTAATCC
TACTACGTTTGTTATGCCATGTCGTGATTCAAATCCAACACTGGAGAGGCAAGTTGAGATGTCGCAATTTGATTCAACTGAAAATATGATGTTTGCGATGCCTTGGATTG
CAACGTCACCATTGTCGTCGTCTTCCCCTCCTCGTAATGAAACGATGAATGGTGAGAATAATGGTTTTAATTCTTCTTCATTCGTTAATCCATGTCCTGATCCGAATCCA
ACACAGGAGAGACAAGTTGAGATGTCGCGATTTGATCCAATCGAAAATATGATGATTGAGAATCCATGGAGTGAAATGCAGTCGTCGTCGCCCCTGCCTTTTAATCAAAC
AATGAATCTTGAGAATAATTTAAACCCTACTCCGTTCTTTAATCCAATTCTTGATATGAATCCAACGTTCGTGAGACCAGTTGAGATGCATGCATTCAATCCGATCGAAA
ATATAGTGTTTGAGAATAAGTGGACTGAAATGTCGTCTAATCAAACTACGAATACCAAGAATCTTGATTTTAGTCCGTTTCGCCATGTATACCAAACGAATGCTGATATT
ATTTGCGAGAATCATTTAAGGGCATATCGTTCAGATTCATCTTCAATTAGAACTGCTGTTGATCGGGGCTGTCCGGCAGTATCTTTGTCGTCCACTCAATTTCCGCCGCC
GTGCAATGAAGTTAAAGCTGCGACTCACGGTACAGCCGACTCATCGACGTTTAAAAGAAAGTGGAGCATTCAAGAACACAAGTTATTACTAGTAGGAATGGAGATATTTG
GCAAAGGTGATTGGACAAACATTGCAGATAAAGTAGTGATTACAAAATCAAATACACAAGTCTCTAGCCATGCCCAAAAATATTTTTTTCGCCTCACGTTACCGATTGAG
AAAAAGGAGAAGAGGTCGAGCATTCACGATATCACCGAATTTGAACCTGAATTATTGTCGATGGTTCGTGCTCGTCTAGGTCTACCGTCATCATCGTCGCCGCCATCTAA
CGAATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGAACTCGAACACCTTTGTCGATGTTAATTCTTCTTCGTCTTTTCTAAATCATTCAAAATTTATTGACCATATTGAGGAGTTTGTAATCGATTGGACTAATTTTTA
CCCTATTTCGTTCGGCACTCCATCTCCCGATTTGAATTCATCGCCCGTGATACCAGTCGAGATGACTCAATTTGTCCCGCCGTCACCACCGCCACCACCATCGCCACCTC
GTAATCAAACGATGAATATTGCGAATGGTTTTAACCCTACTTCGTTCTACATTCCGTGTCCTAATCCAGATCCAATATTGAAGAGTCAAGTTGAGATACCTCGATTTGAT
CCGACTAAAAATATGATGTTTGCGACGCCTTGGATTGCAACATCGCCATCGTCGACGCCTTCCTCGCCTTGTAATCAAACGGTAAATGGTGAGAATAATGGTTTTAATCC
TACTACGTTTGTTATGCCATGTCGTGATTCAAATCCAACACTGGAGAGGCAAGTTGAGATGTCGCAATTTGATTCAACTGAAAATATGATGTTTGCGATGCCTTGGATTG
CAACGTCACCATTGTCGTCGTCTTCCCCTCCTCGTAATGAAACGATGAATGGTGAGAATAATGGTTTTAATTCTTCTTCATTCGTTAATCCATGTCCTGATCCGAATCCA
ACACAGGAGAGACAAGTTGAGATGTCGCGATTTGATCCAATCGAAAATATGATGATTGAGAATCCATGGAGTGAAATGCAGTCGTCGTCGCCCCTGCCTTTTAATCAAAC
AATGAATCTTGAGAATAATTTAAACCCTACTCCGTTCTTTAATCCAATTCTTGATATGAATCCAACGTTCGTGAGACCAGTTGAGATGCATGCATTCAATCCGATCGAAA
ATATAGTGTTTGAGAATAAGTGGACTGAAATGTCGTCTAATCAAACTACGAATACCAAGAATCTTGATTTTAGTCCGTTTCGCCATGTATACCAAACGAATGCTGATATT
ATTTGCGAGAATCATTTAAGGGCATATCGTTCAGATTCATCTTCAATTAGAACTGCTGTTGATCGGGGCTGTCCGGCAGTATCTTTGTCGTCCACTCAATTTCCGCCGCC
GTGCAATGAAGTTAAAGCTGCGACTCACGGTACAGCCGACTCATCGACGTTTAAAAGAAAGTGGAGCATTCAAGAACACAAGTTATTACTAGTAGGAATGGAGATATTTG
GCAAAGGTGATTGGACAAACATTGCAGATAAAGTAGTGATTACAAAATCAAATACACAAGTCTCTAGCCATGCCCAAAAATATTTTTTTCGCCTCACGTTACCGATTGAG
AAAAAGGAGAAGAGGTCGAGCATTCACGATATCACCGAATTTGAACCTGAATTATTGTCGATGGTTCGTGCTCGTCTAGGTCTACCGTCATCATCGTCGCCGCCATCTAA
CGAATGA
Protein sequenceShow/hide protein sequence
MENSNTFVDVNSSSSFLNHSKFIDHIEEFVIDWTNFYPISFGTPSPDLNSSPVIPVEMTQFVPPSPPPPPSPPRNQTMNIANGFNPTSFYIPCPNPDPILKSQVEIPRFD
PTKNMMFATPWIATSPSSTPSSPCNQTVNGENNGFNPTTFVMPCRDSNPTLERQVEMSQFDSTENMMFAMPWIATSPLSSSSPPRNETMNGENNGFNSSSFVNPCPDPNP
TQERQVEMSRFDPIENMMIENPWSEMQSSSPLPFNQTMNLENNLNPTPFFNPILDMNPTFVRPVEMHAFNPIENIVFENKWTEMSSNQTTNTKNLDFSPFRHVYQTNADI
ICENHLRAYRSDSSSIRTAVDRGCPAVSLSSTQFPPPCNEVKAATHGTADSSTFKRKWSIQEHKLLLVGMEIFGKGDWTNIADKVVITKSNTQVSSHAQKYFFRLTLPIE
KKEKRSSIHDITEFEPELLSMVRARLGLPSSSSPPSNE