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Sed0019953 (gene) of Chayote v1 genome

Gene IDSed0019953
OrganismSechium edule (Chayote v1)
Descriptionserine/arginine repetitive matrix protein 1
Genome locationLG04:36759853..36768870
RNA-Seq ExpressionSed0019953
SyntenySed0019953
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008459744.1 PREDICTED: uncharacterized protein LOC103498786 [Cucumis melo]1.6e-3561.35Show/hide
Query:  MWAASL---SPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNP----NRTPKQES---AAEISGSDVLRALQKA
        MWAAS    SPS R L I T PPP  PVS    K+ PPK DAENT PN + +IK+ GHKILSAV SP P      TPK ES   A +ISGSDVLRALQKA
Subjt:  MWAASL---SPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNP----NRTPKQES---AAEISGSDVLRALQKA

Query:  AAVKEKNIIRQAKE--KKKEASADADGTESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDTG
        AAVKEKN  +Q KE  KKK+  A  + + SE N  VRPL+IK DWGLRLT+LEKRL EMS+ G
Subjt:  AAVKEKNIIRQAKE--KKKEASADADGTESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDTG

XP_022959476.1 uncharacterized protein LOC111460438 [Cucurbita moschata]1.4e-3964.81Show/hide
Query:  MWAA---SLSPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNP-NRTP--KQES---AAEISGSDVLRALQKAA
        MW A   S SPSC  L +PTRPPP  PVSAI  KAQPP+TDA+N TPN + SIK+ GHKILSA  S NP +R+P  KQES    A+ISG DVLRALQKAA
Subjt:  MWAA---SLSPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNP-NRTP--KQES---AAEISGSDVLRALQKAA

Query:  AVKEKNIIRQAKEKKKEASADADGT---ESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDT
        AVKEKN  RQ KE+KK+     +G+    SE NR VRPLRIK+DWGLRLTELEKRL+E+S+T
Subjt:  AVKEKNIIRQAKEKKKEASADADGT---ESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDT

XP_023006674.1 uncharacterized protein LOC111499329 [Cucurbita maxima]5.3e-3965.43Show/hide
Query:  MWAA---SLSPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNP-NRTP--KQES---AAEISGSDVLRALQKAA
        MWAA   S SPSC  L +PTRP P  PVSAI  KAQPP TDA+N TPN + SIK+ GHKILSA KS NP +R+P  KQES    A+ISG DVLRALQKAA
Subjt:  MWAA---SLSPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNP-NRTP--KQES---AAEISGSDVLRALQKAA

Query:  AVKEKNIIRQAKEKKKEASADADGT---ESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDT
        AVKEKN  RQ KE+KK+     +G+    SE NR VRPLRIK+DWGLRLTELEKRL+E+S+T
Subjt:  AVKEKNIIRQAKEKKKEASADADGT---ESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDT

XP_023547620.1 uncharacterized protein LOC111806506 [Cucurbita pepo subsp. pepo]1.2e-3864.2Show/hide
Query:  MWAA---SLSPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPN-PNRTP--KQES---AAEISGSDVLRALQKAA
        MWAA   S SPSC  L +PTRPPP  PVSAI  KAQPP+TDA+N TPN + SIK+ GHKILSA  S N  +R+P  KQES    A+ISG DVLRALQKAA
Subjt:  MWAA---SLSPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPN-PNRTP--KQES---AAEISGSDVLRALQKAA

Query:  AVKEKNIIRQAKEKKKEASADADGT---ESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDT
        AVKEKN IRQ +E+KK+     +G+    SE NR VRPLRIK+DWGLRL ELEKRL+E+S+T
Subjt:  AVKEKNIIRQAKEKKKEASADADGT---ESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDT

XP_038906928.1 uncharacterized protein LOC120092795 [Benincasa hispida]4.5e-3862.58Show/hide
Query:  MWAASL---SPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNP--------NRTPKQES---AAEISGSDVLRA
        MWAAS    +PSC  L I TRP P  PVSAI  ++QPPKTDA NTTPN + SIK+ GHKILSAV SPNP          TPKQE+   AA+ISGSD+LRA
Subjt:  MWAASL---SPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNP--------NRTPKQES---AAEISGSDVLRA

