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Sed0019978 (gene) of Chayote v1 genome

Gene IDSed0019978
OrganismSechium edule (Chayote v1)
DescriptionUnknown protein
Genome locationLG13:9112703..9115046
RNA-Seq ExpressionSed0019978
SyntenySed0019978
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6577325.1 hypothetical protein SDJN03_24899, partial [Cucurbita argyrosperma subsp. sororia]2.5e-3489.66Show/hide
Query:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPTRCSDKF
        M+TPPSLLSL I SAIHNLSR SDLS LPDH+VLDLFLETLRAGKLN+RVLKLFVA+GKDEVLSLIEAFNIQQIVTPVLPTRCS+KF
Subjt:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPTRCSDKF

KAG7015413.1 putative UDP-arabinopyranose mutase 5 [Cucurbita argyrosperma subsp. argyrosperma]1.0e-3089.02Show/hide
Query:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPTR
        M+TPPSLLSL I SAIHNLSR SDLS LPDH+VLDLFLETLRAGKLN+RVLKLFVA+GKDEVLSLIEAFNIQQIVTPVLPT+
Subjt:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPTR

XP_022984322.1 probable UDP-arabinopyranose mutase 5 isoform X2 [Cucurbita maxima]1.7e-3090.12Show/hide
Query:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPT
        M+TPPSLLSL I SAIHNLSR SDLS LPDH+VLDLFLETLRAGKLN+RVLKLFVA+GKDEVLSLIEAFNIQQIVTPVLPT
Subjt:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPT

XP_038904959.1 uncharacterized protein LOC120091153 isoform X1 [Benincasa hispida]1.8e-3287.5Show/hide
Query:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFL-ETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPTRCSDKF
        M+TPPSLLSL I SAIHNLSR SDLS LPDHIVLDLFL ETLRAGKLN+R+LKLFVASGKDEVL LIEAFNIQQ+VTPVLPTRCS+KF
Subjt:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFL-ETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPTRCSDKF

XP_038904960.1 uncharacterized protein LOC120091153 isoform X2 [Benincasa hispida]7.4e-3488.51Show/hide
Query:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPTRCSDKF
        M+TPPSLLSL I SAIHNLSR SDLS LPDHIVLDLFLETLRAGKLN+R+LKLFVASGKDEVL LIEAFNIQQ+VTPVLPTRCS+KF
Subjt:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPTRCSDKF

TrEMBL top hitse value%identityAlignment
A0A0A0KVY4 Uncharacterized protein7.0e-3083.91Show/hide
Query:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPTRCSDKF
        M+TPPSLLSL I SAI NLS  SDLS LPDHIVL LFLETL+AGKLN+RVLKLFVASGKDEVLSLI  F IQQIVTPVLPTRCS+KF
Subjt:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPTRCSDKF

A0A1S4DX21 probable UDP-arabinopyranose mutase 5 isoform X21.1e-2787.65Show/hide
Query:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPT
        M+TPPSLLSL I SAI NLS  SDLS LPDHIVL LFLETLRAGKLN+RVLKLFVASGKDEVLSLI AFNIQQIVTPVLPT
Subjt:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPT

A0A6J1C7X9 uncharacterized protein LOC1110082432.4e-3082.76Show/hide
Query:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPTRCSDKF
        M+ PPSLLSL I SAI NLS  SDLS LPDHIVL+LFL+TLRAGKLN+RVL+LFVA+G DEVLSLIEAFNIQQIVTPVLPTRCS+KF
Subjt:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPTRCSDKF

A0A6J1EMJ2 probable UDP-arabinopyranose mutase 5 isoform X28.3e-3190.12Show/hide
Query:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPT
        M+TPPSLLSL I SAIHNLSR SDLS LPDH+VLDLFLETLRAGKLN+RVLKLFVA+GKDEVLSLIEAFNIQQIVTPVLPT
Subjt:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPT

A0A6J1J1W3 probable UDP-arabinopyranose mutase 5 isoform X28.3e-3190.12Show/hide
Query:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPT
        M+TPPSLLSL I SAIHNLSR SDLS LPDH+VLDLFLETLRAGKLN+RVLKLFVA+GKDEVLSLIEAFNIQQIVTPVLPT
Subjt:  MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPT

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G30390.1 unknown protein2.7e-2665.12Show/hide
Query:  STPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPTRCSDKF
        S PPSLLSL + +A+ N+SR +DLS LPDHIVLDLF  TL AGKLN+RVL+LF+ASG +EVLS+I+A  I+  V+P+LPTRC +KF
Subjt:  STPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPTRCSDKF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAACCCCTCCATCCCTATTATCTCTCGCCATTCGTTCCGCCATTCACAATCTCTCTCGTTTCTCCGATCTCTCTCTTCTCCCCGATCACATCGTCCTCGACCTTTT
CCTGGAAACTTTAAGGGCTGGAAAATTAAATGATAGGGTTTTGAAGTTGTTTGTGGCTAGTGGAAAAGATGAAGTTCTTTCACTCATTGAGGCGTTCAATATACAACAAA
TTGTCACCCCAGTTCTTCCTACCAGGTGTTCAGATAAGTTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGTCAACCCCTCCATCCCTATTATCTCTCGCCATTCGTTCCGCCATTCACAATCTCTCTCGTTTCTCCGATCTCTCTCTTCTCCCCGATCACATCGTCCTCGACCTTTT
CCTGGAAACTTTAAGGGCTGGAAAATTAAATGATAGGGTTTTGAAGTTGTTTGTGGCTAGTGGAAAAGATGAAGTTCTTTCACTCATTGAGGCGTTCAATATACAACAAA
TTGTCACCCCAGTTCTTCCTACCAGGTGTTCAGATAAGTTCTAG
Protein sequenceShow/hide protein sequence
MSTPPSLLSLAIRSAIHNLSRFSDLSLLPDHIVLDLFLETLRAGKLNDRVLKLFVASGKDEVLSLIEAFNIQQIVTPVLPTRCSDKF