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Sed0019961 (gene) of Chayote v1 genome

Gene IDSed0019961
OrganismSechium edule (Chayote v1)
DescriptionCACTA en-spm transposon protein
Genome locationLG07:15269871..15272373
RNA-Seq ExpressionSed0019961
SyntenySed0019961
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA8538994.1 hypothetical protein F0562_025686 [Nyssa sinensis]2.5e-0738.16Show/hide
Query:  KKRKETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIVKGMGY
        ++  ET  Q   +++W     + VKGW    A E++++MIALQ  PTPEGS P+   +IC  VLG     ++G+G+
Subjt:  KKRKETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIVKGMGY

RVW69898.1 hypothetical protein CK203_059139 [Vitis vinifera]3.3e-0734.58Show/hide
Query:  MALGSNRAYRGYNTGKQLD---KRVTNHGKKRKETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIV
        +AL     Y+  +  KQ D    R  +   + + TG  L  +EL+  +   S  GW   +A   + KM+ LQ+ P PEG Q + ++EIC  VLG RS  +
Subjt:  MALGSNRAYRGYNTGKQLD---KRVTNHGKKRKETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIV

Query:  KGMGYLP
        KG+G+ P
Subjt:  KGMGYLP

RVW71840.1 hypothetical protein CK203_061113 [Vitis vinifera]3.3e-0734.58Show/hide
Query:  MALGSNRAYRGYNTGKQLD---KRVTNHGKKRKETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIV
        +AL     Y+  +  KQ D    R  +   + + TG     +EL+  +   S  GW   +A   +EKM+ LQ+ P PEG Q + ++EIC  VLG RS  +
Subjt:  MALGSNRAYRGYNTGKQLD---KRVTNHGKKRKETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIV

Query:  KGMGYLP
        KG+G+ P
Subjt:  KGMGYLP

RVW93403.1 hypothetical protein CK203_035135 [Vitis vinifera]3.3e-0734.58Show/hide
Query:  MALGSNRAYRGYNTGKQLD---KRVTNHGKKRKETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIV
        +AL     Y+  +  KQ D    R  +   + + TG     +EL+  +   S  GW   +A   +EKM+ LQ+ P PEG Q + ++EIC  VLG RS  +
Subjt:  MALGSNRAYRGYNTGKQLD---KRVTNHGKKRKETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIV

Query:  KGMGYLP
        KG+G+ P
Subjt:  KGMGYLP

RWR86313.1 Transposase, Ptta/En/Spm, plant [Cinnamomum micranthum f. kanehirae]3.9e-0844.78Show/hide
Query:  LDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIVKGMGY
        +  +ELWH       KGW  P+   L+EKMI LQ  PT + S P+T  EIC  VLG R   V+G+G+
Subjt:  LDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIVKGMGY

TrEMBL top hitse value%identityAlignment
A0A443P6A9 Transposase, Ptta/En/Spm, plant1.9e-0844.78Show/hide
Query:  LDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIVKGMGY
        +  +ELWH       KGW  P+   L+EKMI LQ  PT + S P+T  EIC  VLG R   V+G+G+
Subjt:  LDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIVKGMGY

A0A5B6ZAY8 Uncharacterized protein3.8e-0941.03Show/hide
Query:  HGKKRKETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIVKGMGY
        H  + KET    D +++WH       KGW      E + +M+A Q  PTPEGS+P+T  EIC  VLG R+  + GMG+
Subjt:  HGKKRKETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIVKGMGY

A0A5B6ZBC3 Uncharacterized protein6.5e-0942.47Show/hide
Query:  KETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIVKGMGY
        KET    D +++WH       KGW      E + +M+A Q  PTPEGS+P+T  EIC  VLG R+  + GMG+
Subjt:  KETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIVKGMGY

A0A5B6ZBJ5 Uncharacterized protein3.8e-0941.03Show/hide
Query:  HGKKRKETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIVKGMGY
        H  + KET    D +++WH       KGW      E + +M+A Q  PTPEGS+P+T  EIC  VLG R+  + GMG+
Subjt:  HGKKRKETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIVKGMGY

A0A5J5B8Q0 Uncharacterized protein1.2e-0738.16Show/hide
Query:  KKRKETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIVKGMGY
        ++  ET  Q   +++W     + VKGW    A E++++MIALQ  PTPEGS P+   +IC  VLG     ++G+G+
Subjt:  KKRKETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIVKGMGY

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATTAGGTAGCAACCGAGCTTATCGAGGCTACAACACTGGGAAACAATTGGACAAGCGCGTGACCAATCACGGTAAGAAAAGGAAAGAAACTGGTACTCAACTAGA
CGCAGTGGAACTGTGGCATGATGTTCGAAACCATTCAGTGAAGGGATGGCCAGGTCCTAAAGCCGTTGAGCTTCACGAAAAGATGATAGCCCTGCAAGAAGCACCAACTC
CTGAGGGGTCCCAACCTATGACTCAGTCAGAAATTTGTGCAACTGTGTTAGGGCATCGTTCTGACATAGTTAAGGGTATGGGTTATCTCCCTTATGGAAGGAGATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCATTAGGTAGCAACCGAGCTTATCGAGGCTACAACACTGGGAAACAATTGGACAAGCGCGTGACCAATCACGGTAAGAAAAGGAAAGAAACTGGTACTCAACTAGA
CGCAGTGGAACTGTGGCATGATGTTCGAAACCATTCAGTGAAGGGATGGCCAGGTCCTAAAGCCGTTGAGCTTCACGAAAAGATGATAGCCCTGCAAGAAGCACCAACTC
CTGAGGGGTCCCAACCTATGACTCAGTCAGAAATTTGTGCAACTGTGTTAGGGCATCGTTCTGACATAGTTAAGGGTATGGGTTATCTCCCTTATGGAAGGAGATAA
Protein sequenceShow/hide protein sequence
MALGSNRAYRGYNTGKQLDKRVTNHGKKRKETGTQLDAVELWHDVRNHSVKGWPGPKAVELHEKMIALQEAPTPEGSQPMTQSEICATVLGHRSDIVKGMGYLPYGRR