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Sed0019946 (gene) of Chayote v1 genome

Gene IDSed0019946
OrganismSechium edule (Chayote v1)
Descriptioncalmodulin-like
Genome locationLG11:24397507..24398468
RNA-Seq ExpressionSed0019946
SyntenySed0019946
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022951879.1 calmodulin-like [Cucurbita moschata]7.4e-2059.55Show/hide
Query:  KALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLIDYAE
        KA K PAK   + G  M+L+R  IK+IF EHD+DGDGY+   ELT AF F GS ++P Y A  G+A ADA+GDG ISEEEL+KL+DYAE
Subjt:  KALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLIDYAE

XP_022951880.1 calmodulin-like [Cucurbita moschata]7.4e-2036.15Show/hide
Query:  DELFRKYDKNGDGIITKEELTGFFSQSKSHGSKPLLPSKPLPPKKNTNYSKPNEKANEPHAYAPTVILKAQQLPKENVQAKATAKANESEANTHKVKEPT
        + L +KYDKNGD I+TK+ELT    +  S                                         QQ P +++  K                 P 
Subjt:  DELFRKYDKNGDGIITKEELTGFFSQSKSHGSKPLLPSKPLPPKKNTNYSKPNEKANEPHAYAPTVILKAQQLPKENVQAKATAKANESEANTHKVKEPT

Query:  KKHGAKANEDPWIKLPAKMFEDKALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISE
        KK             PAK+ EDK L             MRL+R  I+DIF EHD+DGDGY++  ELT AF F+GS +LP Y A  G+  ADA+GDGRISE
Subjt:  KKHGAKANEDPWIKLPAKMFEDKALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISE

Query:  EELDKLIDYAEEI
        EEL+KL+DYAE +
Subjt:  EELDKLIDYAEEI

XP_023002888.1 calmodulin-like [Cucurbita maxima]7.4e-2059.55Show/hide
Query:  KALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLIDYAE
        KA K PAK   + G  M+L+R  IK+IF EHD+DGDGY+   ELT AF F GS ++P Y A  G+A ADA+GDG ISEEEL+KL+DYAE
Subjt:  KALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLIDYAE

XP_023002889.1 calmodulin-A-like [Cucurbita maxima]7.4e-2035.68Show/hide
Query:  DELFRKYDKNGDGIITKEELTGFFSQSKSHGSKPLLPSKPLPPKKNTNYSKPNEKANEPHAYAPTVILKAQQLPKENVQAKATAKANESEANTHKVKEPT
        + L +KYDKNGD I+TK+ELT                                E+A++   +   V+ K    PK+N                       
Subjt:  DELFRKYDKNGDGIITKEELTGFFSQSKSHGSKPLLPSKPLPPKKNTNYSKPNEKANEPHAYAPTVILKAQQLPKENVQAKATAKANESEANTHKVKEPT

Query:  KKHGAKANEDPWIKLPAKMFEDKALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISE
                       PAK+ EDK L             MRL+R  I+DIF EHD+DGDGY++  ELT AF F+GS +LP Y A  G+  ADA+GDGRISE
Subjt:  KKHGAKANEDPWIKLPAKMFEDKALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISE

Query:  EELDKLIDYAEEI
        EEL KL+DYAE +
Subjt:  EELDKLIDYAEEI

XP_023537874.1 probable calcium-binding protein CML11 [Cucurbita pepo subsp. pepo]1.6e-1936.15Show/hide
Query:  DELFRKYDKNGDGIITKEELTGFFSQSKSHGSKPLLPSKPLPPKKNTNYSKPNEKANEPHAYAPTVILKAQQLPKENVQAKATAKANESEANTHKVKEPT
        + L +KYDKNGD I+TK+ELT    +  S                                         QQ P +++  K                 P 
Subjt:  DELFRKYDKNGDGIITKEELTGFFSQSKSHGSKPLLPSKPLPPKKNTNYSKPNEKANEPHAYAPTVILKAQQLPKENVQAKATAKANESEANTHKVKEPT

