; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020080 (gene) of Chayote v1 genome

Gene IDSed0020080
OrganismSechium edule (Chayote v1)
DescriptionSquamosa promoter-binding-like protein
Genome locationLG10:1754932..1757005
RNA-Seq ExpressionSed0020080
SyntenySed0020080
Gene Ontology termsGO:0006355 - regulation of transcription, DNA-templated (biological process)
GO:0009908 - flower development (biological process)
GO:0005634 - nucleus (cellular component)
GO:0003677 - DNA binding (molecular function)
GO:0003700 - DNA-binding transcription factor activity (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR004333 - SBP domain
IPR036893 - SBP domain superfamily
IPR044817 - Squamosa promoter-binding-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7026565.1 Squamosa promoter-binding protein 1, partial [Cucurbita argyrosperma subsp. argyrosperma]2.3e-4572.92Show/hide
Query:  MANSIDQVWRDVVEEVE-----DEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQR
        M +S DQ W + VEE E     D+DDD EI +V+DE+KKRA  S  R GSGGGRTS V RCQAD CN DL+ A+AYHRRHKVCEFH+KAAVVILAGLEQR
Subjt:  MANSIDQVWRDVVEEVE-----DEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQR

Query:  FCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS
        FCQQCSRFHSV+EFD+TKRSCR RLAGHNERRRK+L +FQG SS
Subjt:  FCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS

XP_022926740.1 squamosa promoter-binding-like protein 3 [Cucurbita moschata]3.1e-4572.92Show/hide
Query:  MANSIDQVWRDVVEEVEDE-----DDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQR
        M +S DQ W + VEE E+E     DDD EI +V+DE+KKRA  S  R GSGGGRTS V RCQAD CN DL+ A+AYHRRHKVCEFH+KAAVVILAGLEQR
Subjt:  MANSIDQVWRDVVEEVEDE-----DDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQR

Query:  FCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS
        FCQQCSRFHSV+EFD+TKRSCR RLAGHNERRRK+L +FQG SS
Subjt:  FCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS

XP_023004048.1 squamosa promoter-binding-like protein 3 [Cucurbita maxima]1.3e-4877.46Show/hide
Query:  MANSIDQVWRDVV---EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFC
        M NS DQ W D V   EE E+EDDD E+ +VEDE+KKRAV SS R GSGGGRTS VARCQAD CN DL+ A+AYHRRHKVCEFH+KAAVVILAGLEQRFC
Subjt:  MANSIDQVWRDVV---EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFC

Query:  QQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS
        QQCSRFHSV+EFD+TKRSCR RLAGHNERRRK+L +FQG SS
Subjt:  QQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS

XP_023518277.1 squamosa promoter-binding-like protein 3 [Cucurbita pepo subsp. pepo]1.8e-4575.18Show/hide
Query:  MANSIDQVWRDVV--EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQ
        M +S DQ W D V  EE EDEDDD EI +V+DE+KKRAV S  R G GGGRTS VARCQAD CN DL+ A+AYHRRHKVCEFH+KAAVVILAGLEQRFCQ
Subjt:  MANSIDQVWRDVV--EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQ

Query:  QCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS
        Q  RFHSV+EFD+TKRSCR RLAGHNERRRK+L +FQG SS
Subjt:  QCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS

XP_038880830.1 squamosa promoter-binding protein 1-like [Benincasa hispida]6.6e-4875.71Show/hide
Query:  MANSIDQVWRD-VVEEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        M NS DQVW D VVEE +D DD+ EI +VEDE+++R+  + GR GSGGGR  TVARCQAD CNADLS A+ YHRRHKVCEFHAKAAVVILAGLEQRFCQQ
Subjt:  MANSIDQVWRD-VVEEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS
        CSRFH+V+EFDDTKRSCR RLAGHNERRRK L +F G SS
Subjt:  CSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS

TrEMBL top hitse value%identityAlignment
A0A0A0KK74 SBP-type domain-containing protein7.4e-4570Show/hide
Query:  MANSIDQVWRD-VVEEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ
        MANS DQ W D +V++ +D++D+ EI +V++E+++R+  +S R G GGGR STVARCQAD CNADL+ AK YHRRHKVCEFH++AAVVILAGLEQRFCQQ
Subjt:  MANSIDQVWRD-VVEEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQ

Query:  CSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS
        CSRFH+++EFDDTKRSCRMRLAGHNERRRK L +F G SS
Subjt:  CSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS

