; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020092 (gene) of Chayote v1 genome

Gene IDSed0020092
OrganismSechium edule (Chayote v1)
DescriptionVARLMGL domain-containing protein
Genome locationLG12:34264551..34265275
RNA-Seq ExpressionSed0020092
SyntenySed0020092
Gene Ontology termsNA
InterPro domainsIPR032795 - DUF3741-associated sequence motif


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057827.1 hypothetical protein E6C27_scaffold274G001140 [Cucumis melo var. makuwa]3.0e-7362.03Show/hide
Query:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA
        MKELS F+FKN LAAKMR   RTFCNGDGSTSTL QHKT QD FPISPDL CRQ P TLE MILQLEL EETAR+ K+YNYDEMRGR+SCVNNSDILRSA
Subjt:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA

Query:  WNALTQYPQFSLDGKDVMYRSYFRNLD-AEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAK
         NAL QYP+FSLDGKD MYRS FRNLD AE+ GRKS               FNLTLETALRLPS IAG++VVW KPGVVAKLMGLEA+P  +NA+  KA 
Subjt:  WNALTQYPQFSLDGKDVMYRSYFRNLD-AEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAK

Query:  LTSKLKRQT------------------------------------------PIATESATWKARRFL
        L S LKRQ+                                          PIATESA W+AR FL
Subjt:  LTSKLKRQT------------------------------------------PIATESATWKARRFL

XP_022135499.1 uncharacterized protein LOC111007440 [Momordica charantia]1.1e-7564.15Show/hide
Query:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA
        MKELS F+FKN LAAKMR  IRTFCNGDGSTSTL QHK  QDHFPISPD+ CR+NP TLE MILQLEL EETAR+ K+YNYDEMRGR+SCVNNSDILRSA
Subjt:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA

Query:  WNALTQYPQFSLDGKDVMYRSYFRNLDAEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAKL
         NAL QYP+FSLDGKD MYRS FRNLDA  AGRKS               FNLTLETALRLPS IAG+SVVW KPGVVAKLMGLEA+P  VNAK GKAKL
Subjt:  WNALTQYPQFSLDGKDVMYRSYFRNLDAEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAKL

Query:  TSKLKRQT------------------------------------------PIATESATWKARRFL
        +S LKR                                            PIATESA WKAR+FL
Subjt:  TSKLKRQT------------------------------------------PIATESATWKARRFL

XP_023007284.1 uncharacterized protein LOC111499822 [Cucurbita maxima]9.5e-7261.42Show/hide
Query:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA
        MKELS F+FKN LAAKMR   RTFCNGDGSTSTL QHKT QD FP SP++ C QN  TLE MILQLEL EETAR+ K+ NYDEMRGR+SCVNNSDILRSA
Subjt:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA

Query:  WNALTQYPQFSLDGKDVMYRSYFRNLDAEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAKL
         NAL QYP+FSLDGKD MYRS FR+  AEK GRKS               FNLTLETALRLPS IAG+SVVW KPGVVAKLMGLEAMPT VNA+CG AKL
Subjt:  WNALTQYPQFSLDGKDVMYRSYFRNLDAEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAKL

Query:  TSKLKRQT--------------------------------------------PIATESATWKARRFL
        +S LK+Q+                                            PIATESA WKAR FL
Subjt:  TSKLKRQT--------------------------------------------PIATESATWKARRFL

XP_031736616.1 uncharacterized protein LOC116402050 [Cucumis sativus]2.3e-7362.41Show/hide
Query:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA
        MKELS F+FKN LAAKMR   RTFCNGDGSTSTL Q KT QD FPISPDL CRQ P TLE MILQLEL EETAR+ K+YNYDEMRGR+SCVNNSDILRSA
Subjt:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA

Query:  WNALTQYPQFSLDGKDVMYRSYFRNLD-AEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAK
         NAL QYP+FSLDGKD MYRS FRNLD AE+ GRKS               FNLTLETALRLPS IAG++VVW KPGVVAKLMGLEAMP  +NA+  KA 
Subjt:  WNALTQYPQFSLDGKDVMYRSYFRNLD-AEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAK

Query:  LTSKLKRQT------------------------------------------PIATESATWKARRFL
        LTS LKRQ+                                          PIATESA W+AR FL
Subjt:  LTSKLKRQT------------------------------------------PIATESATWKARRFL

