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Sed0020011 (gene) of Chayote v1 genome

Gene IDSed0020011
OrganismSechium edule (Chayote v1)
Descriptionprotein NIM1-INTERACTING 2
Genome locationLG07:36219059..36219976
RNA-Seq ExpressionSed0020011
SyntenySed0020011
Gene Ontology termsGO:0010112 - regulation of systemic acquired resistance (biological process)
InterPro domainsIPR034577 - Protein NIM1-INTERACTING 2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6573971.1 hypothetical protein SDJN03_27858, partial [Cucurbita argyrosperma subsp. sororia]1.2e-3362.66Show/hide
Query:  MPFELFPATRSSERGKRKLV--DDADRDFSAAV-SQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEV
        MPFELFP++R ++RGKRK    + AD D +AA  +QK++ A+ G E E T+DEEVEEFFAILKRLHAATKYIEKIDGA   L+GKR+K  KA E EGD V
Subjt:  MPFELFPATRSSERGKRKLV--DDADRDFSAAV-SQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEV

Query:  EIRAEKSREHK------LDLDLNLEPASVESDGKENRNGRSHDLTPL----AVDSRRK
        EIR ++  E K      LDLDLNLEPASVESDGKE R+ RSH+L  L    A DSRRK
Subjt:  EIRAEKSREHK------LDLDLNLEPASVESDGKENRNGRSHDLTPL----AVDSRRK

KGN52074.1 hypothetical protein Csa_008594 [Cucumis sativus]1.9e-3463.33Show/hide
Query:  MPFELFPATRSSERGKRKLVDDADRDFSAAVSQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEVEIR
        MPFELFPA+RS+ERGKRK  DDA        +QKD  A+ G+EAET TDEEVEEFF+ILKRLHAATKYIEKIDGAS  L+GKR K MK+ E EGDEV I+
Subjt:  MPFELFPATRSSERGKRKLVDDADRDFSAAVSQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEVEIR

Query:  AEKSREHK----LDLDLNLEPASVESDGK-ENRNGRSHDLTPLAVDSRRK
        AE+  E K    LDLDLNLEP  VES+GK   R  R       A DS RK
Subjt:  AEKSREHK----LDLDLNLEPASVESDGK-ENRNGRSHDLTPLAVDSRRK

XP_008446591.1 PREDICTED: protein NIM1-INTERACTING 2 [Cucumis melo]4.2e-3463.7Show/hide
Query:  MPFELFPATRSSERGKRKLVDDADRDFSAAVSQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEVEIR
        MPFELFP +RS++RGKRK  DDA      A +QKD     GKEAET TDEEVEEFF+ILKRLHAATKYIEKIDGAS  L+GKRSK+MK+ E E DEV IR
Subjt:  MPFELFPATRSSERGKRKLVDDADRDFSAAVSQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEVEIR

Query:  AEKSREHK----LDLDLNLEPASVESDGKENRNGRSHDLTPLAVDS
         E+  E K    LDLDLNLEP  VES+GK     +S +L P  VDS
Subjt:  AEKSREHK----LDLDLNLEPASVESDGKENRNGRSHDLTPLAVDS

XP_022944860.1 uncharacterized protein LOC111449260 [Cucurbita moschata]2.7e-3362.03Show/hide
Query:  MPFELFPATRSSERGKRKLV--DDADRDFSAAV-SQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEV
        MPFELFP++R ++RGKRK    + AD D +AA  +QK++ A+ G E + T+DEEVEEFFAILKRLHAATKYIEKIDGA   L+GKR+K  KA E EGD V
Subjt:  MPFELFPATRSSERGKRKLV--DDADRDFSAAV-SQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEV

Query:  EIRAEKSREHK------LDLDLNLEPASVESDGKENRNGRSHDLTPL----AVDSRRK
        EIR ++  E K      LDLDLNLEPASVESDGKE R+ RSH+L  L    A DSRRK
Subjt:  EIRAEKSREHK------LDLDLNLEPASVESDGKENRNGRSHDLTPL----AVDSRRK

