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Sed0020064 (gene) of Chayote v1 genome

Gene IDSed0020064
OrganismSechium edule (Chayote v1)
DescriptionCytochrome c-type biogenesis protein
Genome locationLG07:11247664..11248084
RNA-Seq ExpressionSed0020064
SyntenySed0020064
Gene Ontology termsGO:0009793 - embryo development ending in seed dormancy (biological process)
GO:0005743 - mitochondrial inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0032991 - protein-containing complex (cellular component)
GO:0016491 - oxidoreductase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR005616 - CcmH/CycL/Ccl2/NrfF family


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004149299.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis sativus]2.9e-3274.75Show/hide
Query:  VISLQLIRDEIRSGKT--DIHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLLA
        ++  +LIRDEIRSGK+  DI+KKLEN++GE++LYTPKFDLQTA LWLS   V+VAGAA GVWAY+KHKQ+SN+HIMALNLVRGVPL PKE QTMLDLL+
Subjt:  VISLQLIRDEIRSGKT--DIHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLLA

XP_008452301.1 PREDICTED: cytochrome c-type biogenesis CcmH-like mitochondrial protein [Cucumis melo]5.9e-3376.77Show/hide
Query:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLLA
        ++  +LIRDEIRSGKTD  I+KKLEN++GE++LYTPKFDLQTA LWLS   VLVAGAA GVWAY+KHKQ+SN+HIMALNLVRGVPL PKE QTMLDLL+
Subjt:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLLA

XP_022152937.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Momordica charantia]7.7e-3377.55Show/hide
Query:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLL
        ++  +LIRDEIRSGK+D  I++KLE+++GE++LYTPKFDLQTAALWLS   VLVAGAAAGVWAYNKHKQK+N+HIMALNLVRGVPL PKE QTMLDLL
Subjt:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLL

XP_022992426.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein isoform X2 [Cucurbita maxima]3.8e-3276.47Show/hide
Query:  YFVISLQ-LIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDL
        Y +IS + LIRDEIRSGK+D  I KKLEN++GE++LYTPKFDLQTAALWLS   VLVAGAAAGVWAY+K+KQKSN+HIMALN+VRGVPL P+E QTMLDL
Subjt:  YFVISLQ-LIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDL

Query:  LA
        L+
Subjt:  LA

XP_038904619.1 cytochrome c-type biogenesis CcmH-like mitochondrial protein [Benincasa hispida]9.1e-3478.79Show/hide
Query:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLLA
        ++  +LIRDEIRSGKTD  I+KKLEN++GE++LYTPKFDLQTAALWLS   VLVAGAAAGVWAY+KHKQ+SN+HIMALNLVRGVPL PKE QTMLDLL+
Subjt:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLLA

TrEMBL top hitse value%identityAlignment
A0A0A0L351 Cytochrome c-type biogenesis protein1.4e-3274.75Show/hide
Query:  VISLQLIRDEIRSGKT--DIHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLLA
        ++  +LIRDEIRSGK+  DI+KKLEN++GE++LYTPKFDLQTA LWLS   V+VAGAA GVWAY+KHKQ+SN+HIMALNLVRGVPL PKE QTMLDLL+
Subjt:  VISLQLIRDEIRSGKT--DIHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLLA

A0A1S4DZT6 Cytochrome c-type biogenesis protein2.9e-3376.77Show/hide
Query:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLLA
        ++  +LIRDEIRSGKTD  I+KKLEN++GE++LYTPKFDLQTA LWLS   VLVAGAA GVWAY+KHKQ+SN+HIMALNLVRGVPL PKE QTMLDLL+
Subjt:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLLA

A0A5A7TY95 Cytochrome c-type biogenesis protein2.9e-3376.77Show/hide
Query:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLLA
        ++  +LIRDEIRSGKTD  I+KKLEN++GE++LYTPKFDLQTA LWLS   VLVAGAA GVWAY+KHKQ+SN+HIMALNLVRGVPL PKE QTMLDLL+
Subjt:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLLA

A0A6J1DHL6 Cytochrome c-type biogenesis protein3.7e-3377.55Show/hide
Query:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLL
        ++  +LIRDEIRSGK+D  I++KLE+++GE++LYTPKFDLQTAALWLS   VLVAGAAAGVWAYNKHKQK+N+HIMALNLVRGVPL PKE QTMLDLL
Subjt:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLL

A0A6J1JTI4 Cytochrome c-type biogenesis protein1.8e-3275.76Show/hide
Query:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLLA
        ++  +LIRDEIRSGK+D  I KKLEN++GE++LYTPKFDLQTAALWLS   VLVAGAAAGVWAY+K+KQKSN+HIMALN+VRGVPL P+E QTMLDLL+
Subjt:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLLA

SwissProt top hitse value%identityAlignment
B8AFK5 Cytochrome c-type biogenesis CcmH-like mitochondrial protein2.6e-3166.33Show/hide
Query:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLL
        ++  +LIRDEI+SGK+D  I+KKL+ ++GE++LYTPKFDLQTAA+WLS   V+V G AAGVWAY KH+Q++N+HIMALNLVRGVPL P+E +TMLD+L
Subjt:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLL

Q6K7S7 Cytochrome c-type biogenesis CcmH-like mitochondrial protein2.6e-3166.33Show/hide
Query:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLL
        ++  +LIRDEI+SGK+D  I+KKL+ ++GE++LYTPKFDLQTAA+WLS   V+V G AAGVWAY KH+Q++N+HIMALNLVRGVPL P+E +TMLD+L
Subjt:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLL

Q9XI46 Cytochrome c-type biogenesis CcmH-like mitochondrial protein8.9e-2458.16Show/hide
Query:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLL
        ++  QLIR+EI +GKTD  I+ KLE+E GE++LY PKFDLQTAALWL+   V++AG  A    Y KH+ + N+ IMALNL+RGVPL PKE  T+LD+L
Subjt:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLL

Arabidopsis top hitse value%identityAlignment
AT1G15220.1 cytochrome c biogenesis protein family6.3e-2558.16Show/hide
Query:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLL
        ++  QLIR+EI +GKTD  I+ KLE+E GE++LY PKFDLQTAALWL+   V++AG  A    Y KH+ + N+ IMALNL+RGVPL PKE  T+LD+L
Subjt:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLL

AT1G15220.2 cytochrome c biogenesis protein family6.3e-2558.16Show/hide
Query:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLL
        ++  QLIR+EI +GKTD  I+ KLE+E GE++LY PKFDLQTAALWL+   V++AG  A    Y KH+ + N+ IMALNL+RGVPL PKE  T+LD+L
Subjt:  VISLQLIRDEIRSGKTD--IHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACTTGCTTGATATTGGGTTGTATTTTGTAATATCACTGCAGTTGATTCGCGATGAGATTCGGTCGGGGAAAACAGACATCCATAAAAAGCTTGAGAATGAACATGG
AGAGTCACTCCTATACACCCCAAAGTTTGACCTTCAAACTGCAGCATTATGGCTATCACAGGATTATGTGTTAGTGGCTGGTGCTGCTGCAGGAGTATGGGCTTATAATA
AGCACAAACAAAAATCTAACATTCACATCATGGCTTTAAATCTAGTCAGGGGTGTTCCATTGATCCCTAAAGAGAACCAAACCATGTTAGATCTGCTAGCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACTTGCTTGATATTGGGTTGTATTTTGTAATATCACTGCAGTTGATTCGCGATGAGATTCGGTCGGGGAAAACAGACATCCATAAAAAGCTTGAGAATGAACATGG
AGAGTCACTCCTATACACCCCAAAGTTTGACCTTCAAACTGCAGCATTATGGCTATCACAGGATTATGTGTTAGTGGCTGGTGCTGCTGCAGGAGTATGGGCTTATAATA
AGCACAAACAAAAATCTAACATTCACATCATGGCTTTAAATCTAGTCAGGGGTGTTCCATTGATCCCTAAAGAGAACCAAACCATGTTAGATCTGCTAGCTTGA
Protein sequenceShow/hide protein sequence
MNLLDIGLYFVISLQLIRDEIRSGKTDIHKKLENEHGESLLYTPKFDLQTAALWLSQDYVLVAGAAAGVWAYNKHKQKSNIHIMALNLVRGVPLIPKENQTMLDLLA