A0A1S3AZN8 squamosa promoter-binding protein 13.7e-4468.79Show/hide
Query:  MANSIDQVWRDVVEEVEDEDDD--AEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQ
        MANS D  W D++ + +D+DD+   E+ +V++E+++R+  ++GR G GGGR STVARCQAD CNADL+ A+ YHRRHKVCEFHAKAAVVILAGLEQRFCQ
Subjt:  MANSIDQVWRDVVEEVEDEDDD--AEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQ

Query:  QCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS
        QCSRFH+V+EFDDTKRSCR RLAGHNERRRK L +F G SS
Subjt:  QCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS

A0A6J1CK81 squamosa promoter-binding protein 17.9e-3973.08Show/hide
Query:  DVVEEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFD
        D  EE ED     E+ + E+E+K R   S GRCG G GR STVARCQAD CNADLS A+ YHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFH+V+EFD
Subjt:  DVVEEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFD

Query:  DTKRSCRMRLAGHNERRRKSL-TEFQGHSS
        +TKRSCR RLAGHNERRRKSL +EF G  S
Subjt:  DTKRSCRMRLAGHNERRRKSL-TEFQGHSS

A0A6J1EFR3 Squamosa promoter-binding-like protein1.5e-4572.92Show/hide
Query:  MANSIDQVWRDVVEEVEDE-----DDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQR
        M +S DQ W + VEE E+E     DDD EI +V+DE+KKRA  S  R GSGGGRTS V RCQAD CN DL+ A+AYHRRHKVCEFH+KAAVVILAGLEQR
Subjt:  MANSIDQVWRDVVEEVEDE-----DDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQR

Query:  FCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS
        FCQQCSRFHSV+EFD+TKRSCR RLAGHNERRRK+L +FQG SS
Subjt:  FCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS

A0A6J1KYC6 Squamosa promoter-binding-like protein6.4e-4977.46Show/hide
Query:  MANSIDQVWRDVV---EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFC
        M NS DQ W D V   EE E+EDDD E+ +VEDE+KKRAV SS R GSGGGRTS VARCQAD CN DL+ A+AYHRRHKVCEFH+KAAVVILAGLEQRFC
Subjt:  MANSIDQVWRDVV---EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFC

Query:  QQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS
        QQCSRFHSV+EFD+TKRSCR RLAGHNERRRK+L +FQG SS
Subjt:  QQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS

SwissProt top hitse value%identityAlignment
A2YFT9 Squamosa promoter-binding-like protein 108.7e-2769.88Show/hide
Query:  GGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRK
        GG      RCQA+ C ADLS AK YHRRHKVCE+HAKA+VV  +G +QRFCQQCSRFH +TEFD+ KRSCR RLA HN RRRK
Subjt:  GGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRK

P93015 Squamosa promoter-binding-like protein 31.4e-2957.5Show/hide
Query:  EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTK
        EE EDED   E E +E ++K +A  SSG              CQ + C AD+S AK YH+RHKVC+FHAKA  V ++GL QRFCQQCSRFH+++EFD+ K
Subjt:  EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTK

Query:  RSCRMRLAGHNERRRKSLTE
        RSCR RLAGHNERRRKS T+
Subjt:  RSCRMRLAGHNERRRKSLTE

Q38741 Squamosa promoter-binding protein 12.9e-3061.54Show/hide
Query:  EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTK
        E+ E+EDD       ED KK RA+  SG+  SG    ST   CQ + C A++++AK YHRRHKVCEFHAKA VV+ +GL+QRFCQQCSRFH ++EFD+ K
Subjt:  EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTK

Query:  RSCRMRLAGHNERRRKS
        RSCR RLAGHNERRRKS
Subjt:  RSCRMRLAGHNERRRKS

Q8GXL3 Squamosa promoter-binding-like protein 81.3e-2769.41Show/hide
Query:  SGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRK
        SG   + +  RCQA+ CNADLS AK YHRRHKVCEFH+KA+ V+ AGL QRFCQQCSRFH ++EFD+ KRSCR RLA HN RRRK
Subjt:  SGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRK

Q9S7A9 Squamosa promoter-binding-like protein 42.7e-2856.9Show/hide
Query:  DEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCR
        +ED + + +  E+  + R  GS G    GG    ++  CQ D C AD+  AK YHRRHKVCE HAKA+ V L+GL QRFCQQCSRFH + EFD+ KRSCR
Subjt:  DEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCR

Query:  MRLAGHNERRRKSLTE
         RLAGHNERRRKS  E
Subjt:  MRLAGHNERRRKSLTE

Arabidopsis top hitse value%identityAlignment
AT1G02065.1 squamosa promoter binding protein-like 89.5e-2969.41Show/hide
Query:  SGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRK
        SG   + +  RCQA+ CNADLS AK YHRRHKVCEFH+KA+ V+ AGL QRFCQQCSRFH ++EFD+ KRSCR RLA HN RRRK
Subjt:  SGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRK

AT1G53160.1 squamosa promoter binding protein-like 41.9e-2956.9Show/hide
Query:  DEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCR
        +ED + + +  E+  + R  GS G    GG    ++  CQ D C AD+  AK YHRRHKVCE HAKA+ V L+GL QRFCQQCSRFH + EFD+ KRSCR
Subjt:  DEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCR

Query:  MRLAGHNERRRKSLTE
         RLAGHNERRRKS  E
Subjt:  MRLAGHNERRRKSLTE

AT1G53160.2 squamosa promoter binding protein-like 41.9e-2956.9Show/hide
Query:  DEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCR
        +ED + + +  E+  + R  GS G    GG    ++  CQ D C AD+  AK YHRRHKVCE HAKA+ V L+GL QRFCQQCSRFH + EFD+ KRSCR
Subjt:  DEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCR

Query:  MRLAGHNERRRKSLTE
         RLAGHNERRRKS  E
Subjt:  MRLAGHNERRRKSLTE

AT2G33810.1 squamosa promoter binding protein-like 31.0e-3057.5Show/hide
Query:  EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTK
        EE EDED   E E +E ++K +A  SSG              CQ + C AD+S AK YH+RHKVC+FHAKA  V ++GL QRFCQQCSRFH+++EFD+ K
Subjt:  EEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTK

Query:  RSCRMRLAGHNERRRKSLTE
        RSCR RLAGHNERRRKS T+
Subjt:  RSCRMRLAGHNERRRKSLTE

AT3G60030.1 squamosa promoter-binding protein-like 126.8e-2759.57Show/hide
Query:  GGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS
        GGG  S    CQ D C ADLS  K YHRRHKVCE H+KA   ++ G+ QRFCQQCSRFH + EFD+ KRSCR RLAGHN+RRRK+  +  G+ +
Subjt:  GGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFDDTKRSCRMRLAGHNERRRKSLTEFQGHSS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGAACTCCATAGATCAAGTTTGGAGGGACGTGGTCGAAGAAGTGGAAGACGAAGATGATGATGCCGAAATAGAGTATGTAGAGGATGAGAAGAAGAAAAGAGCTGT
AGGTAGTAGTGGTCGATGTGGAAGCGGAGGAGGAAGGACGTCGACCGTGGCGCGTTGCCAAGCCGATTGCTGCAATGCCGATCTGAGCAGCGCCAAGGCGTACCACCGCC
GCCACAAGGTATGCGAGTTTCATGCCAAGGCGGCCGTGGTGATTTTGGCTGGATTGGAACAGCGCTTCTGCCAGCAGTGTAGTAGGTTTCATTCAGTAACGGAGTTCGAT
GACACAAAACGAAGCTGCCGAATGCGTTTGGCCGGACACAATGAACGGCGGCGAAAAAGCTTAACGGAGTTTCAGGGACATTCTTCCCTTGACCAATAA
mRNA sequenceShow/hide mRNA sequence
GGTTCTTCTCATAGGCTTCTCTGCAAAAATGGCGAACTCCATAGATCAAGTTTGGAGGGACGTGGTCGAAGAAGTGGAAGACGAAGATGATGATGCCGAAATAGAGTATG
TAGAGGATGAGAAGAAGAAAAGAGCTGTAGGTAGTAGTGGTCGATGTGGAAGCGGAGGAGGAAGGACGTCGACCGTGGCGCGTTGCCAAGCCGATTGCTGCAATGCCGAT
CTGAGCAGCGCCAAGGCGTACCACCGCCGCCACAAGGTATGCGAGTTTCATGCCAAGGCGGCCGTGGTGATTTTGGCTGGATTGGAACAGCGCTTCTGCCAGCAGTGTAG
TAGGTTTCATTCAGTAACGGAGTTCGATGACACAAAACGAAGCTGCCGAATGCGTTTGGCCGGACACAATGAACGGCGGCGAAAAAGCTTAACGGAGTTTCAGGGACATT
CTTCCCTTGACCAATAA
Protein sequenceShow/hide protein sequence
MANSIDQVWRDVVEEVEDEDDDAEIEYVEDEKKKRAVGSSGRCGSGGGRTSTVARCQADCCNADLSSAKAYHRRHKVCEFHAKAAVVILAGLEQRFCQQCSRFHSVTEFD
DTKRSCRMRLAGHNERRRKSLTEFQGHSSLDQ