XP_038892789.1 protein NIM1-INTERACTING 2 [Benincasa hispida]5.9e-3665.33Show/hide
Query:  MPFELFPATRSSERGKRKLVDDADRDFSAAVSQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEVEIR
        MPFELFPA+RS++RGKRK  DDA        SQ+D+ AD GKEAET TDEEVEEFF+ILKRLHAATKYIEKIDGAS  L+GKRSK  K+ E E DEVEIR
Subjt:  MPFELFPATRSSERGKRKLVDDADRDFSAAVSQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEVEIR

Query:  AEKSREHK----LDLDLNLEPASVESDGKENRN-GRSHDLTPLAVDSRRK
        AEK  +HK    LDLDLNLEPA VESD K +R+          A DS RK
Subjt:  AEKSREHK----LDLDLNLEPASVESDGKENRN-GRSHDLTPLAVDSRRK

TrEMBL top hitse value%identityAlignment
A0A0A0KT67 Uncharacterized protein9.2e-3563.33Show/hide
Query:  MPFELFPATRSSERGKRKLVDDADRDFSAAVSQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEVEIR
        MPFELFPA+RS+ERGKRK  DDA        +QKD  A+ G+EAET TDEEVEEFF+ILKRLHAATKYIEKIDGAS  L+GKR K MK+ E EGDEV I+
Subjt:  MPFELFPATRSSERGKRKLVDDADRDFSAAVSQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEVEIR

Query:  AEKSREHK----LDLDLNLEPASVESDGK-ENRNGRSHDLTPLAVDSRRK
        AE+  E K    LDLDLNLEP  VES+GK   R  R       A DS RK
Subjt:  AEKSREHK----LDLDLNLEPASVESDGK-ENRNGRSHDLTPLAVDSRRK

A0A1S3BFE7 protein NIM1-INTERACTING 22.0e-3463.7Show/hide
Query:  MPFELFPATRSSERGKRKLVDDADRDFSAAVSQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEVEIR
        MPFELFP +RS++RGKRK  DDA      A +QKD     GKEAET TDEEVEEFF+ILKRLHAATKYIEKIDGAS  L+GKRSK+MK+ E E DEV IR
Subjt:  MPFELFPATRSSERGKRKLVDDADRDFSAAVSQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEVEIR

Query:  AEKSREHK----LDLDLNLEPASVESDGKENRNGRSHDLTPLAVDS
         E+  E K    LDLDLNLEP  VES+GK     +S +L P  VDS
Subjt:  AEKSREHK----LDLDLNLEPASVESDGKENRNGRSHDLTPLAVDS

A0A5A7SZN6 Protein NIM1-INTERACTING 22.0e-3463.7Show/hide
Query:  MPFELFPATRSSERGKRKLVDDADRDFSAAVSQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEVEIR
        MPFELFP +RS++RGKRK  DDA      A +QKD     GKEAET TDEEVEEFF+ILKRLHAATKYIEKIDGAS  L+GKRSK+MK+ E E DEV IR
Subjt:  MPFELFPATRSSERGKRKLVDDADRDFSAAVSQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEVEIR

Query:  AEKSREHK----LDLDLNLEPASVESDGKENRNGRSHDLTPLAVDS
         E+  E K    LDLDLNLEP  VES+GK     +S +L P  VDS
Subjt:  AEKSREHK----LDLDLNLEPASVESDGKENRNGRSHDLTPLAVDS

A0A6J1FZ89 uncharacterized protein LOC1114492601.3e-3362.03Show/hide
Query:  MPFELFPATRSSERGKRKLV--DDADRDFSAAV-SQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEV
        MPFELFP++R ++RGKRK    + AD D +AA  +QK++ A+ G E + T+DEEVEEFFAILKRLHAATKYIEKIDGA   L+GKR+K  KA E EGD V
Subjt:  MPFELFPATRSSERGKRKLV--DDADRDFSAAV-SQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEV

Query:  EIRAEKSREHK------LDLDLNLEPASVESDGKENRNGRSHDLTPL----AVDSRRK
        EIR ++  E K      LDLDLNLEPASVESDGKE R+ RSH+L  L    A DSRRK
Subjt:  EIRAEKSREHK------LDLDLNLEPASVESDGKENRNGRSHDLTPL----AVDSRRK