Query:  KKHGAKANEDPWIKLPAKMFEDKALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISE
        KK             PAK+ EDK L             MRL+R  I+DIF EHD+DGDGY++  ELT AF F+GS +LP Y A  G+  ADA+GDGRISE
Subjt:  KKHGAKANEDPWIKLPAKMFEDKALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISE

Query:  EELDKLIDYAEEI
        EEL KL+DYAE +
Subjt:  EELDKLIDYAEEI

TrEMBL top hitse value%identityAlignment
A0A6J1GK16 calmodulin-like3.6e-2059.55Show/hide
Query:  KALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLIDYAE
        KA K PAK   + G  M+L+R  IK+IF EHD+DGDGY+   ELT AF F GS ++P Y A  G+A ADA+GDG ISEEEL+KL+DYAE
Subjt:  KALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLIDYAE

A0A6J1GK54 calmodulin-like3.6e-2036.15Show/hide
Query:  DELFRKYDKNGDGIITKEELTGFFSQSKSHGSKPLLPSKPLPPKKNTNYSKPNEKANEPHAYAPTVILKAQQLPKENVQAKATAKANESEANTHKVKEPT
        + L +KYDKNGD I+TK+ELT    +  S                                         QQ P +++  K                 P 
Subjt:  DELFRKYDKNGDGIITKEELTGFFSQSKSHGSKPLLPSKPLPPKKNTNYSKPNEKANEPHAYAPTVILKAQQLPKENVQAKATAKANESEANTHKVKEPT

Query:  KKHGAKANEDPWIKLPAKMFEDKALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISE
        KK             PAK+ EDK L             MRL+R  I+DIF EHD+DGDGY++  ELT AF F+GS +LP Y A  G+  ADA+GDGRISE
Subjt:  KKHGAKANEDPWIKLPAKMFEDKALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISE

Query:  EELDKLIDYAEEI
        EEL+KL+DYAE +
Subjt:  EELDKLIDYAEEI

A0A6J1KRR4 calmodulin-A-like3.6e-2035.68Show/hide
Query:  DELFRKYDKNGDGIITKEELTGFFSQSKSHGSKPLLPSKPLPPKKNTNYSKPNEKANEPHAYAPTVILKAQQLPKENVQAKATAKANESEANTHKVKEPT
        + L +KYDKNGD I+TK+ELT                                E+A++   +   V+ K    PK+N                       
Subjt:  DELFRKYDKNGDGIITKEELTGFFSQSKSHGSKPLLPSKPLPPKKNTNYSKPNEKANEPHAYAPTVILKAQQLPKENVQAKATAKANESEANTHKVKEPT

Query:  KKHGAKANEDPWIKLPAKMFEDKALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISE
                       PAK+ EDK L             MRL+R  I+DIF EHD+DGDGY++  ELT AF F+GS +LP Y A  G+  ADA+GDGRISE
Subjt:  KKHGAKANEDPWIKLPAKMFEDKALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISE

Query:  EELDKLIDYAEEI
        EEL KL+DYAE +
Subjt:  EELDKLIDYAEEI

A0A6J1KUA8 calcium-binding protein H-like isoform X12.8e-1734.53Show/hide
Query:  SQFSSLTLEQVDELFRKYDKNGDGIITKEELTGFFSQSKSHGSKPLLPSKPLPPKKNTNYSKPNEKANEPHAYAPTVILKAQQLPKENVQAKATAKANES
        S+F +   ++ + L +KYD NGDG++TKEEL  F    K+ GSK L                     N+   +         ++PK N        A+E 
Subjt:  SQFSSLTLEQVDELFRKYDKNGDGIITKEELTGFFSQSKSHGSKPLLPSKPLPPKKNTNYSKPNEKANEPHAYAPTVILKAQQLPKENVQAKATAKANES

