; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020039 (gene) of Chayote v1 genome

Gene IDSed0020039
OrganismSechium edule (Chayote v1)
DescriptionPMD domain-containing protein
Genome locationLG05:26357599..26358282
RNA-Seq ExpressionSed0020039
SyntenySed0020039
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041618.1 hypothetical protein E6C27_scaffold93G00910 [Cucumis melo var. makuwa]4.3e-5754.9Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ Q  +DGLSL+ E+  A   +  W  L N   L  LS E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T+ K+ G++ F D YWEWLE VVGRN ++     L +VV ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE+IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

KAA0047478.1 hypothetical protein E6C27_scaffold498G00950 [Cucumis melo var. makuwa]8.6e-5855.39Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ Q  +DGLSL+ E+P A   +  W  L N   L  LS E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T+ K+ G++ F D YWEWLE VVGRN ++    RL   V ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

KAA0060611.1 hypothetical protein E6C27_scaffold22G004890 [Cucumis melo var. makuwa]3.3e-5754.41Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ QL +DGLSL+ E+P A   +  W  L N   L  L  E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T++K+ G++ F D YWEWLE VVG+N ++     L   V ASLYTYD   DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

TYK02261.1 hypothetical protein E5676_scaffold18G00620 [Cucumis melo var. makuwa]3.3e-5754.41Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ QL +DGLSL+ E+P A   +  W  L N   L  L  E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T++K+ G++ F D YWEWLE VVG+N ++     L   V ASLYTYD   DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

TYK19639.1 hypothetical protein E5676_scaffold242G00260 [Cucumis melo var. makuwa]4.3e-5754.9Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ Q  +DGLSL+ E+  A   +  W  L N   L  LS E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T+ K+ G++ F D YWEWLE VVGRN ++     L +VV ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE+IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

TrEMBL top hitse value%identityAlignment
A0A5A7TFC8 PMD domain-containing protein2.1e-5754.9Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ Q  +DGLSL+ E+  A   +  W  L N   L  LS E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T+ K+ G++ F D YWEWLE VVGRN ++     L +VV ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE+IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

A0A5A7TX42 Uncharacterized protein4.2e-5855.39Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ Q  +DGLSL+ E+P A   +  W  L N   L  LS E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T+ K+ G++ F D YWEWLE VVGRN ++    RL   V ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

A0A5A7V4F4 PMD domain-containing protein1.6e-5754.41Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ QL +DGLSL+ E+P A   +  W  L N   L  L  E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T++K+ G++ F D YWEWLE VVG+N ++     L   V ASLYTYD   DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

A0A5D3BRA8 PMD domain-containing protein1.6e-5754.41Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ QL +DGLSL+ E+P A   +  W  L N   L  L  E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T++K+ G++ F D YWEWLE VVG+N ++     L   V ASLYTYD   DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

A0A5D3D7V4 PMD domain-containing protein2.1e-5754.9Show/hide
Query:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW
        MV+F ER  SG+++LVIL D+ Q  +DGLSL+ E+  A   +  W  L N   L  LS E+P      AWVL+SS+H    N    LTLG+RLIEG+T W
Subjt:  MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHL-NVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHW

Query:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP
         T+ K+ G++ F D YWEWLE VVGRN ++     L +VV ASLYTYD  +DVVRAFCE WCP TNTL T  GE+SISLWDLW   GLPIKG FYEE+IP
Subjt:  NTIMKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIP

Query:  TLQE
        + +E
Subjt:  TLQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G50770.1 Aminotransferase-like, plant mobile domain family protein1.5e-0427.78Show/hide
Query:  WLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIPTLQESMNI
        W   +   +E ++ +  +   V AS Y  +   ++V    E WCP T T     GE +I+L D+  + G  + G     V  TL  S  I
Subjt:  WLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIPTLQESMNI

AT1G50790.1 Plant mobile domain protein family6.2e-0628.74Show/hide
Query:  WLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIPTLQES
        W   +   +E ++ +  +   ++AS Y      D+V    E WCP TNT   + GE +I+L D+  + G  + G     V  TL  S
Subjt:  WLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIPTLQES

AT1G50820.1 Aminotransferase-like, plant mobile domain family protein3.1e-0527.96Show/hide
Query:  NTIMKIHGDWSFID-FYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKG
        +T +K  G W F +  +  W   +   +E ++ +  +   V+AS Y      D+V    E WCP T T     GE +I+L D+  + G  + G
Subjt:  NTIMKIHGDWSFID-FYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKG

