; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020054 (gene) of Chayote v1 genome

Gene IDSed0020054
OrganismSechium edule (Chayote v1)
DescriptionTransmembrane protein 18
Genome locationLG03:14784108..14787604
RNA-Seq ExpressionSed0020054
SyntenySed0020054
Gene Ontology termsGO:0009846 - pollen germination (biological process)
GO:0009860 - pollen tube growth (biological process)
GO:0052543 - callose deposition in cell wall (biological process)
GO:0005640 - nuclear outer membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR026721 - Transmembrane protein 18


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008462809.1 PREDICTED: transmembrane protein 18 [Cucumis melo]3.3e-7587.73Show/hide
Query:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW
        M+ELRSAMEEHM+QM+DL+QKLSSELRSGLRPA+DNF+GFFHAIDWKEPWLMGLLGFHGLLLI+TIFTRKRTNFQMFLFLFALAGVYFAE +N ILSKNW
Subjt:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW

Query:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD
        K F+TQNYFD NGVFLS LW GPLLVISMIILINTL TLCYLVVRWKRAE+RHR R+SQSK+D
Subjt:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD

XP_011650049.1 transmembrane protein 18 [Cucumis sativus]1.2e-7487.12Show/hide
Query:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW
        M+ELRS MEEHM+QM+DL+QKLSSELRSGLRPA+DNF+GFFHAIDWKEPWLMGLLGFHGLLLI+TIFTRKRTNFQMFLFL ALAGVYFAE +N ILSKNW
Subjt:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW

Query:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD
        K+F+TQNYFD NGVFLS LWSGPLLVISMIILINTL TLCYLVVRWKRAE+RHR R+SQSK+D
Subjt:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD

XP_022949841.1 transmembrane protein 18 [Cucurbita moschata]6.6e-7689.57Show/hide
Query:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW
        MEELRSAMEEHM+QMADLVQKLSSELRSGLRPAVDNF+GFFHAIDWKEPWLMGLLGFHGLLLI+TIFTRK TNFQMFLFL ALAGVYFAER+N ILSKNW
Subjt:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW

Query:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD
        K+F+TQNYFD NGVFLSTLWSGPLLVISMIILINTL TLCYLVVRWKRAE+R+R R+SQ+K+D
Subjt:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD

XP_023543279.1 transmembrane protein 18 [Cucurbita pepo subsp. pepo]1.9e-7588.96Show/hide
Query:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW
        MEELRSAMEEHM+QMADLVQKLSSELRSGLRPAVDNF+GFFHAIDWKEPWL+GLLGFHGLLLI+TIFTRK TNFQMFLFL ALAGVYFAER+N ILSKNW
Subjt:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW

Query:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD
        K+F+TQNYFD NGVFLSTLWSGPLL+ISMIILINTL TLCYLVVRWKRAE+R+R R+SQSK+D
Subjt:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD

XP_038900756.1 transmembrane protein 18 [Benincasa hispida]6.6e-7688.34Show/hide
Query:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW
        MEELRSAMEEHM+QMADL+QK+SSELRSG+RPAVDNF+GFFHAIDWKEPWLMGLLGFHGLLLI+TIFTRKRTNFQMFLFL ALAGVYFAER+N ILSKNW
Subjt:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW

Query:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD
        K+F+TQNYFD NGVFLS LWSGPLLVISMIILINTL TLC+LVVRWKRAE+RHR R+SQSK+D
Subjt:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD

TrEMBL top hitse value%identityAlignment
A0A0A0LN62 Transmembrane protein 186.0e-7587.12Show/hide
Query:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW
        M+ELRS MEEHM+QM+DL+QKLSSELRSGLRPA+DNF+GFFHAIDWKEPWLMGLLGFHGLLLI+TIFTRKRTNFQMFLFL ALAGVYFAE +N ILSKNW
Subjt:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW

Query:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD
        K+F+TQNYFD NGVFLS LWSGPLLVISMIILINTL TLCYLVVRWKRAE+RHR R+SQSK+D
Subjt:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD

A0A1S3CHQ8 Transmembrane protein 181.6e-7587.73Show/hide
Query:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW
        M+ELRSAMEEHM+QM+DL+QKLSSELRSGLRPA+DNF+GFFHAIDWKEPWLMGLLGFHGLLLI+TIFTRKRTNFQMFLFLFALAGVYFAE +N ILSKNW
Subjt:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW

Query:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD
        K F+TQNYFD NGVFLS LW GPLLVISMIILINTL TLCYLVVRWKRAE+RHR R+SQSK+D
Subjt:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD

A0A5A7VF36 Transmembrane protein 181.6e-7587.73Show/hide
Query:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW
        M+ELRSAMEEHM+QM+DL+QKLSSELRSGLRPA+DNF+GFFHAIDWKEPWLMGLLGFHGLLLI+TIFTRKRTNFQMFLFLFALAGVYFAE +N ILSKNW
Subjt:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW

Query:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD
        K F+TQNYFD NGVFLS LW GPLLVISMIILINTL TLCYLVVRWKRAE+RHR R+SQSK+D
Subjt:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD

A0A6J1GD63 Transmembrane protein 183.2e-7689.57Show/hide
Query:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW
        MEELRSAMEEHM+QMADLVQKLSSELRSGLRPAVDNF+GFFHAIDWKEPWLMGLLGFHGLLLI+TIFTRK TNFQMFLFL ALAGVYFAER+N ILSKNW
Subjt:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW

Query:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD
        K+F+TQNYFD NGVFLSTLWSGPLLVISMIILINTL TLCYLVVRWKRAE+R+R R+SQ+K+D
Subjt:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD

A0A6J1ISM9 Transmembrane protein 183.2e-7689.57Show/hide
Query:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW
        MEELRSAMEEHM+QMADLVQKLSSELRSGLRPAVDNF+GFFHAIDWKEPWLMGLLGFHGLLLI+TIFTRK TNFQMFLFL ALAGVYFAER+N ILSKNW
Subjt:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW

Query:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD
        K+F+TQNYFD NGVFLSTLWSGPLLVISMIILINTL TLCYLVVRWKRAE+R+R R+SQ+K+D
Subjt:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD

SwissProt top hitse value%identityAlignment
Q3SZ36 Transmembrane protein 186.1e-1644.94Show/hide
Query:  DWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNWKSFSTQNYFDSNGVFLSTLWSGPLLVISMIILI
        DW EPWL+GL GFH L L++T F+ +R   Q+  FL  +  VY AE +N + + NW+ FS   YFDS G+F+S ++S PLL+ +++I++
Subjt:  DWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNWKSFSTQNYFDSNGVFLSTLWSGPLLVISMIILI

Q3TUD9 Transmembrane protein 181.0e-1547.19Show/hide
Query:  DWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNWKSFSTQNYFDSNGVFLSTLWSGPLLVISMIILI
        DW EPWL+GLL FH L L++T F+ +R   Q+  FL  +  VY AE +N + + NW+ FS   YFDS G+F+S ++S PLL  +M+I+I
Subjt:  DWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNWKSFSTQNYFDSNGVFLSTLWSGPLLVISMIILI

Q5F410 Transmembrane protein 185.1e-1537.29Show/hide
Query:  DWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNWKSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVV
        DW EPWL+GL GFH L  ++T F+ +    Q+  FL  +  VY AE +N + + NW+ FS   YFDS G+F+S ++S PLLV ++II++N +     ++ 
Subjt:  DWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNWKSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVV

Query:  RWKRAEIRHRLRVSQSKQ
          K   ++ R++  + K+
Subjt:  RWKRAEIRHRLRVSQSKQ

Q641M3 Transmembrane protein 183.0e-1539.34Show/hide
Query:  FFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNWKSFSTQNYFDSNGVFLSTLWSGPLLVISMIIL-------
        F  ++DW EPWLM LL FH      T+ + K    Q+  FL  +A VY AE LN + + NW+SFS   YFDS G+F+S ++S PLL+ ++II+       
Subjt:  FFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNWKSFSTQNYFDSNGVFLSTLWSGPLLVISMIIL-------

Query:  INTLLTLCYLVVRWKRAEIRHR
         +T+  L  L ++ K A   H+
Subjt:  INTLLTLCYLVVRWKRAEIRHR

Q6DGF8 Transmembrane protein 182.3e-1537.82Show/hide
Query:  DWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNWKSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVV
        DW EPWL+GLL FH L L++T F+ +R   Q+  FL  +  VY AE +N + + NW+ F+   YFDS G+F+S ++S PLL  +M+I+I  +     ++ 
Subjt:  DWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNWKSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVV

Query:  RWKRAEIRHRLRVSQSKQD
          K  + R + R  + K++
Subjt:  RWKRAEIRHRLRVSQSKQD

Arabidopsis top hitse value%identityAlignment
AT1G34350.1 unknown protein7.8e-6773.62Show/hide
Query:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW
        MEE+RSAME+ ++ +ADLV+KLS ELR+G +PA DNFLGFFHAIDWKEPW+MGL+ FH LLL+VT+ +R+  NF MFLFL ALAGVYFAE LN  L KNW
Subjt:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNW

Query:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD
        KSFSTQNYFDSNGVFLSTLWSGPLLVI+MIILINTL +LCYL+V+WKRAE+RHR R++ +K++
Subjt:  KSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD

AT1G34350.2 unknown protein2.6e-6263.3Show/hide
Query:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFA------------------
        MEE+RSAME+ ++ +ADLV+KLS ELR+G +PA DNFLGFFHAIDWKEPW+MGL+ FH LLL+VT+ +R+  NF MFLFL A                  
Subjt:  MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFA------------------

Query:  -------LAGVYFAERLNSILSKNWKSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD
               +AGVYFAE LN  L KNWKSFSTQNYFDSNGVFLSTLWSGPLLVI+MIILINTL +LCYL+V+WKRAE+RHR R++ +K++
Subjt:  -------LAGVYFAERLNSILSKNWKSFSTQNYFDSNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGTTGAGATCTGCAATGGAGGAACATATGAACCAAATGGCGGATCTGGTTCAGAAACTTTCCTCGGAACTCCGATCCGGTCTCCGTCCTGCTGTTGATAATTT
CCTCGGTTTCTTCCACGCCATTGACTGGAAGGAACCTTGGTTGATGGGGTTATTGGGTTTTCATGGATTGTTGCTGATTGTAACTATTTTTACCAGGAAGCGTACCAACT
TTCAGATGTTCTTGTTCCTTTTCGCACTGGCTGGTGTATATTTTGCTGAAAGACTTAATAGCATCTTGAGCAAAAACTGGAAAAGTTTTTCCACCCAGAACTACTTTGAT
TCAAATGGAGTTTTCTTATCAACGCTCTGGTCCGGCCCGCTACTCGTAATTTCAATGATAATCCTGATAAACACACTCTTGACATTATGCTATCTAGTAGTAAGGTGGAA
AAGAGCTGAGATTCGGCATCGCTTGAGGGTTTCACAGAGTAAACAAGATTAA
mRNA sequenceShow/hide mRNA sequence
GGGACGGGGAAGTCCTGTTCTGCCTCGTGGACATCTCTAGCCATGTTTAACTAGTGGAATTTTCCAAGGGGTTTAAGAGCAAAACGGTGTCGTTTGAAGCAGTGATTTCA
GATCCAAGCTCGAGGTTATGGGTTGAACAAGAACCGAAGATCTGGAAGACGAATTTACAGAGCTCACAGCTGAGAGAGAATCGCAATAAATTCCATAATCATCAAAGTAC
GTTTTCAGATCTTCAATTTGAGTTACAGTAATGGAGGAGTTGAGATCTGCAATGGAGGAACATATGAACCAAATGGCGGATCTGGTTCAGAAACTTTCCTCGGAACTCCG
ATCCGGTCTCCGTCCTGCTGTTGATAATTTCCTCGGTTTCTTCCACGCCATTGACTGGAAGGAACCTTGGTTGATGGGGTTATTGGGTTTTCATGGATTGTTGCTGATTG
TAACTATTTTTACCAGGAAGCGTACCAACTTTCAGATGTTCTTGTTCCTTTTCGCACTGGCTGGTGTATATTTTGCTGAAAGACTTAATAGCATCTTGAGCAAAAACTGG
AAAAGTTTTTCCACCCAGAACTACTTTGATTCAAATGGAGTTTTCTTATCAACGCTCTGGTCCGGCCCGCTACTCGTAATTTCAATGATAATCCTGATAAACACACTCTT
GACATTATGCTATCTAGTAGTAAGGTGGAAAAGAGCTGAGATTCGGCATCGCTTGAGGGTTTCACAGAGTAAACAAGATTAACCCCAAAAACCGAAGTATGTTTAGCTTT
GATGATGTCTTTTTTGCTGGTAGCTTGTATCTTTATCTTATCCTTCACACAGATCGTTGGACTGATACAAGTACAATGCAAATTGCAAGGAGCGGATTTGTTTTCTCCTT
TTGTCTTTAATATAGGCTTCATAGATACTGTAGTAATCAACAGATACAACATATAGCTTGAATTTCGGTGTGTAATCATCAGTCATTATTGATTTCATTTACTTGTCTTG
GACAGTAATAATAGGACTAAAATCGTTATATTTTTTCGATTAAAAGGTTCAAGGTCTATACATGGGGATAACATCTTTTCTTGAAGCTTGTGAAAATGTAGATGGGATGC
TGAATATATTGATGATATAAGACAGATTCCAA
Protein sequenceShow/hide protein sequence
MEELRSAMEEHMNQMADLVQKLSSELRSGLRPAVDNFLGFFHAIDWKEPWLMGLLGFHGLLLIVTIFTRKRTNFQMFLFLFALAGVYFAERLNSILSKNWKSFSTQNYFD
SNGVFLSTLWSGPLLVISMIILINTLLTLCYLVVRWKRAEIRHRLRVSQSKQD