Query:  LQKAAAVKEKNIIRQAKEKKKEASADADGTESETNRGVRPLRIKSDWGLRLTELEKRLKEMSD
        LQKAAAVKEKN  RQ K KKKE     +G+ SE N  VRPL+IK DWGLRL++LEKRL+E S+
Subjt:  LQKAAAVKEKNIIRQAKEKKKEASADADGTESETNRGVRPLRIKSDWGLRLTELEKRLKEMSD

TrEMBL top hitse value%identityAlignment
A0A1S3CAW4 uncharacterized protein LOC1034987867.7e-3661.35Show/hide
Query:  MWAASL---SPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNP----NRTPKQES---AAEISGSDVLRALQKA
        MWAAS    SPS R L I T PPP  PVS    K+ PPK DAENT PN + +IK+ GHKILSAV SP P      TPK ES   A +ISGSDVLRALQKA
Subjt:  MWAASL---SPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNP----NRTPKQES---AAEISGSDVLRALQKA

Query:  AAVKEKNIIRQAKE--KKKEASADADGTESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDTG
        AAVKEKN  +Q KE  KKK+  A  + + SE N  VRPL+IK DWGLRLT+LEKRL EMS+ G
Subjt:  AAVKEKNIIRQAKE--KKKEASADADGTESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDTG

A0A5D3DMB8 Chaperone ClpB7.7e-3661.35Show/hide
Query:  MWAASL---SPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNP----NRTPKQES---AAEISGSDVLRALQKA
        MWAAS    SPS R L I T PPP  PVS    K+ PPK DAENT PN + +IK+ GHKILSAV SP P      TPK ES   A +ISGSDVLRALQKA
Subjt:  MWAASL---SPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNP----NRTPKQES---AAEISGSDVLRALQKA

Query:  AAVKEKNIIRQAKE--KKKEASADADGTESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDTG
        AAVKEKN  +Q KE  KKK+  A  + + SE N  VRPL+IK DWGLRLT+LEKRL EMS+ G
Subjt:  AAVKEKNIIRQAKE--KKKEASADADGTESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDTG

A0A6J1DX20 serine/arginine repetitive matrix protein 14.2e-3459.51Show/hide
Query:  MWA---ASLSPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNPNR---TPKQESAAE-----ISGSDVLRALQK
        MWA   AS SPSCR   +PT+PP   P+ AI  K+ PPKT AE+ TP+ N S+K++GH ILSAVKSP PN+   TPKQES AE     + GSDVL ALQK
Subjt:  MWA---ASLSPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNPNR---TPKQESAAE-----ISGSDVLRALQK

Query:  AAAVKEKNIIRQAKEKKKE--ASADADGTESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDT
        AAA KEKN  R+  +KKK+   S  A+   S  NRGVRPLRI SDWG RL+ELEKRL+E+SDT
Subjt:  AAAVKEKNIIRQAKEKKKE--ASADADGTESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDT

A0A6J1H4Y8 uncharacterized protein LOC1114604386.8e-4064.81Show/hide
Query:  MWAA---SLSPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNP-NRTP--KQES---AAEISGSDVLRALQKAA
        MW A   S SPSC  L +PTRPPP  PVSAI  KAQPP+TDA+N TPN + SIK+ GHKILSA  S NP +R+P  KQES    A+ISG DVLRALQKAA
Subjt:  MWAA---SLSPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNP-NRTP--KQES---AAEISGSDVLRALQKAA

Query:  AVKEKNIIRQAKEKKKEASADADGT---ESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDT
        AVKEKN  RQ KE+KK+     +G+    SE NR VRPLRIK+DWGLRLTELEKRL+E+S+T
Subjt:  AVKEKNIIRQAKEKKKEASADADGT---ESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDT

A0A6J1L2U1 uncharacterized protein LOC1114993292.6e-3965.43Show/hide
Query:  MWAA---SLSPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNP-NRTP--KQES---AAEISGSDVLRALQKAA
        MWAA   S SPSC  L +PTRP P  PVSAI  KAQPP TDA+N TPN + SIK+ GHKILSA KS NP +R+P  KQES    A+ISG DVLRALQKAA
Subjt:  MWAA---SLSPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNP-NRTP--KQES---AAEISGSDVLRALQKAA