AT1G51538.1 Aminotransferase-like, plant mobile domain family protein1.8e-0523.6Show/hide
Query:  MKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKG
        +  +G WS    +  W + +   +E ++ +  +   + AS+Y       ++ A  E WCP T +     GE +I+L D+  + G  ++G
Subjt:  MKIHGDWSFIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKG

AT4G16050.1 Aminotransferase-like, plant mobile domain family protein4.0e-0526.44Show/hide
Query:  WLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIPTLQES
        W++ +V  ++  + ++ +   + AS Y       ++ +  + WCP TNT     GE +I+L D+  + G  I G     V  +LQ S
Subjt:  WLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIPTLQES


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGCATTTTGCTGAACGCGTTACCTCCGGGTTGAAGTATTTGGTGATTTTGAAGGATAAAGAGCAGTTAATTAAGGATGGATTGTCTTTACTTGCTGAAGAGCCCTT
AGCTAGTACTCTTTCCCCTACATGGCAACACCTGAATGTCAAGTTTTTGTCTGAACTATCAAGAGAGTTACCCTTTGAAGGCAATGATAAAGCTTGGGTCTTAAAATCTT
CAATGCATGGTCGAAATTATAATGAAGACCCCGAACTAACATTAGGGCGTCGCTTGATCGAAGGTGAAACTCATTGGAATACCATTATGAAGATTCATGGTGATTGGTCT
TTCATTGATTTTTATTGGGAATGGCTAGAATTTGTCGTTGGTCGTAATGAAAAAGTGTTTAACCAGAATCGCTTACGTAATGTGGTGATGGCTTCTCTCTATACTTATGA
TCATTGTAATGATGTGGTTCGTGCTTTCTGTGAAGGTTGGTGCCCCCGGACGAATACCCTTTTTACCGCAATGGGTGAAGTCTCTATCTCGTTATGGGATTTATGGGATA
TTTGTGGTCTTCCTATCAAAGGAAGATTTTATGAAGAGGTTATTCCGACTCTACAAGAGTCGATGAATATCGAGGTAACTATAAGGTTCTCCCTAAAAGTTGTGAACACC
TATTCCACGCATATTATAAGATAG
mRNA sequenceShow/hide mRNA sequence
ATGGTGCATTTTGCTGAACGCGTTACCTCCGGGTTGAAGTATTTGGTGATTTTGAAGGATAAAGAGCAGTTAATTAAGGATGGATTGTCTTTACTTGCTGAAGAGCCCTT
AGCTAGTACTCTTTCCCCTACATGGCAACACCTGAATGTCAAGTTTTTGTCTGAACTATCAAGAGAGTTACCCTTTGAAGGCAATGATAAAGCTTGGGTCTTAAAATCTT
CAATGCATGGTCGAAATTATAATGAAGACCCCGAACTAACATTAGGGCGTCGCTTGATCGAAGGTGAAACTCATTGGAATACCATTATGAAGATTCATGGTGATTGGTCT
TTCATTGATTTTTATTGGGAATGGCTAGAATTTGTCGTTGGTCGTAATGAAAAAGTGTTTAACCAGAATCGCTTACGTAATGTGGTGATGGCTTCTCTCTATACTTATGA
TCATTGTAATGATGTGGTTCGTGCTTTCTGTGAAGGTTGGTGCCCCCGGACGAATACCCTTTTTACCGCAATGGGTGAAGTCTCTATCTCGTTATGGGATTTATGGGATA
TTTGTGGTCTTCCTATCAAAGGAAGATTTTATGAAGAGGTTATTCCGACTCTACAAGAGTCGATGAATATCGAGGTAACTATAAGGTTCTCCCTAAAAGTTGTGAACACC
TATTCCACGCATATTATAAGATAG
Protein sequenceShow/hide protein sequence
MVHFAERVTSGLKYLVILKDKEQLIKDGLSLLAEEPLASTLSPTWQHLNVKFLSELSRELPFEGNDKAWVLKSSMHGRNYNEDPELTLGRRLIEGETHWNTIMKIHGDWS
FIDFYWEWLEFVVGRNEKVFNQNRLRNVVMASLYTYDHCNDVVRAFCEGWCPRTNTLFTAMGEVSISLWDLWDICGLPIKGRFYEEVIPTLQESMNIEVTIRFSLKVVNT
YSTHIIR