Query:  EANTHKVKEPTKKHGAKANEDPWIKLPAKMFEDKALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIAR
         +N+H       KH              K  +DK  K+  K        +RL+RE +K+IF+ HD + DG++D  E+T AF FLGS +LP   A   +A 
Subjt:  EANTHKVKEPTKKHGAKANEDPWIKLPAKMFEDKALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIAR

Query:  ADANGDGRISEEELDKLIDYAEE
        AD N DG ISE ELDKLIDYA +
Subjt:  ADANGDGRISEEELDKLIDYAEE

A0A6J1KUW2 calmodulin-like3.6e-2059.55Show/hide
Query:  KALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLIDYAE
        KA K PAK   + G  M+L+R  IK+IF EHD+DGDGY+   ELT AF F GS ++P Y A  G+A ADA+GDG ISEEEL+KL+DYAE
Subjt:  KALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLIDYAE

SwissProt top hitse value%identityAlignment
P05933 Calmodulin4.5e-0437.88Show/hide
Query:  NREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI
        N E +++ F+  D DG+GYI   ELT     LG ++    +A + I  AD +GDG I+ EE  ++I
Subjt:  NREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI

P84339 Calmodulin4.5e-0439.39Show/hide
Query:  NREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI
        + E IK+ F+  D DG+GYI   EL      LG K+    +  E I  AD +GDG+I+ EE  K++
Subjt:  NREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI

Q9HFY6 Calmodulin5.9e-0439.39Show/hide
Query:  NREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI
        + E IK+ F+  D DG+GYI   EL      LG K+    +  E I  AD +GDG+I+ EE  K++
Subjt:  NREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI

Q9JLK3 Calcium-binding protein 51.6e-0440Show/hide
Query:  EHIKDIFREHDVDGDGYIDYGELTMAF-HFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI
        + ++D F+E D +GDG I   EL  A    LG K+ P  +A E +  AD NGDG +  EE  K++
Subjt:  EHIKDIFREHDVDGDGYIDYGELTMAF-HFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI

Q9N1Q8 Calcium-binding protein 53.5e-0437.5Show/hide
Query:  EHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI
        + ++D F+E D +GDG I  GEL  A   L    L      E +  AD NGDG +  EE  K++
Subjt:  EHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI

Arabidopsis top hitse value%identityAlignment
AT1G18530.1 EF hand calcium-binding protein family2.7e-0435.53Show/hide
Query:  LPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI
        LP     + +N E + +IF+  D DG+G+I   EL  A   +G  +    L  E I  AD NGDG IS  E   ++
Subjt:  LPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI

AT1G32250.1 Calcium-binding EF-hand family protein4.6e-0436.49Show/hide
Query:  EHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLIDYA--EEIYG
        E +  +FR  D DG+G+I   EL  +   LG  +    L    I  AD++GDGRI+ +E  K I+ A  ++I+G
Subjt:  EHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLIDYA--EEIYG

AT1G66410.1 calmodulin 46.1e-0437.88Show/hide
Query:  NREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI
        + E +K+ FR  D D +G+I   EL      LG K L      E I  AD +GDG+I+ EE  K++
Subjt:  NREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI

AT1G66410.2 calmodulin 46.1e-0437.88Show/hide
Query:  NREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI
        + E +K+ FR  D D +G+I   EL      LG K L      E I  AD +GDG+I+ EE  K++
Subjt:  NREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI

AT5G37780.1 calmodulin 16.1e-0437.88Show/hide
Query:  NREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI
        + E +K+ FR  D D +G+I   EL      LG K L      E I  AD +GDG+I+ EE  K++
Subjt:  NREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELDKLI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACTCGTTATAGCCAATTTTCCTCTCTTACTCTTGAACAAGTGGATGAGTTGTTCAGAAAGTATGATAAAAATGGTGATGGTATAATCACCAAAGAAGAGCTCAC
TGGATTTTTCTCTCAATCTAAGAGCCATGGATCCAAGCCATTGCTTCCATCCAAACCCCTACCGCCGAAAAAAAACACTAACTACTCGAAGCCAAACGAAAAGGCCAACG
AGCCTCATGCGTATGCGCCTACGGTGATATTAAAGGCTCAGCAACTGCCGAAAGAAAATGTCCAAGCCAAAGCAACCGCCAAAGCCAACGAGAGCGAAGCGAATACGCAC
AAGGTGAAGGAGCCTACAAAGAAGCATGGGGCTAAAGCCAATGAAGATCCTTGGATAAAACTGCCAGCAAAGATGTTTGAAGACAAGGCACTAAAAGCCCCAGCAAAAGA
CTTGCCGAAGAACGGACCGGTTATGCGTCTAAATCGAGAACATATTAAGGATATTTTTAGGGAACACGATGTCGATGGTGATGGTTATATCGACTATGGCGAGCTAACCA
TGGCATTTCACTTCTTAGGCTCGAAAGTTCTTCCCTGTTACTTGGCGCGCGAAGGTATAGCTCGTGCGGATGCTAATGGAGATGGGCGCATCAGCGAGGAAGAGCTTGAC
AAACTCATCGACTATGCTGAAGAAATCTACGGGGACGATTTGGTTTTTTAA
mRNA sequenceShow/hide mRNA sequence
ATCTCCATCTAAAGAAACTAAACAAATAAGGCCCTTAGTTTTTCTTTTCCTCTCTTCTTTTCTTGTTGTTAACAATGTCAACTCGTTATAGCCAATTTTCCTCTCTTACT
CTTGAACAAGTGGATGAGTTGTTCAGAAAGTATGATAAAAATGGTGATGGTATAATCACCAAAGAAGAGCTCACTGGATTTTTCTCTCAATCTAAGAGCCATGGATCCAA
GCCATTGCTTCCATCCAAACCCCTACCGCCGAAAAAAAACACTAACTACTCGAAGCCAAACGAAAAGGCCAACGAGCCTCATGCGTATGCGCCTACGGTGATATTAAAGG
CTCAGCAACTGCCGAAAGAAAATGTCCAAGCCAAAGCAACCGCCAAAGCCAACGAGAGCGAAGCGAATACGCACAAGGTGAAGGAGCCTACAAAGAAGCATGGGGCTAAA
GCCAATGAAGATCCTTGGATAAAACTGCCAGCAAAGATGTTTGAAGACAAGGCACTAAAAGCCCCAGCAAAAGACTTGCCGAAGAACGGACCGGTTATGCGTCTAAATCG
AGAACATATTAAGGATATTTTTAGGGAACACGATGTCGATGGTGATGGTTATATCGACTATGGCGAGCTAACCATGGCATTTCACTTCTTAGGCTCGAAAGTTCTTCCCT
GTTACTTGGCGCGCGAAGGTATAGCTCGTGCGGATGCTAATGGAGATGGGCGCATCAGCGAGGAAGAGCTTGACAAACTCATCGACTATGCTGAAGAAATCTACGGGGAC
GATTTGGTTTTTTAAGTTTTAGTTAAATAAGAATGGAAACATAGGATAAAAATTGTCCTCTTTTTTCTTTCTTTTTAATCAGAATAAAGTGATGTACTCGGCGTGGCATA
TTATGGTTGCATTTTAATTATATTATATGAAAGTGTGCACTACAATGTTACATTATTTTCTGTTTTAATTATGCGGTTGTGG
Protein sequenceShow/hide protein sequence
MSTRYSQFSSLTLEQVDELFRKYDKNGDGIITKEELTGFFSQSKSHGSKPLLPSKPLPPKKNTNYSKPNEKANEPHAYAPTVILKAQQLPKENVQAKATAKANESEANTH
KVKEPTKKHGAKANEDPWIKLPAKMFEDKALKAPAKDLPKNGPVMRLNREHIKDIFREHDVDGDGYIDYGELTMAFHFLGSKVLPCYLAREGIARADANGDGRISEEELD
KLIDYAEEIYGDDLVF