; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0019935 (gene) of Chayote v1 genome

Gene IDSed0019935
OrganismSechium edule (Chayote v1)
DescriptionCoiled-coil domain-containing protein 9-like
Genome locationLG12:29897818..29902734
RNA-Seq ExpressionSed0019935
SyntenySed0019935
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022933792.1 uncharacterized protein LOC111441100 [Cucurbita moschata]1.6e-5081.25Show/hide
Query:  MVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQF
        M SI  FS KTL++P+A YLP+  SSSST+HS    GCRC FPNRPI++ NL+IGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEW+RPKP RRPDIFPQF
Subjt:  MVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQF

Query:  SPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK
        SPMKTPLPPPLPCDPPEED EEEEEKKEEEEENP +E PDEPEK
Subjt:  SPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK

XP_022965880.1 uncharacterized protein LOC111465629 [Cucurbita maxima]4.7e-5080.56Show/hide
Query:  MVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQF
        M SI LFS KTL++P+A YL +  SSSST+HS    GCRC FPNRPI++ NL+IG+RRTGRLVVRMAPEEEKLTRRNPLDFPIEW+RPKP RRPDIFPQF
Subjt:  MVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQF

Query:  SPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK
        SPMKTPLPPPLPCDPPEED EEEEEKKEEEEENP +E PDEPEK
Subjt:  SPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK

XP_023516602.1 uncharacterized protein LOC111780429 isoform X1 [Cucurbita pepo subsp. pepo]2.8e-5081.94Show/hide
Query:  MVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQF
        M SI L S KTL++P+A YLPI SSSSST+HSC  GGCR  FPN+PIS+ NL+I RRRTGR VVRMAPEEEK+TRRNPLDFPIEWERPKP RRPDIFPQF
Subjt:  MVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQF

Query:  SPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK
        SPMKTPLPPPLPCDPPEED EEEEEKKEEEEENP +E PDEPEK
Subjt:  SPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK

XP_023530781.1 uncharacterized protein LOC111793229 [Cucurbita pepo subsp. pepo]2.5e-5181.94Show/hide
Query:  MVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQF
        M SI LFS KTL++P+A YLP+  SSSST+HS    GCRC FPNRPI++ NL+IGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEW+RPKP RRPDIFPQF
Subjt:  MVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQF

Query:  SPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK
        SPMKTPLPPPLPCDPPEED EEEEEKKEEEEENP +E PDEPEK
Subjt:  SPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK

XP_038879472.1 uncharacterized protein LOC120071334 [Benincasa hispida]9.2e-5484.72Show/hide
Query:  MVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQF
        M SISLFS KTL++P+ATYLPI  SSSST H+C  GGCRC FPN+PIS+ NL+IGRRRTGR VVRMAPEEEKLTRRNPLDFPIEWERPKP RRPDIFPQF
Subjt:  MVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQF

Query:  SPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK
        SPMKTPLPPPLPCDPPEED EEEEEKKEEEEENP +E PDEPEK
Subjt:  SPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK

TrEMBL top hitse value%identityAlignment
A0A0A0LWI5 Uncharacterized protein1.5e-4976.92Show/hide
Query:  MVSISLFSFKTLIVPAATYLPI-SSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQ
        M SIS  + KTL++P+ TYLP+ SSSSSSTTHSC  GGC C FP +PIS+ NL+ GRRRTGR VVRMAP+EEKLTRRNPLDFP+EWERP+P RRPDIFPQ
Subjt:  MVSISLFSFKTLIVPAATYLPI-SSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQ

Query:  FSPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEP
        FSPMKTPLPPPLPCDPP E++EEEEEK+EEEEENP +E PDEP
Subjt:  FSPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEP

A0A5D3BLF1 Coiled-coil domain-containing protein 9-like5.1e-5078.91Show/hide
Query:  KPIMVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIF
        +  M SISLFS KTL+ P+ATYL I SSSSST+HSC  GGCRC FP +P+S+ NL+ GRRRTGR VVRMAPEEEKLTRRNPLDFPIEWERP+P RRPDIF
Subjt:  KPIMVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIF

Query:  PQFSPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK
        PQFSPMKTPLPPPLPCDPPEED EEEEEKKEEEEENP +E P+ PE+
Subjt:  PQFSPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK

A0A6J1F0T5 uncharacterized protein LOC1114411007.9e-5181.25Show/hide
Query:  MVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQF
        M SI  FS KTL++P+A YLP+  SSSST+HS    GCRC FPNRPI++ NL+IGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEW+RPKP RRPDIFPQF
Subjt:  MVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQF

