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Sed0019911 (gene) of Chayote v1 genome

Gene IDSed0019911
OrganismSechium edule (Chayote v1)
Descriptioncalmodulin-like
Genome locationLG11:24132222..24132909
RNA-Seq ExpressionSed0019911
SyntenySed0019911
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060893.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]7.7e-2670.93Show/hide
Query:  EKSKSFGHQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKYNMI
        +K KS G++L +EEMK+IFRE+D NGDGRLS +ELSRAFG+FGAF P YRAA GL +AD DGDG I+E+EL+KVVDYAIKCKYN++
Subjt:  EKSKSFGHQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKYNMI

KAG6585659.1 hypothetical protein SDJN03_18392, partial [Cucurbita argyrosperma subsp. sororia]1.5e-2471.08Show/hide
Query:  KSFGHQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKYNMI
        K+    L REE+K IF+E+D NGDGRLS +ELSRAFG  GAFLP YRA RG+ IAD +GDG ITE ELDKVVDYAIKCKYN+I
Subjt:  KSFGHQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKYNMI

KAG6585660.1 Calmodulin-like protein 5, partial [Cucurbita argyrosperma subsp. sororia]6.6e-2576.92Show/hide
Query:  QLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKYNMI
        +L REE+K IFRE+D+NGDGRLS +ELSRAFG FGAFLP YRAAR +  ADA+GDG ITE+ELDKVVDYAIKCKYN+I
Subjt:  QLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKYNMI

KGN62515.1 hypothetical protein Csa_022644 [Cucumis sativus]4.5e-2667.03Show/hide
Query:  MSGKCEKSKSFGHQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKYNMI
        M+ +    K  G++L +EEMKE+FRE+D NGDGRLS +ELSRAFG FGAF P YRAA GL +AD DGDG I+E+ELDKVVDYAIKCKYN++
Subjt:  MSGKCEKSKSFGHQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKYNMI

XP_004152805.1 probable calcium-binding protein CML10 [Cucumis sativus]2.3e-2267.06Show/hide
Query:  MSGKCEKSKSFGHQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIK
        M+ +    K  G++L +EEMKE+FRE+D NGDGRLS +ELSRAFG FGAF P YRAA GL +AD DGDG I+E+ELDKVVDYAIK
Subjt:  MSGKCEKSKSFGHQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIK

TrEMBL top hitse value%identityAlignment
A0A0A0LKW4 Uncharacterized protein2.2e-2667.03Show/hide
Query:  MSGKCEKSKSFGHQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKYNMI
        M+ +    K  G++L +EEMKE+FRE+D NGDGRLS +ELSRAFG FGAF P YRAA GL +AD DGDG I+E+ELDKVVDYAIKCKYN++
Subjt:  MSGKCEKSKSFGHQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKYNMI

A0A0A0LRC1 Uncharacterized protein7.1e-1758.67Show/hide
Query:  QLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKY
        QL+RE++KEIFRE+D++GDGRLS  E+ +AFG FG+ LP+Y+A  G+  AD +GDG I E+ELDK+VDYA K ++
Subjt:  QLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKY

A0A5A7UY46 Putative calcium-binding protein CML103.8e-2670.93Show/hide
Query:  EKSKSFGHQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKYNMI
        +K KS G++L +EEMK+IFRE+D NGDGRLS +ELSRAFG+FGAF P YRAA GL +AD DGDG I+E+EL+KVVDYAIKCKYN++
Subjt:  EKSKSFGHQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKYNMI

A0A5A7UYC0 Putative calcium-binding protein CML109.3e-1758.67Show/hide
Query:  QLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKY
        QL+RE++KEIFRE+D++GDGRLS  E+ +AFG FG+ LP+Y+A  G+  AD +GDG I E+ELDK+VDYA K ++
Subjt:  QLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKY

A0A6J1CS20 calmodulin-like protein 51.1e-2262.64Show/hide
Query:  MSGKCEKSKSFGHQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKYNMI
        M+ KC K K    +L REE+K IFR +D+NGDG LS +ELSRAFG+ GA LP YRA  G+  ADADGDG IT++EL+KVVDYA+KCKY++I
Subjt:  MSGKCEKSKSFGHQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKYNMI

SwissProt top hitse value%identityAlignment
Q2QVI1 Probable calcium-binding protein CML286.0e-0536.84Show/hide
Query:  EMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKE
        E++++F+ +D NGDGR++ +EL  +F  FG F+P       +   DA+GDG +  +E
Subjt:  EMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKE

Q6L4D4 Probable calcium-binding protein CML151.7e-0441.82Show/hide
Query:  EEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSIT
        +E + +FR++D NGDGR+S  EL+  F + G  +     AR +  AD+DGDG I+
Subjt:  EEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSIT

Q6L5F4 Probable calcium-binding protein CML141.3e-0435.29Show/hide
Query:  HQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVV
        H + + ++ E+FR +D +G+G +S  EL+R+    G  L +    R +  AD DGDG I+ KE   V+
Subjt:  HQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVV

Q8L3R2 Probable calcium-binding protein CML414.2e-0635.59Show/hide
Query:  HQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSI
        HQ ++EE++++F  +D +GDG++S  EL   FG+ G ++ +  A   +   D D DGS+
Subjt:  HQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSI

Q8RZB5 Probable calcium-binding protein CML104.2e-0646.55Show/hide
Query:  EEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKE
        EEM+ +FR++D NGDGR+S  EL   F + G        AR +  ADADGDG I+  E
Subjt:  EEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKE

Arabidopsis top hitse value%identityAlignment
AT1G73630.1 EF hand calcium-binding protein family1.8e-0436.67Show/hide
Query:  TREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKE
        T  E+K++F ++D NGDG++S  EL   F + G         R L   D D DG I ++E
Subjt:  TREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKE

AT2G43290.1 Calcium-binding EF-hand family protein2.8e-0529.58Show/hide
Query:  EMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKYN
        E+K +F+ +D NGDGR++ EEL+ +    G ++P     + +   DA+GDG +   E + +    +   +N
Subjt:  EMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKYN

AT3G50770.1 calmodulin-like 413.0e-0735.59Show/hide
Query:  HQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSI
        HQ ++EE++++F  +D +GDG++S  EL   FG+ G ++ +  A   +   D D DGS+
Subjt:  HQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSI

AT3G59440.1 Calcium-binding EF-hand family protein4.7e-0532.79Show/hide
Query:  EMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKV
        ++K +F+ +D NGDGR++ EEL+ +    G F+P     + +   DA+GDG +   E + +
Subjt:  EMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTGGTAAATGCGAAAAGTCGAAGAGTTTTGGCCACCAGTTGACAAGGGAGGAAATGAAAGAAATTTTTAGGGAGTACGACCTCAATGGCGACGGCCGATTGAGCTT
CGAAGAATTGTCGAGAGCATTTGGGACGTTTGGTGCATTTCTTCCTTACTATCGTGCAGCCCGTGGCTTATGTATTGCCGATGCCGATGGAGATGGATCGATCACTGAGA
AAGAACTGGATAAGGTGGTAGATTATGCTATCAAGTGTAAGTATAACATGATATAG
mRNA sequenceShow/hide mRNA sequence
AATCAAGATAGGCATAAACCAACAAAATGGAACAAATTAAGCTATGAGAACTAAGCTCCCTTTAATAGTTCATCCACACCTCAACTTTACTTCACAATAATTCCTCAATT
TCACACAGCTTCAGGGAATCAAATGTCTGGTAAATGCGAAAAGTCGAAGAGTTTTGGCCACCAGTTGACAAGGGAGGAAATGAAAGAAATTTTTAGGGAGTACGACCTCA
ATGGCGACGGCCGATTGAGCTTCGAAGAATTGTCGAGAGCATTTGGGACGTTTGGTGCATTTCTTCCTTACTATCGTGCAGCCCGTGGCTTATGTATTGCCGATGCCGAT
GGAGATGGATCGATCACTGAGAAAGAACTGGATAAGGTGGTAGATTATGCTATCAAGTGTAAGTATAACATGATATAGTTCTCTTCCATCCTGCCATGCAGGAAAGTTTC
CTTTGAGGTGTGTTGTTTATAAATAAAACAGAACGTAATGTGTTCAAGAAACATTTGCTTTATTGTAACAGCATTTGCTAATGCAAGGAATGAAAAAAAATTCCAATAAA
TACAAAATGTATGGATGTAGAAGCAGAAAATGATTCGGTTTGGGTCGATCAGACAGATCGGTTCAGTTTTTTAGAGAAAAAAATTAATCCAACTCGAACTAAAATTGGTT
GTGGTGGAGTAAATTTATTAGTTTGGCT
Protein sequenceShow/hide protein sequence
MSGKCEKSKSFGHQLTREEMKEIFREYDLNGDGRLSFEELSRAFGTFGAFLPYYRAARGLCIADADGDGSITEKELDKVVDYAIKCKYNMI