; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020077 (gene) of Chayote v1 genome

Gene IDSed0020077
OrganismSechium edule (Chayote v1)
DescriptionYrdC-like domain-containing protein
Genome locationLG01:7604624..7608197
RNA-Seq ExpressionSed0020077
SyntenySed0020077
Gene Ontology termsGO:0006351 - transcription, DNA-templated (biological process)
GO:0006450 - regulation of translational fidelity (biological process)
GO:0005666 - RNA polymerase III complex (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0000049 - tRNA binding (molecular function)
GO:0003677 - DNA binding (molecular function)
GO:0003725 - double-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR006070 - YrdC-like domain
IPR017945 - DHBP synthase RibB-like alpha/beta domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6607198.1 YrdC domain-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]1.2e-13790.18Show/hide
Query:  LLQTTMNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDT
        +L TTMNT+PAKM+E LS+IRTFATFPSS LGAP++G VS LH NRGSRLNFPKTVWSLEKCSMR EN LQA+ PASEAFAQEA +ALKAGKVIAVPTDT
Subjt:  LLQTTMNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDT

Query:  LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR
        LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDV DITRFAV DHLP GLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR
Subjt:  LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR

Query:  SEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAAS
        S  ALALTSANLSGQPSSV V+DFENLWQHCA VYDGGVLPAGRAGSTIIDLTKRGT+KIIRAGSAKEQTVATLERYSLLEEA S
Subjt:  SEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAAS

XP_022948702.1 yrdC domain-containing protein, mitochondrial [Cucurbita moschata]1.4e-13890.18Show/hide
Query:  LLQTTMNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDT
        +L TTMNT+PAKM+E LS+IRTFATFPSS LGAP++G VS LH NRGSRLNFPKTVWSLEKCSMR EN LQA+ PASEAFAQEA +ALKAGKVIAVPTDT
Subjt:  LLQTTMNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDT

Query:  LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR
        LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDV DITRFAV DHLP GLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR
Subjt:  LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR

Query:  SEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAAS
        S  ALALTSANLSGQPSSVCV DFENLWQHCA VYDGG+LPAGRAGSTIIDLTKRGT+KIIRAGSAKEQTVATLERYSLLEEA S
Subjt:  SEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAAS

XP_022998259.1 yrdC domain-containing protein, mitochondrial [Cucurbita maxima]1.4e-13890.53Show/hide
Query:  LLQTTMNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDT
        +L TTMNT PAKM+E LSLIRTFATFPSS LGAPN+G VS LH NRGSRLNFPKT WSLEKCSMR EN LQA+ PASEAFAQEAT+ALKAGKVIAVPTDT
Subjt:  LLQTTMNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDT

Query:  LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR
        LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDV DITRFAV DHLP GLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR
Subjt:  LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR

Query:  SEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAAS
        S  ALALTSANLSG+PSSVCV+DFENLWQHCA VYDGGVLPAGRAGSTIIDLTKRG +KIIRAGSAKEQTVATLERYSLLEEA S
Subjt:  SEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAAS

XP_023521571.1 yrdC domain-containing protein, mitochondrial-like [Cucurbita pepo subsp. pepo]1.3e-13990.88Show/hide
Query:  LLQTTMNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDT
        +L TTMNT+PAKM+E LSLIRTFATFPSS LGAPN+G VS LH NRGSRLNFPKTVWSLEKCSMR EN LQA+ PASEAFAQEAT+ALKAGKVIAVPTDT
Subjt:  LLQTTMNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDT

Query:  LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR
        LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDV DITRFAV DHLP GLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR
Subjt:  LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR

Query:  SEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAAS
        S  ALALTSANLSGQPSSVCV+DFENLWQHCA VYDGGVLPAGRAGSTIIDLTKRGT+KIIRAGSAKEQTVATL+RYSLLE+A S
Subjt:  SEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAAS

XP_038893581.1 yrdC domain-containing protein, mitochondrial isoform X1 [Benincasa hispida]7.7e-13789.68Show/hide
Query:  MNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MN +PAKM+E LSLIRTF TFPSSHLG+PN+GLVS L  NRGSR++FPKT WSLEKC MR EN LQA+ PASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSEMAL
        CDACSSEAV+RIYEIKGRKLTSPLAICVGDV DITRFAVTDHLP GLLDSLLPGPVTVVLKRGE+SILEKSLNPGL+SIGVRVPDADFIRLISRRSE AL
Subjt:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSEMAL

