; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020022 (gene) of Chayote v1 genome

Gene IDSed0020022
OrganismSechium edule (Chayote v1)
DescriptionProlamin_like domain-containing protein
Genome locationLG09:4525248..4525649
RNA-Seq ExpressionSed0020022
SyntenySed0020022
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008502 - Prolamin-like domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046835.1 hypothetical protein E6C27_scaffold216G001330 [Cucumis melo var. makuwa]2.6e-4671.67Show/hide
Query:  ILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFTFWFDFPNLEALKPN
        IL + I L+ L   S   +DYNSPIW+GWVDEDRGYTLRPCLD +R+AKCQVELY YYFNISKKELDLNCCVFVK MGK CA+AFTFW+ FP LE  +PN
Subjt:  ILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFTFWFDFPNLEALKPN

Query:  PMMAYTNCVRRLDAPPPSKF
        PM  Y NC+ RLDAPPP+ F
Subjt:  PMMAYTNCVRRLDAPPPSKF

KAA0046841.1 hypothetical protein E6C27_scaffold216G001410 [Cucumis melo var. makuwa]6.6e-4263.7Show/hide
Query:  MTKKTSTVVTLMGILSWTIILATLAPRSMA--ADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAF
        M   T+TV  ++ IL   + LA L   SMA   DDYNSPIWNGWVDEDR   LRPCLDM+++AKCQV+LY YYFNISKKELDL CCVFVK MGK CA AF
Subjt:  MTKKTSTVVTLMGILSWTIILATLAPRSMA--ADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAF

Query:  TFWFDFPNLEALKPNPMMAYTNCVRRLDAPPPSKF
          W++FP LE  +PNPM+ Y NCV RL A PP+ F
Subjt:  TFWFDFPNLEALKPNPMMAYTNCVRRLDAPPPSKF

KAE8646662.1 hypothetical protein Csa_004797, partial [Cucumis sativus]7.8e-3565.18Show/hide
Query:  KTSTVVTLMGILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFTFWFD
        KT+ +  ++ +LS TI LA L       +DYNS IWN W+DEDR +TLRPCLD +R+AKCQVELY YYFNISK+ELDLNCCVFVK MGK CA+AFTFW+ 
Subjt:  KTSTVVTLMGILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFTFWFD

Query:  FPNLEALKPNPM
        FP LE  +PNPM
Subjt:  FPNLEALKPNPM

KAG6578867.1 hypothetical protein SDJN03_23315, partial [Cucurbita argyrosperma subsp. sororia]2.5e-4169.67Show/hide
Query:  MGILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFTFWFDFPNLEALK
        M IL   I LA LA  S A DDYNSPIW+ WVDEDRG  LRPCLDM+++AKCQVELY YYFNISKKELDLNCCVFVK MGK CA AF  WF FP  E  +
Subjt:  MGILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFTFWFDFPNLEALK

Query:  PNPMMAYTNCVRRLDAPPPSKF
         NPM  Y NCV RLDA PP+ F
Subjt:  PNPMMAYTNCVRRLDAPPPSKF

KGN50979.1 hypothetical protein Csa_008880 [Cucumis sativus]1.7e-3457.81Show/hide
Query:  STVVTLMGILSWTIILATLA--PRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFTFWFD
        ST V L+ ++   +++ +LA    S   D+  S IW+ W+DEDR  TL PCL M+R+ KCQVELY YYFNISKKELDL+CCV+V +MGK CA AF FWF 
Subjt:  STVVTLMGILSWTIILATLA--PRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFTFWFD

Query:  FPNLEALKPNPMMAYTNCVRRLDAPPPS
        FP+LEALKPNPM  Y NC +RL  P P+
Subjt:  FPNLEALKPNPMMAYTNCVRRLDAPPPS

TrEMBL top hitse value%identityAlignment
A0A0A0KEB8 Prolamin_like domain-containing protein1.4e-4264.12Show/hide
Query:  MTKKTSTVVTLMGILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFTF
        M  KT+ +  ++ +LS  I LA L   S   +DYNS IWN W+DEDR +TLRPCLD +R+AKCQVELY YYFNISKKELDLNCCVFVK MGK CA+AFTF
Subjt:  MTKKTSTVVTLMGILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFTF

Query:  WFDFPNLEALKPNPMMAYTNCVRRLDAPPPS
        W+ FP LE  +PNPM  Y NC  RL APPP+
Subjt:  WFDFPNLEALKPNPMMAYTNCVRRLDAPPPS

A0A0A0KQ41 Prolamin_like domain-containing protein8.4e-3557.81Show/hide
Query:  STVVTLMGILSWTIILATLA--PRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFTFWFD
        ST V L+ ++   +++ +LA    S   D+  S IW+ W+DEDR  TL PCL M+R+ KCQVELY YYFNISKKELDL+CCV+V +MGK CA AF FWF 
Subjt:  STVVTLMGILSWTIILATLA--PRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFTFWFD

Query:  FPNLEALKPNPMMAYTNCVRRLDAPPPS
        FP+LEALKPNPM  Y NC +RL  P P+
Subjt:  FPNLEALKPNPMMAYTNCVRRLDAPPPS

A0A0A0L535 Prolamin_like domain-containing protein3.2e-2646.56Show/hide
Query:  TKKTSTVVTLMGILSWTII--LATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFT
        T  ++  + L+ +LS  ++  LA + P S+  D+  S IW+GW+D+DR   L  CL ++++ KCQVELY YYFN SKKE+DL+CCV+V ++G+ CA +F 
Subjt:  TKKTSTVVTLMGILSWTII--LATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFT

Query:  FWFDFPNLEALKPNPMMAYTNCVRRLDAPPP
         WF     +ALKPNPM  Y NC +RL  P P
Subjt:  FWFDFPNLEALKPNPMMAYTNCVRRLDAPPP

A0A5A7TZR1 Prolamin_like domain-containing protein3.2e-4263.7Show/hide
Query:  MTKKTSTVVTLMGILSWTIILATLAPRSMA--ADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAF
        M   T+TV  ++ IL   + LA L   SMA   DDYNSPIWNGWVDEDR   LRPCLDM+++AKCQV+LY YYFNISKKELDL CCVFVK MGK CA AF
Subjt:  MTKKTSTVVTLMGILSWTIILATLAPRSMA--ADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAF

Query:  TFWFDFPNLEALKPNPMMAYTNCVRRLDAPPPSKF
          W++FP LE  +PNPM+ Y NCV RL A PP+ F
Subjt:  TFWFDFPNLEALKPNPMMAYTNCVRRLDAPPPSKF

A0A5D3C280 Prolamin_like domain-containing protein1.3e-4671.67Show/hide
Query:  ILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFTFWFDFPNLEALKPN
        IL + I L+ L   S   +DYNSPIW+GWVDEDRGYTLRPCLD +R+AKCQVELY YYFNISKKELDLNCCVFVK MGK CA+AFTFW+ FP LE  +PN
Subjt:  ILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFTFWFDFPNLEALKPN

Query:  PMMAYTNCVRRLDAPPPSKF
        PM  Y NC+ RLDAPPP+ F
Subjt:  PMMAYTNCVRRLDAPPPSKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAAAGAAAACCAGCACAGTGGTGACATTAATGGGGATTCTCTCATGGACAATAATTTTGGCAACCTTAGCTCCACGCTCGATGGCCGCCGACGATTACAATTCACC
TATATGGAATGGATGGGTAGACGAGGATAGAGGATACACCTTACGACCATGTTTGGATATGATAAGGAATGCAAAATGTCAGGTGGAACTTTACAAGTACTACTTCAATA
TAAGTAAGAAAGAATTGGATCTAAATTGTTGCGTTTTCGTTAAATTCATGGGGAAGAGTTGTGCTGAAGCTTTTACTTTTTGGTTTGACTTTCCAAATTTGGAAGCCTTG
AAACCTAATCCCATGATGGCATATACAAATTGTGTTAGAAGACTTGATGCTCCCCCACCTTCGAAATTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGACAAAGAAAACCAGCACAGTGGTGACATTAATGGGGATTCTCTCATGGACAATAATTTTGGCAACCTTAGCTCCACGCTCGATGGCCGCCGACGATTACAATTCACC
TATATGGAATGGATGGGTAGACGAGGATAGAGGATACACCTTACGACCATGTTTGGATATGATAAGGAATGCAAAATGTCAGGTGGAACTTTACAAGTACTACTTCAATA
TAAGTAAGAAAGAATTGGATCTAAATTGTTGCGTTTTCGTTAAATTCATGGGGAAGAGTTGTGCTGAAGCTTTTACTTTTTGGTTTGACTTTCCAAATTTGGAAGCCTTG
AAACCTAATCCCATGATGGCATATACAAATTGTGTTAGAAGACTTGATGCTCCCCCACCTTCGAAATTTTAA
Protein sequenceShow/hide protein sequence
MTKKTSTVVTLMGILSWTIILATLAPRSMAADDYNSPIWNGWVDEDRGYTLRPCLDMIRNAKCQVELYKYYFNISKKELDLNCCVFVKFMGKSCAEAFTFWFDFPNLEAL
KPNPMMAYTNCVRRLDAPPPSKF