Query:  AVKEKNIIRQAKEKKKEASADADGT---ESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDT
        AVKEKN  RQ KE+KK+     +G+    SE NR VRPLRIK+DWGLRLTELEKRL+E+S+T
Subjt:  AVKEKNIIRQAKEKKKEASADADGT---ESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G46735.1 unknown protein3.6e-0937.07Show/hide
Query:  TTPNTNISIKTIGHKILSAVKSPNPNRTPKQESAAEISGSDVLRALQKAAAVKEKNIIRQAKEKKKEASADADGTESETN-------RGVRPLRIKSDWG
        T   T+ S+  +G +IL      NP +   +E+  EISGSDVL A+Q+A A +++    + K K + +  +   +  E           V PLRIKSDWG
Subjt:  TTPNTNISIKTIGHKILSAVKSPNPNRTPKQESAAEISGSDVLRALQKAAAVKEKNIIRQAKEKKKEASADADGTESETN-------RGVRPLRIKSDWG

Query:  LRLTELEKRLKEMSDT
         RL E EK LKE  +T
Subjt:  LRLTELEKRLKEMSDT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGGCCGCCTCGTTAAGCCCATCCTGCCGCCACCTCACGATTCCGACCAGACCGCCGCCCCGCGTTCCGGTCTCCGCCATCTCCGGCAAGGCTCAACCACCCAAAAC
CGACGCCGAAAACACCACACCAAACACCAACATCAGCATCAAAACCATCGGCCACAAAATTCTCTCAGCCGTGAAGTCCCCAAACCCTAATCGGACTCCGAAACAGGAAT
CGGCTGCAGAAATTAGTGGCTCCGATGTTCTTAGGGCATTGCAAAAGGCGGCTGCCGTGAAGGAGAAGAACATAATCCGACAAGCGAAAGAGAAGAAGAAAGAAGCTTCC
GCCGACGCCGATGGGACTGAGTCTGAGACCAACCGCGGGGTTAGGCCCCTCAGGATCAAGAGCGATTGGGGATTGAGGCTCACCGAATTGGAGAAACGCCTCAAGGAGAT
GTCGGATACGGGTATTATCTACTTTTCCTCGAACAGAAACTTGTCTTTGCCCACAAAGAATGTCATCGCCGATTCAACTTCCAGCAGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGTGGGCCGCCTCGTTAAGCCCATCCTGCCGCCACCTCACGATTCCGACCAGACCGCCGCCCCGCGTTCCGGTCTCCGCCATCTCCGGCAAGGCTCAACCACCCAAAAC
CGACGCCGAAAACACCACACCAAACACCAACATCAGCATCAAAACCATCGGCCACAAAATTCTCTCAGCCGTGAAGTCCCCAAACCCTAATCGGACTCCGAAACAGGAAT
CGGCTGCAGAAATTAGTGGCTCCGATGTTCTTAGGGCATTGCAAAAGGCGGCTGCCGTGAAGGAGAAGAACATAATCCGACAAGCGAAAGAGAAGAAGAAAGAAGCTTCC
GCCGACGCCGATGGGACTGAGTCTGAGACCAACCGCGGGGTTAGGCCCCTCAGGATCAAGAGCGATTGGGGATTGAGGCTCACCGAATTGGAGAAACGCCTCAAGGAGAT
GTCGGATACGGGTATTATCTACTTTTCCTCGAACAGAAACTTGTCTTTGCCCACAAAGAATGTCATCGCCGATTCAACTTCCAGCAGGTAG
Protein sequenceShow/hide protein sequence
MWAASLSPSCRHLTIPTRPPPRVPVSAISGKAQPPKTDAENTTPNTNISIKTIGHKILSAVKSPNPNRTPKQESAAEISGSDVLRALQKAAAVKEKNIIRQAKEKKKEAS
ADADGTESETNRGVRPLRIKSDWGLRLTELEKRLKEMSDTGIIYFSSNRNLSLPTKNVIADSTSSR