Query:  ALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAASI
        ALTSANLSGQPSSVCV+DFENLWQHCA VYDGGVLPAGRAGSTIIDLT+RGTYKI+RAGSAKEQTVA LERYSLLEEAASI
Subjt:  ALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAASI

TrEMBL top hitse value%identityAlignment
A0A0A0LUP4 YrdC-like domain-containing protein1.8e-13186.12Show/hide
Query:  MNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MNT+PAKM + LSLIRTF TFPSS LG+ N+G+VS L  NRGSR++F KT WSLEKC MR EN LQA+ PASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSEMAL
        CDACS+EAV+RIYEIKGRKLTSPLAICVGDV DITRFAVTDHLP GLLDSLLPGPVTVVLKRGESS+L+KSLNPGL+SIGVRVPDADFIRLISRRSE AL
Subjt:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSEMAL

Query:  ALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAASI
        ALTSANLSGQPSSVCV+DFENLWQHCA VYDGGVLPAGRAGSTIIDLT++GT+KIIRAGSA+EQT+ATLERYSLLE AA+I
Subjt:  ALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAASI

A0A1S3CNI2 yrdC domain-containing protein, mitochondrial2.6e-13084.7Show/hide
Query:  MNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MNT+PAKM + LSLIRTFATFPSSHLG+ N+G+VS L  NRGSR++F KT WSLEKC M  EN LQA+ PASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSEMAL
        CDACS+EAV+RIYEIKGRKLTSPLAICVG V DITR+A+TDHLP GLLDSLLPGPVTVVLKRGESS+L+KSLNPGL+SIGVRVPDADFIRLISRRSE AL
Subjt:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSEMAL

Query:  ALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAASI
        ALTSANLSGQPSSVCV+DFENLWQHCA VYDGGVLPAGRAGSTI+DLT+RGT+KIIRAGSA++QT+ATL+RYSLLE AA+I
Subjt:  ALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAASI

A0A5A7T5W1 YrdC domain-containing protein2.6e-13084.7Show/hide
Query:  MNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDTLYGLA
        MNT+PAKM + LSLIRTFATFPSSHLG+ N+G+VS L  NRGSR++F KT WSLEKC M  EN LQA+ PASEAFAQEATDALKAGKVIAVPTDTLYGLA
Subjt:  MNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDTLYGLA

Query:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSEMAL
        CDACS+EAV+RIYEIKGRKLTSPLAICVG V DITR+A+TDHLP GLLDSLLPGPVTVVLKRGESS+L+KSLNPGL+SIGVRVPDADFIRLISRRSE AL
Subjt:  CDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSEMAL

Query:  ALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAASI
        ALTSANLSGQPSSVCV+DFENLWQHCA VYDGGVLPAGRAGSTI+DLT+RGT+KIIRAGSA++QT+ATL+RYSLLE AA+I
Subjt:  ALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAASI

A0A6J1G9Z7 yrdC domain-containing protein, mitochondrial6.8e-13990.18Show/hide
Query:  LLQTTMNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDT
        +L TTMNT+PAKM+E LS+IRTFATFPSS LGAP++G VS LH NRGSRLNFPKTVWSLEKCSMR EN LQA+ PASEAFAQEA +ALKAGKVIAVPTDT
Subjt:  LLQTTMNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDT

Query:  LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR
        LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDV DITRFAV DHLP GLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR
Subjt:  LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR

Query:  SEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAAS
        S  ALALTSANLSGQPSSVCV DFENLWQHCA VYDGG+LPAGRAGSTIIDLTKRGT+KIIRAGSAKEQTVATLERYSLLEEA S
Subjt:  SEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAAS

A0A6J1KDV4 yrdC domain-containing protein, mitochondrial6.8e-13990.53Show/hide
Query:  LLQTTMNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDT
        +L TTMNT PAKM+E LSLIRTFATFPSS LGAPN+G VS LH NRGSRLNFPKT WSLEKCSMR EN LQA+ PASEAFAQEAT+ALKAGKVIAVPTDT
Subjt:  LLQTTMNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDT

Query:  LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR
        LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDV DITRFAV DHLP GLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR
Subjt:  LYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRR

Query:  SEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAAS
        S  ALALTSANLSG+PSSVCV+DFENLWQHCA VYDGGVLPAGRAGSTIIDLTKRG +KIIRAGSAKEQTVATLERYSLLEEA S
Subjt:  SEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAAS

SwissProt top hitse value%identityAlignment
Q0VC80 YrdC domain-containing protein, mitochondrial1.4e-4547.83Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES
        A   L+AG V+AVPTDTLYGLAC A  SEA+  +Y +KGR  T PLA+C+G V D+ R+     +P GLL  LLPGPVT+V++R E   L K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES

Query:  IGVRVPDADFIRLISRRSEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVL-----PAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYS
        +G+R+PD  F++ +++     LALTSANLS Q SS+ V++F++LW H + + DGG +     P  R GST++DL+  G + IIR G A E T A L+ Y 
Subjt:  IGVRVPDADFIRLISRRSEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVL-----PAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYS

Query:  LLEEAAS
        LL    S
Subjt:  LLEEAAS

Q3U5F4 YrdC domain-containing protein, mitochondrial1.5e-4246.15Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES
        A   L+AG V+AVPTDTLYGLAC A SS A++ +Y +KGR    PLA+C+G V D+ R+     +P  LL+ L PGPVT+V++R E   L K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES

Query:  IGVRVPDADFIRLISRRSEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVL-----PAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATL-ERY
        +G+R+PD  F+  +++     LALTSANLS Q SS+ V++F++LW H + V DGG +     P  R GST++DL+  G + IIR G A E T + L ++Y
Subjt:  IGVRVPDADFIRLISRRSEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVL-----PAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATL-ERY

Query:  SLLEEAAS
         LL    S
Subjt:  SLLEEAAS

Q499R4 YrdC domain-containing protein, mitochondrial1.9e-4246.15Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES
        A   L+AG V+AVPTDTLYGLAC A  S A++ +Y +KGR    PLA+C+G V D+ R+     +P  LL+ L PGPVT+V++R E   L K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES

Query:  IGVRVPDADFIRLISRRSEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVL-----PAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLE-RY
        +G+R+PD  F+  +++     LALTSANLS Q SS+ V++F++LW H + V DGG +     P  R GST++DL+  G + IIR+G A E T A L+ +Y
Subjt:  IGVRVPDADFIRLISRRSEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVL-----PAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLE-RY

Query:  SLLEEAAS
         LL    S
Subjt:  SLLEEAAS

Q60369 Putative threonylcarbamoyl-AMP synthase5.0e-2235.71Show/hide
Query:  MRFENRLQAIYPASEAFAQEATDALKA----GKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPG
        M  +N++  IY  +E   ++  + LK     GK++   TDTLYG++ +A + +AV ++Y IK R+   PL+ICV D  +I ++A  + L   ++D  LPG
Subjt:  MRFENRLQAIYPASEAFAQEATDALKA----GKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPG

Query:  PVTVVLKR--GESSILEKSLNPGLESIGVRVPDADFIRLISRRSEMALALTSANLSGQPSSVCVDDFE
        P+T++LK+  G   I+ K      + IG+R+PD   IR +   S + L  TSAN+SG+ S   VD+ +
Subjt:  PVTVVLKR--GESSILEKSLNPGLESIGVRVPDADFIRLISRRSEMALALTSANLSGQPSSVCVDDFE

Q86U90 YrdC domain-containing protein, mitochondrial1.8e-4347.6Show/hide
Query:  ATDALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES
        A   L+AG V+AVPTDTLYGLAC A  S A+  +Y +KGR    PLA+C+G V D+ R+     +P GLL  LLPGPVT+V++R E   L K LNP    
Subjt:  ATDALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLES

Query:  IGVRVPDADFIRLISRRSEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVL-----PAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATL-ERY
        +G+R+PD  F++ +++  E  LALTSANLS Q SS+ V++F++LW   + V DGG +     P  R GST++DL+  G + IIR G A E T A L ++Y
Subjt:  IGVRVPDADFIRLISRRSEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVL-----PAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATL-ERY