A0A6J1HXL3 uncharacterized protein LOC1114675668.3e-2859.42Show/hide
Query:  MPFELFPATRSSERGKRKLVDDADRDFSAAV----SQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDE
        MPFELFP++R ++RGKRK       D+ AA     +QK + AD GKE E T+DEEVEEFF ILKRLHAATKYIEKIDGA  FL+GKR+K  KA E EGD 
Subjt:  MPFELFPATRSSERGKRKLVDDADRDFSAAV----SQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDE

Query:  VEIRAEKSREHK------LDLDLNLEPASVESDGKENR
        VEIR ++  E K      LDLDLNLEPAS +S     R
Subjt:  VEIRAEKSREHK------LDLDLNLEPASVESDGKENR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCGTTTGAGTTGTTTCCGGCGACTCGGAGTTCGGAAAGAGGCAAAAGAAAGCTGGTAGACGACGCCGATCGCGATTTCTCCGCCGCCGTAAGCCAGAAGGACTCGGC
GGCGGACGGAGGAAAAGAGGCGGAGACGACGACGGATGAAGAGGTGGAAGAGTTCTTCGCCATTTTGAAGCGATTACACGCGGCGACAAAATACATAGAGAAAATCGACG
GTGCGAGCGGTTTCTTGTTGGGAAAAAGATCGAAGAAGATGAAGGCGAGGGAGGTTGAAGGCGATGAAGTTGAAATTAGGGCAGAGAAAAGTAGAGAGCACAAATTGGAT
CTGGATCTGAACTTAGAACCTGCTTCTGTTGAATCGGACGGTAAAGAGAACAGAAACGGCCGGAGCCACGATCTGACGCCGCTGGCCGTCGATTCTCGTCGGAAATAG
mRNA sequenceShow/hide mRNA sequence
CCACACCGAAATTCCGAATTTCGCCGTTCCGTTAAACAATTTTCTTTTTATTTATTTACTTTCTTTCTTTTGAAATAATGTTAATTTCAGGTTATTATAAAGAAAATGGT
GCATCCACACAAAAAGCCTGACCGAAAAGATTCTTTCCCACAGACCACACAAAAACGATGCCGTTTGAGTTGTTTCCGGCGACTCGGAGTTCGGAAAGAGGCAAAAGAAA
GCTGGTAGACGACGCCGATCGCGATTTCTCCGCCGCCGTAAGCCAGAAGGACTCGGCGGCGGACGGAGGAAAAGAGGCGGAGACGACGACGGATGAAGAGGTGGAAGAGT
TCTTCGCCATTTTGAAGCGATTACACGCGGCGACAAAATACATAGAGAAAATCGACGGTGCGAGCGGTTTCTTGTTGGGAAAAAGATCGAAGAAGATGAAGGCGAGGGAG
GTTGAAGGCGATGAAGTTGAAATTAGGGCAGAGAAAAGTAGAGAGCACAAATTGGATCTGGATCTGAACTTAGAACCTGCTTCTGTTGAATCGGACGGTAAAGAGAACAG
AAACGGCCGGAGCCACGATCTGACGCCGCTGGCCGTCGATTCTCGTCGGAAATAGAGATTTCCGGCAGAGCTATGAGATTAGAATTCGACGGCTCCGATCATCCGGGATG
ATGAACTGATATCGGAGCCTTTTGGTTGCGGTTTGGGTATGTCTGACCCAATCCAGAGTTTTCTTACTTATTTTATTTTAATAAATGTATAAGAAATTTTGGCTGTATTA
ATATTAGATATCTGATGTTATTTCAATTATTCGATTATTTGTCAGAAGAATGTGAGGAGGTTTGTTTTTTCAAACCAAGAACATGATTTTCTTGTAAACAATATTAGAAC
CACTTATATTTACTTTATTTATTTATTTTCATTTTTCT
Protein sequenceShow/hide protein sequence
MPFELFPATRSSERGKRKLVDDADRDFSAAVSQKDSAADGGKEAETTTDEEVEEFFAILKRLHAATKYIEKIDGASGFLLGKRSKKMKAREVEGDEVEIRAEKSREHKLD
LDLNLEPASVESDGKENRNGRSHDLTPLAVDSRRK