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Sed0020057 (gene) of Chayote v1 genome

Gene IDSed0020057
OrganismSechium edule (Chayote v1)
DescriptionE3 ubiquitin-protein ligase RNF181-like
Genome locationLG14:2054441..2054950
RNA-Seq ExpressionSed0020057
SyntenySed0020057
Gene Ontology termsGO:0044267 - cellular protein metabolic process (biological process)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571005.1 E3 ubiquitin-protein ligase RING1-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.4e-1533.33Show/hide
Query:  PIDDDLRELELRLSSIRVENLHLSLQLENMRLSSIQVENLHLSLQLEDINQLISRMSHLTRYLEQVHAD-------FGLVRGNTTSATERSRMSPTPATM
        P+  + R ++     I + ++ LSL +  +    I  +    +LQL + +       H+   ++ V            +V+G + +   R  +    A  
Subjt:  PIDDDLRELELRLSSIRVENLHLSLQLENMRLSSIQVENLHLSLQLEDINQLISRMSHLTRYLEQVHAD-------FGLVRGNTTSATERSRMSPTPATM

Query:  ERFRMEKL--EENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE
         R+RMEK+  EE EE++DL +C+ICLDE+ C+  E +R  CGHVYH+ CI  WL+NS+SCP+CRT  PL E
Subjt:  ERFRMEKL--EENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE

XP_016899530.1 PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Cucumis melo]3.9e-1559.09Show/hide
Query:  RMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE
        R E+L+  E+ +DL  C+ICLDE+ C+  E +RI CGHVYH+ CI  WL N NSCP+CR PLPLKE
Subjt:  RMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE

XP_022944063.1 RING-H2 finger protein ATL16-like [Cucurbita moschata]1.0e-1533.53Show/hide
Query:  PIDDDLRELELRLSSIRVENLHLSLQLENMRLSSIQVENLHLSLQLEDINQLISRMSHLTRYLEQVHAD-------FGLVRGNTTSATERSRMSPTPATM
        P+  + R ++     I + ++ LSL +  +    I  +    +LQL + +       H+   ++ V            +V+G + +   R  +    A  
Subjt:  PIDDDLRELELRLSSIRVENLHLSLQLENMRLSSIQVENLHLSLQLEDINQLISRMSHLTRYLEQVHAD-------FGLVRGNTTSATERSRMSPTPATM

Query:  ERFRMEKLE-ENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE
         R+RMEK+E E EE++DL +C+ICLDE+ C+  E +R  CGHVYH+ CI  WL+NS+SCP+CRT  PL E
Subjt:  ERFRMEKLE-ENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE

XP_022985641.1 RING-H2 finger protein ATL16-like [Cucurbita maxima]1.1e-1432.94Show/hide
Query:  PIDDDLRELELRLSSIRVENLHLSLQLENMRLSSIQVENLHLSLQLEDINQLISRMSHLTRYLEQVHAD-------FGLVRGNTTSATERSRMSPTPATM
        P+  + R ++     I +  + LSL +  +    I  +    +LQL + +       H+   ++ V            +++G   +   R  +    A  
Subjt:  PIDDDLRELELRLSSIRVENLHLSLQLENMRLSSIQVENLHLSLQLEDINQLISRMSHLTRYLEQVHAD-------FGLVRGNTTSATERSRMSPTPATM

Query:  ERFRMEKLEENEEQQ-DLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE
         R+RMEK+EE EE++ DL +C+ICLDE+ C+  E +R  CGHVYH+ CI  WL+NS+SCP+CRT  PL E
Subjt:  ERFRMEKLEENEEQQ-DLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE

XP_023512244.1 RING-H2 finger protein ATL16-like [Cucurbita pepo subsp. pepo]1.4e-1532.54Show/hide
Query:  PIDDDLRELELRLSSIRVENLHLSLQLENMRLSSIQVENLHLSLQLEDINQLISRMSHLTRYLEQVHAD-------FGLVRGNTTSATERSRMSPTPATM
        P+  + R ++     I + ++ LSL +  +    I  +    +LQL + +       H+   ++ V            + +G + +   R  +    A  
Subjt:  PIDDDLRELELRLSSIRVENLHLSLQLENMRLSSIQVENLHLSLQLEDINQLISRMSHLTRYLEQVHAD-------FGLVRGNTTSATERSRMSPTPATM

Query:  ERFRMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE
         R+RMEK+E  EE++DL +C+ICLDE+ C+  E +R  CGHVYH+ CI  WL+NS+SCP+CRT  PL E
Subjt:  ERFRMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE

TrEMBL top hitse value%identityAlignment
A0A1S4DUZ4 E3 ubiquitin-protein ligase RNF181-like1.9e-1559.09Show/hide
Query:  RMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE
        R E+L+  E+ +DL  C+ICLDE+ C+  E +RI CGHVYH+ CI  WL N NSCP+CR PLPLKE
Subjt:  RMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE

A0A5A7TLM1 E3 ubiquitin-protein ligase RNF181-like protein1.4e-1357.81Show/hide
Query:  RMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPL
        R+ KL+  EE+ D   C++CLDE+DC   E +RI CGHVYH+ CI  WLNN+NSCP+CRT  PL
Subjt:  RMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPL

A0A5D3E1S5 E3 ubiquitin-protein ligase RNF181-like protein1.9e-1559.09Show/hide
Query:  RMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE
        R E+L+  E+ +DL  C+ICLDE+ C+  E +RI CGHVYH+ CI  WL N NSCP+CR PLPLKE
Subjt:  RMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE

A0A6J1FXN0 RING-H2 finger protein ATL16-like5.0e-1633.53Show/hide
Query:  PIDDDLRELELRLSSIRVENLHLSLQLENMRLSSIQVENLHLSLQLEDINQLISRMSHLTRYLEQVHAD-------FGLVRGNTTSATERSRMSPTPATM
        P+  + R ++     I + ++ LSL +  +    I  +    +LQL + +       H+   ++ V            +V+G + +   R  +    A  
Subjt:  PIDDDLRELELRLSSIRVENLHLSLQLENMRLSSIQVENLHLSLQLEDINQLISRMSHLTRYLEQVHAD-------FGLVRGNTTSATERSRMSPTPATM

Query:  ERFRMEKLE-ENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE
         R+RMEK+E E EE++DL +C+ICLDE+ C+  E +R  CGHVYH+ CI  WL+NS+SCP+CRT  PL E
Subjt:  ERFRMEKLE-ENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE

A0A6J1J8T7 RING-H2 finger protein ATL16-like5.5e-1532.94Show/hide
Query:  PIDDDLRELELRLSSIRVENLHLSLQLENMRLSSIQVENLHLSLQLEDINQLISRMSHLTRYLEQVHAD-------FGLVRGNTTSATERSRMSPTPATM
        P+  + R ++     I +  + LSL +  +    I  +    +LQL + +       H+   ++ V            +++G   +   R  +    A  
Subjt:  PIDDDLRELELRLSSIRVENLHLSLQLENMRLSSIQVENLHLSLQLEDINQLISRMSHLTRYLEQVHAD-------FGLVRGNTTSATERSRMSPTPATM

Query:  ERFRMEKLEENEEQQ-DLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE
         R+RMEK+EE EE++ DL +C+ICLDE+ C+  E +R  CGHVYH+ CI  WL+NS+SCP+CRT  PL E
Subjt:  ERFRMEKLEENEEQQ-DLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE

SwissProt top hitse value%identityAlignment
O22197 Probable E3 ubiquitin-protein ligase RHC1A1.6e-0629.09Show/hide
Query:  GLVRGNT----------------TSATERSRMSPTP-ATMERFRMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPM
        G+ RGNT                ++ T R    P P + ++     K+ +   +    +C +C DE +    E  ++ C H+YH  CI+ WL   NSCP+
Subjt:  GLVRGNT----------------TSATERSRMSPTP-ATMERFRMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPM

Query:  CRTPLPLKEG
        CR  LP   G
Subjt:  CRTPLPLKEG

P0CH30 E3 ubiquitin-protein ligase RING12.0e-0631.88Show/hide
Query:  ATMERFRMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLP
        + +E   +  + ++    +   C +C+D+ + +  E  ++ C H+YHK C+L WL   NSCP+CR  LP
Subjt:  ATMERFRMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLP

Q6AVN2 E3 ubiquitin-protein ligase SIRP14.5e-0638.18Show/hide
Query:  QDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE
        +++ SC++CLD+++    +  ++ C H +H  CIL WL   +SCP+CR  LP +E
Subjt:  QDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKE

Q94AK4 E3 ubiquitin-protein ligase RZF12.0e-0631.82Show/hide
Query:  TSATERSRMSPTP-ATMERFRMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKEGS
        +S T      P P ++++     K+ +   +     C +C DE + K  E  ++ C H+YH  CI+ WL   NSCP+CR  LP +  S
Subjt:  TSATERSRMSPTP-ATMERFRMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKEGS

Q9CY62 E3 ubiquitin-protein ligase RNF1811.6e-0642.11Show/hide
Query:  DLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKEGSH
        DLK C +CL E + +    + + C H++H  CIL WL+ +NSCP+CR  LP  + S+
Subjt:  DLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKEGSH

Arabidopsis top hitse value%identityAlignment
AT1G60360.1 RING/U-box superfamily protein3.4e-0936.14Show/hide
Query:  TERSRMSPTPA---TMERFRMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPL
        T+  R  P PA   T+      K+       D+  CT+C++E      +   + C H+YHK CI+ WL  +NSCP+CR  LPL
Subjt:  TERSRMSPTPA---TMERFRMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPL

AT2G40830.2 RING-H2 finger C1A1.1e-0729.09Show/hide
Query:  GLVRGNT----------------TSATERSRMSPTP-ATMERFRMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPM
        G+ RGNT                ++ T R    P P + ++     K+ +   +    +C +C DE +    E  ++ C H+YH  CI+ WL   NSCP+
Subjt:  GLVRGNT----------------TSATERSRMSPTP-ATMERFRMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPM

Query:  CRTPLPLKEG
        CR  LP   G
Subjt:  CRTPLPLKEG

AT3G30460.1 RING/U-box superfamily protein5.0e-0833.64Show/hide
Query:  LEDINQLISRMSHLTRYLEQVHADFGLVRGNTTSATERSRMSPTPATMERFRMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWL
        L  ++ L SR +H           FGLV GN++S T           +E F  E++ E    + L  C IC +E+         + C H YHK CI  WL
Subjt:  LEDINQLISRMSHLTRYLEQVHADFGLVRGNTTSATERSRMSPTPATMERFRMEKLEENEEQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWL

Query:  NNSNSCPMCR
        +N N+CP+CR
Subjt:  NNSNSCPMCR

AT4G12210.1 RING/U-box superfamily protein4.5e-0934.52Show/hide
Query:  TTSATERSRMSPTPATMERFRMEKLEENEEQQDLKSCTICLDEI--DCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPL
        T S T  ++ S     + R + E+L+    + + +SC+ICL+ +    K  +  R+ C HV+H PC+L W    N+CP+CRT L
Subjt:  TTSATERSRMSPTPATMERFRMEKLEENEEQQDLKSCTICLDEI--DCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPL

AT5G43200.1 Zinc finger, C3HC4 type (RING finger) family protein6.5e-0840.74Show/hide
Query:  EQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWL-NNSNSCPMCRTPL
        E+++ K+C ICL+E+      C    C H +H+PC+  WL   +NSCP+CR P+
Subjt:  EQQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWL-NNSNSCPMCRTPL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCTTCTTCTCCGATTGACGACGACCTTCGAGAACTCGAACTGCGCTTAAGTTCAATTCGAGTCGAGAACTTGCACCTTAGCCTTCAACTTGAGAACATGCGCTTAAG
TTCAATCCAAGTCGAGAACTTGCACCTTAGCCTTCAACTTGAGGACATTAACCAACTCATCTCCAGGATGTCACACCTCACCAGGTACCTTGAGCAAGTGCACGCGGACT
TCGGGTTGGTTCGGGGAAACACTACATCGGCAACCGAGAGGTCTCGAATGAGCCCTACGCCGGCAACGATGGAGAGGTTTCGAATGGAGAAATTGGAAGAGAATGAAGAA
CAACAAGATTTGAAAAGTTGCACTATATGTTTGGATGAAATAGATTGCAAAATGTGTGAGTGTGTAAGGATCGTCTGCGGACATGTGTATCATAAACCATGTATCCTCGC
CTGGCTTAACAATTCCAATTCTTGTCCCATGTGTAGAACCCCACTGCCCTTAAAGGAGGGCTCCCACTGA
mRNA sequenceShow/hide mRNA sequence
ATGTCTTCTTCTCCGATTGACGACGACCTTCGAGAACTCGAACTGCGCTTAAGTTCAATTCGAGTCGAGAACTTGCACCTTAGCCTTCAACTTGAGAACATGCGCTTAAG
TTCAATCCAAGTCGAGAACTTGCACCTTAGCCTTCAACTTGAGGACATTAACCAACTCATCTCCAGGATGTCACACCTCACCAGGTACCTTGAGCAAGTGCACGCGGACT
TCGGGTTGGTTCGGGGAAACACTACATCGGCAACCGAGAGGTCTCGAATGAGCCCTACGCCGGCAACGATGGAGAGGTTTCGAATGGAGAAATTGGAAGAGAATGAAGAA
CAACAAGATTTGAAAAGTTGCACTATATGTTTGGATGAAATAGATTGCAAAATGTGTGAGTGTGTAAGGATCGTCTGCGGACATGTGTATCATAAACCATGTATCCTCGC
CTGGCTTAACAATTCCAATTCTTGTCCCATGTGTAGAACCCCACTGCCCTTAAAGGAGGGCTCCCACTGA
Protein sequenceShow/hide protein sequence
MSSSPIDDDLRELELRLSSIRVENLHLSLQLENMRLSSIQVENLHLSLQLEDINQLISRMSHLTRYLEQVHADFGLVRGNTTSATERSRMSPTPATMERFRMEKLEENEE
QQDLKSCTICLDEIDCKMCECVRIVCGHVYHKPCILAWLNNSNSCPMCRTPLPLKEGSH