Query:  SLLEEAAS
         LL   AS
Subjt:  SLLEEAAS

Arabidopsis top hitse value%identityAlignment
AT3G01920.1 DHBP synthase RibB-like alpha/beta domain2.6e-1029.95Show/hide
Query:  QEATDALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPG----------LLDSLLPGPVTVVLKRGESS
        Q   D LK G V  +PTDT+Y +ACD  +  AV R+  IK  + + PL+I    + DI  F  T   P G           +   LPGP T +L      
Subjt:  QEATDALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPG----------LLDSLLPGPVTVVLKRGESS

Query:  ILEKSLNPGLES--------IGVRVPDADFIRLISRRSEMALALTSANLSGQPSSVCVDDFENLW-----QHCACVYDGGVLPAGRAGSTIIDLTKRGTY
        + ++ +  G  S        +GVR+ D    + I ++ +  L  TS  + G   +  + D   +      +    V DGG+  A    STI+D+T  G Y
Subjt:  ILEKSLNPGLES--------IGVRVPDADFIRLISRRSEMALALTSANLSGQPSSVCVDDFENLW-----QHCACVYDGGVLPAGRAGSTIIDLTKRGTY

Query:  -KIIRAG
         K+IR G
Subjt:  -KIIRAG

AT5G60590.1 DHBP synthase RibB-like alpha/beta domain1.4e-4066.67Show/hide
Query:  NRGSRLNF---PKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITR
        N+  RL +    K VWSLE+      ++   ++PA+EA+AQEA +A+K+ KVIAVPTDTLYG ACDACS EAV+RIYEIKGRKLTSPLAICVGDV DI R
Subjt:  NRGSRLNF---PKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITR

Query:  FAVTDHLPPGLLDSLLPGPVTVVLKR
         A T HLP GLLDSLLPGPVT+VL+R
Subjt:  FAVTDHLPPGLLDSLLPGPVTVVLKR

AT5G60590.2 DHBP synthase RibB-like alpha/beta domain4.7e-9271.37Show/hide
Query:  NRGSRLNF---PKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITR
        N+  RL +    K VWSLE+      ++   ++PA+EA+AQEA +A+K+ KVIAVPTDTLYG ACDACS EAV+RIYEIKGRKLTSPLAICVGDV DI R
Subjt:  NRGSRLNF---PKTVWSLEKCSMRFENRLQAIYPASEAFAQEATDALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITR

Query:  FAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLP
         A T HLP GLLDSLLPGPVT+VL+RGESSILEKSLNPG+ +IGVRVPD +FIR +SR S   LALTSANLSG  SSVCV DFENLWQHCA VYDGG+LP
Subjt:  FAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVRVPDADFIRLISRRSEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLP

Query:  AGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEE
        +GRAGSTI+DLTK G YKIIR GSAK+ TVA LE+Y L EE
Subjt:  AGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTCCGAACAATTGGGAATTCAAATTTGAACAGTTATTGCTTCCCCTGTTTTCTGTAAACCCCAAATTAGGGTTTAAGCTCACAACGGCTGCCGCTTTGTTACAGAC
CACGATGAACACGATTCCGGCGAAAATGCTCGAGCCTCTCTCTCTAATCCGCACGTTTGCAACTTTTCCATCTTCTCACTTAGGTGCTCCCAATCATGGGTTAGTTTCTT
CCCTGCATCCAAATAGAGGATCCAGGTTGAATTTTCCTAAAACGGTGTGGAGTTTGGAGAAGTGTAGTATGCGCTTTGAGAACCGTTTGCAGGCGATTTATCCTGCCTCT
GAAGCTTTTGCCCAAGAGGCTACTGATGCTCTTAAAGCCGGGAAGGTTATCGCGGTCCCGACTGATACTCTTTATGGGCTCGCTTGTGATGCTTGTTCTTCTGAAGCAGT
CAATAGGATTTACGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGATGTCCCTGACATAACTCGTTTTGCTGTTACAGACCATTTGCCTCCTG
GTTTGCTTGATTCTCTCCTTCCAGGACCGGTGACTGTTGTTCTAAAAAGAGGCGAGTCTAGTATTCTTGAGAAGTCTCTGAACCCTGGATTGGAGAGTATAGGAGTCCGT
GTACCTGATGCTGACTTCATTCGGCTCATTTCCCGTAGATCAGAGATGGCATTGGCTCTTACAAGTGCTAATTTAAGTGGACAACCAAGCAGCGTATGTGTTGATGATTT
TGAAAACCTATGGCAACACTGTGCTTGTGTGTATGATGGTGGTGTTCTTCCTGCTGGACGAGCAGGTTCTACCATTATCGACCTCACCAAGCGAGGGACATATAAGATCA
TCAGAGCTGGAAGTGCAAAGGAGCAGACCGTTGCAACACTTGAAAGGTACTCACTGTTAGAAGAAGCTGCTAGTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATTAGTCTGTGTCATGCCCTAATTATGCCTCCGAACAATTGGGAATTCAAATTTGAACAGTTATTGCTTCCCCTGTTTTCTGTAAACCCCAAATTAGGGTTTAAGCTCAC
AACGGCTGCCGCTTTGTTACAGACCACGATGAACACGATTCCGGCGAAAATGCTCGAGCCTCTCTCTCTAATCCGCACGTTTGCAACTTTTCCATCTTCTCACTTAGGTG
CTCCCAATCATGGGTTAGTTTCTTCCCTGCATCCAAATAGAGGATCCAGGTTGAATTTTCCTAAAACGGTGTGGAGTTTGGAGAAGTGTAGTATGCGCTTTGAGAACCGT
TTGCAGGCGATTTATCCTGCCTCTGAAGCTTTTGCCCAAGAGGCTACTGATGCTCTTAAAGCCGGGAAGGTTATCGCGGTCCCGACTGATACTCTTTATGGGCTCGCTTG
TGATGCTTGTTCTTCTGAAGCAGTCAATAGGATTTACGAAATTAAAGGACGTAAACTTACAAGCCCTCTCGCCATTTGTGTTGGTGATGTCCCTGACATAACTCGTTTTG
CTGTTACAGACCATTTGCCTCCTGGTTTGCTTGATTCTCTCCTTCCAGGACCGGTGACTGTTGTTCTAAAAAGAGGCGAGTCTAGTATTCTTGAGAAGTCTCTGAACCCT
GGATTGGAGAGTATAGGAGTCCGTGTACCTGATGCTGACTTCATTCGGCTCATTTCCCGTAGATCAGAGATGGCATTGGCTCTTACAAGTGCTAATTTAAGTGGACAACC
AAGCAGCGTATGTGTTGATGATTTTGAAAACCTATGGCAACACTGTGCTTGTGTGTATGATGGTGGTGTTCTTCCTGCTGGACGAGCAGGTTCTACCATTATCGACCTCA
CCAAGCGAGGGACATATAAGATCATCAGAGCTGGAAGTGCAAAGGAGCAGACCGTTGCAACACTTGAAAGGTACTCACTGTTAGAAGAAGCTGCTAGTATTTGAGCATTA
GATATTGTCATGTGCTCAAACATCTATACACGTACGCCCTACAAAGAACATTTTTAGGCCGAGTAAAGTAGATTAATTCTTATGGGTGTAACATTTCATTTTTAATCATT
ATATTGCCCTCTGTTTCTAAAATTCTTGGTTTTATTTGTATGATTATGTAGCCTTTGGATTATTTGTCAAATTTTACCATACTGTATTATGAGGACCTCACTAACA
Protein sequenceShow/hide protein sequence
MPPNNWEFKFEQLLLPLFSVNPKLGFKLTTAAALLQTTMNTIPAKMLEPLSLIRTFATFPSSHLGAPNHGLVSSLHPNRGSRLNFPKTVWSLEKCSMRFENRLQAIYPAS
EAFAQEATDALKAGKVIAVPTDTLYGLACDACSSEAVNRIYEIKGRKLTSPLAICVGDVPDITRFAVTDHLPPGLLDSLLPGPVTVVLKRGESSILEKSLNPGLESIGVR
VPDADFIRLISRRSEMALALTSANLSGQPSSVCVDDFENLWQHCACVYDGGVLPAGRAGSTIIDLTKRGTYKIIRAGSAKEQTVATLERYSLLEEAASI