Query:  SPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK
        SPMKTPLPPPLPCDPPEED EEEEEKKEEEEENP +E PDEPEK
Subjt:  SPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK

A0A6J1HA36 uncharacterized protein LOC111461515 isoform X12.3e-5081.25Show/hide
Query:  MVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQF
        M SI L S KTL++P+A YLPI SSSSSTTHSC  GGCR  FP++PIS+ NL++ RRRTGR VVRMAPEEEK+TRRNPLDFPIEWERPKP RRPDIFPQF
Subjt:  MVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQF

Query:  SPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK
        SPMKTPLPPPLPCDPPEED EEEEEKKEEEEENP +E PDEPEK
Subjt:  SPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK

A0A6J1HQ01 uncharacterized protein LOC1114656292.3e-5080.56Show/hide
Query:  MVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQF
        M SI LFS KTL++P+A YL +  SSSST+HS    GCRC FPNRPI++ NL+IG+RRTGRLVVRMAPEEEKLTRRNPLDFPIEW+RPKP RRPDIFPQF
Subjt:  MVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQF

Query:  SPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK
        SPMKTPLPPPLPCDPPEED EEEEEKKEEEEENP +E PDEPEK
Subjt:  SPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G17240.1 unknown protein1.3e-2960.99Show/hide
Query:  SLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRL-VVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQFSPM
        SL S + L  P+   L   +  SS + S      R F      SS +    RR   +L VV MAPEEEKLTRRNPLDFPIEWERPKP RRPDIFP+FSPM
Subjt:  SLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFPNRPISSCNLMIGRRRTGRL-VVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQFSPM

Query:  KTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK
        KTPLPPP+P DPPEED EEEEEKKEEEEENP +E+ ++PEK
Subjt:  KTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEK

AT3G24506.1 unknown protein6.6e-2677.78Show/hide
Query:  VVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPE
        VV MAPEEEKLTRRNPLDFPIEWERPKP RRPDIFP+FSPMK+PLPPP+P DPPEE+EEEEE+K+EE E++P +E  D+P+
Subjt:  VVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATGATAATTCAGCGGAGCAAAAACCGACGTTGCGCTGTGGAGAAGAAGAAAACAAGAGGCGGTCCGTTGATCTTCCAACTCCTGTCGTTGCGGCGGCGCTTTGGTT
TCGGCGGAAACCGCCACCGGAAAATTCCGCAAGACCCGACCTGACTCGACGAGGAATCTACTACCCCACAGGGGAAGAAGATAAACCCATCATGGTGTCGATTTCTCTGT
TCAGCTTCAAAACCCTAATCGTACCGGCGGCGACCTATCTACCGATATCTTCGTCATCATCGTCAACAACTCACAGTTGCAGTGCTGGTGGCTGCAGGTGCTTTTTCCCG
AACAGGCCGATTTCGAGTTGTAATTTGATGATTGGGAGAAGGAGAACGGGGAGGCTGGTGGTTCGAATGGCTCCGGAGGAGGAGAAGCTTACTCGCCGGAATCCTCTCGA
TTTCCCGATTGAGTGGGAGAGGCCTAAGCCAAGTCGTAGACCAGACATCTTTCCACAGTTTAGCCCCATGAAAACACCATTGCCGCCACCATTGCCATGTGACCCCCCTG
AAGAAGACGAGGAGGAGGAAGAAGAGAAGAAAGAGGAAGAAGAGGAAAATCCTGGCGAGGAAAAGCCGGATGAGCCTGAGAAGAATTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATGATAATTCAGCGGAGCAAAAACCGACGTTGCGCTGTGGAGAAGAAGAAAACAAGAGGCGGTCCGTTGATCTTCCAACTCCTGTCGTTGCGGCGGCGCTTTGGTT
TCGGCGGAAACCGCCACCGGAAAATTCCGCAAGACCCGACCTGACTCGACGAGGAATCTACTACCCCACAGGGGAAGAAGATAAACCCATCATGGTGTCGATTTCTCTGT
TCAGCTTCAAAACCCTAATCGTACCGGCGGCGACCTATCTACCGATATCTTCGTCATCATCGTCAACAACTCACAGTTGCAGTGCTGGTGGCTGCAGGTGCTTTTTCCCG
AACAGGCCGATTTCGAGTTGTAATTTGATGATTGGGAGAAGGAGAACGGGGAGGCTGGTGGTTCGAATGGCTCCGGAGGAGGAGAAGCTTACTCGCCGGAATCCTCTCGA
TTTCCCGATTGAGTGGGAGAGGCCTAAGCCAAGTCGTAGACCAGACATCTTTCCACAGTTTAGCCCCATGAAAACACCATTGCCGCCACCATTGCCATGTGACCCCCCTG
AAGAAGACGAGGAGGAGGAAGAAGAGAAGAAAGAGGAAGAAGAGGAAAATCCTGGCGAGGAAAAGCCGGATGAGCCTGAGAAGAATTAGACGCAATCTTTTGATGAATTC
CTTGAGTTCTTTCCCCCGTTTTCATTTTCACTTCTTTTTTTGATAGGCTGAAAGCATTAGAAATCCCAAGGGGATGATGAGCTGAGTTAGTCAACCATGAACCAGACATA
TTTGAGTGCTATGGATATTGCAATTCTATTAAATCAAAGAATCATTTTAGGATTTCCTATTCTCTTGAGTTTCAGTTCCCCACTTTAAGGCACTGTATTTTACGAATAAA
TATCATGAATGATATGCCTCGTCTCTGATTTCCAGTTCAAATGCTAGTATGTTTGAACTCAATATTTCAGTATTGTTCAAGAGAAAATCACTGGAAGATGCATTTGAGTA
TAACAACAATGGGGCTGGAGGATTCGAAACGATGACCTCTAGGCCGAGTATGCATGTTAATTACTGCTGGCCTCGGCCTACTTTCAGTAGGATATTACAAGGTCATTTCA
CATTATAATAAGACACAAATCCTAGAATGATTGTTACAATTGATTTTTGACATTTTGTACATTGAATACAACCCCTTGTTGTTTTCCAAGACTGTGACAGAATGCAATTA
TTTTTCATTAGAGAAAAACGTATTAGCTATAGGGCTAAACGACAGTTTATTGTGTGATATCAGAATTAGTATGATATATGTATATTTCTTGTTTACTTATCAGGTATTCA
GATCTACTCTTCTTGCACTCTGAATCACTTTTTTAACAATTGAGGTTCTATTTATGTAGCCTTTGACTTTGTAGCTATCCACTTGCTGTATAGTATATAGTGGTTCTCAC
TTTGTAGAGTGCTGAATGCAACTTTAAAAATTCGTTGGTTGCAAACTAACTTCTTGTGGGTACAAGTCAAACTTGCATTCCTCTCCAGGAATATTGAAAGTGCGCAGGTC
CCAGTGTCAACAGTTGATGATTTGCAGCTTCTAATCACGACGCCTTTCGCGGTTTCTCTCTATCGAAGAATCATCTACCGAGCATCTGCCTTGGCTAACTCATGAATCTT
ACTCCATTTCTGTTCAGGTCAATGGTAAGGCTGTTACTATCCCTAATTGTCCAGCCTGCAGCTTCTGTCTCGACTTTGCTTTTTTACTGCGACGTTCTTCCTCAGCATAT
GGTTTCGGAGAGATTGGTTCGACATGAATTGCTTGACCGCGAAAACTACCTTTTCCATTTTCTGGTTAGCTTTTTGAAGTGCTTTTGGTGAAGAAGGAAGAAAGGAGATG
AAAAGGGCACATCTTTTTCAGTAACCCACATGAATTTTCTCCCTCGAGTTTATTATCCGGCCTTTCTGATACCATTGGAGGCACTATATTGAAGGTTATTTTACTTTGAT
TGTGACTAAAAATTACAATAAAATGATACTATGCTTGTTGCTTTCTCTGTTGTCATTAGTTAAATGCATCTCTGTTGTTGGTAATTTCTCAGTGCTGTGCCCACTTCTTC
CCCTTCAATCGCACGTCTGATGGACATTGACCATATTCTATTATTAATTGGTCTTTAATACTCACTTTTTCATCTGTCATTTTTCTTCAACTCTTTTGATGATGTTTAAT
TAG
Protein sequenceShow/hide protein sequence
MDDNSAEQKPTLRCGEEENKRRSVDLPTPVVAAALWFRRKPPPENSARPDLTRRGIYYPTGEEDKPIMVSISLFSFKTLIVPAATYLPISSSSSSTTHSCSAGGCRCFFP
NRPISSCNLMIGRRRTGRLVVRMAPEEEKLTRRNPLDFPIEWERPKPSRRPDIFPQFSPMKTPLPPPLPCDPPEEDEEEEEEKKEEEEENPGEEKPDEPEKN