XP_038878557.1 uncharacterized protein LOC120070753 [Benincasa hispida]6.0e-7463.16Show/hide
Query:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA
        MKELS F+FKN LAAKMR   RTFCNGD STSTL QHKT QD FPISPDL CRQ P TLE MILQLEL EETAR+ K+YNYDEMRGR+SCVNNSDILRSA
Subjt:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA

Query:  WNALTQYPQFSLDGKDVMYRSYFRNLD-AEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAK
         NAL QYP+FSLDGKD MYRS FRNLD AEKAGRKS               FNLTLETALRLPS IAG++VVW KPGVVAKLMGLEAMP  +NA+  KA 
Subjt:  WNALTQYPQFSLDGKDVMYRSYFRNLD-AEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAK

Query:  LTSKLKRQT------------------------------------------PIATESATWKARRFL
        LTS LKRQ+                                          PIATESA WKAR+ L
Subjt:  LTSKLKRQT------------------------------------------PIATESATWKARRFL

TrEMBL top hitse value%identityAlignment
A0A0A0LNU8 VARLMGL domain-containing protein1.1e-7362.41Show/hide
Query:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA
        MKELS F+FKN LAAKMR   RTFCNGDGSTSTL Q KT QD FPISPDL CRQ P TLE MILQLEL EETAR+ K+YNYDEMRGR+SCVNNSDILRSA
Subjt:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA

Query:  WNALTQYPQFSLDGKDVMYRSYFRNLD-AEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAK
         NAL QYP+FSLDGKD MYRS FRNLD AE+ GRKS               FNLTLETALRLPS IAG++VVW KPGVVAKLMGLEAMP  +NA+  KA 
Subjt:  WNALTQYPQFSLDGKDVMYRSYFRNLD-AEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAK

Query:  LTSKLKRQT------------------------------------------PIATESATWKARRFL
        LTS LKRQ+                                          PIATESA W+AR FL
Subjt:  LTSKLKRQT------------------------------------------PIATESATWKARRFL

A0A5D3BIJ6 VARLMGL domain-containing protein1.4e-7362.03Show/hide
Query:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA
        MKELS F+FKN LAAKMR   RTFCNGDGSTSTL QHKT QD FPISPDL CRQ P TLE MILQLEL EETAR+ K+YNYDEMRGR+SCVNNSDILRSA
Subjt:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA

Query:  WNALTQYPQFSLDGKDVMYRSYFRNLD-AEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAK
         NAL QYP+FSLDGKD MYRS FRNLD AE+ GRKS               FNLTLETALRLPS IAG++VVW KPGVVAKLMGLEA+P  +NA+  KA 
Subjt:  WNALTQYPQFSLDGKDVMYRSYFRNLD-AEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAK

Query:  LTSKLKRQT------------------------------------------PIATESATWKARRFL
        L S LKRQ+                                          PIATESA W+AR FL
Subjt:  LTSKLKRQT------------------------------------------PIATESATWKARRFL

A0A6J1C1L3 uncharacterized protein LOC1110074405.3e-7664.15Show/hide
Query:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA
        MKELS F+FKN LAAKMR  IRTFCNGDGSTSTL QHK  QDHFPISPD+ CR+NP TLE MILQLEL EETAR+ K+YNYDEMRGR+SCVNNSDILRSA
Subjt:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA

Query:  WNALTQYPQFSLDGKDVMYRSYFRNLDAEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAKL
         NAL QYP+FSLDGKD MYRS FRNLDA  AGRKS               FNLTLETALRLPS IAG+SVVW KPGVVAKLMGLEA+P  VNAK GKAKL
Subjt:  WNALTQYPQFSLDGKDVMYRSYFRNLDAEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAKL

Query:  TSKLKRQT------------------------------------------PIATESATWKARRFL
        +S LKR                                            PIATESA WKAR+FL
Subjt:  TSKLKRQT------------------------------------------PIATESATWKARRFL

A0A6J1EVK1 uncharacterized protein LOC1114381867.9e-7261.05Show/hide
Query:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA
        MKELS F+FKN LAAKMR   RTFCNGDGSTSTL QHKT QD FP SPD+ C QN  TLE MI+QLEL EETAR+ K+ NY+EMRGR+SCVNNSDILRSA
Subjt:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA

Query:  WNALTQYPQFSLDGKDVMYRSYFRNLDAEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAKL
         NAL QYP+FSLDGKD MYRS FR+  AEK GRKS               FNLTLETALRLPS IAG+SVVW KPGVVAKLMGLEAMPT VNA+CG AKL
Subjt:  WNALTQYPQFSLDGKDVMYRSYFRNLDAEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAKL

Query:  TSKLKRQT--------------------------------------------PIATESATWKARRFL
        +S LK+Q+                                            PIATESA WKAR FL
Subjt:  TSKLKRQT--------------------------------------------PIATESATWKARRFL

A0A6J1L4I6 uncharacterized protein LOC1114998224.6e-7261.42Show/hide
Query:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA
        MKELS F+FKN LAAKMR   RTFCNGDGSTSTL QHKT QD FP SP++ C QN  TLE MILQLEL EETAR+ K+ NYDEMRGR+SCVNNSDILRSA
Subjt:  MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLEL-EETARKEKVYNYDEMRGRISCVNNSDILRSA

Query:  WNALTQYPQFSLDGKDVMYRSYFRNLDAEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAKL
         NAL QYP+FSLDGKD MYRS FR+  AEK GRKS               FNLTLETALRLPS IAG+SVVW KPGVVAKLMGLEAMPT VNA+CG AKL
Subjt:  WNALTQYPQFSLDGKDVMYRSYFRNLDAEKAGRKS---------------FNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAKL

Query:  TSKLKRQT--------------------------------------------PIATESATWKARRFL
        +S LK+Q+                                            PIATESA WKAR FL
Subjt:  TSKLKRQT--------------------------------------------PIATESATWKARRFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGGAATTGTCCTCCTTTGTCTTCAAGAACTGTCTAGCTGCAAAGATGAGAAATGACATCAGAACTTTCTGCAATGGTGATGGTTCTACCTCCACTCTCATTCAACA
CAAAACCAAGCAGGATCACTTCCCTATCTCGCCCGACCTGCTCTGCAGACAGAACCCATCGACCTTGGAGGTGATGATTCTACAGTTGGAATTGGAGGAGACAGCAAGAA
AGGAAAAAGTCTACAACTACGATGAGATGCGAGGCAGGATATCGTGTGTAAACAACTCGGATATCTTACGATCCGCATGGAATGCCTTGACTCAATATCCCCAGTTTTCT
CTTGATGGAAAGGATGTGATGTATCGATCTTACTTTAGGAATTTGGATGCTGAAAAGGCTGGGAGGAAATCATTCAATTTGACGCTGGAGACGGCCTTACGGTTGCCATC
AGCGATAGCGGGAAAGAGTGTCGTGTGGTGCAAACCAGGAGTGGTAGCCAAGTTGATGGGACTCGAGGCAATGCCGACATCAGTGAATGCTAAATGTGGCAAAGCAAAGT
TGACCTCTAAATTGAAGAGACAGACTCCAATTGCAACAGAATCAGCAACATGGAAAGCTAGGCGATTCCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAGGAATTGTCCTCCTTTGTCTTCAAGAACTGTCTAGCTGCAAAGATGAGAAATGACATCAGAACTTTCTGCAATGGTGATGGTTCTACCTCCACTCTCATTCAACA
CAAAACCAAGCAGGATCACTTCCCTATCTCGCCCGACCTGCTCTGCAGACAGAACCCATCGACCTTGGAGGTGATGATTCTACAGTTGGAATTGGAGGAGACAGCAAGAA
AGGAAAAAGTCTACAACTACGATGAGATGCGAGGCAGGATATCGTGTGTAAACAACTCGGATATCTTACGATCCGCATGGAATGCCTTGACTCAATATCCCCAGTTTTCT
CTTGATGGAAAGGATGTGATGTATCGATCTTACTTTAGGAATTTGGATGCTGAAAAGGCTGGGAGGAAATCATTCAATTTGACGCTGGAGACGGCCTTACGGTTGCCATC
AGCGATAGCGGGAAAGAGTGTCGTGTGGTGCAAACCAGGAGTGGTAGCCAAGTTGATGGGACTCGAGGCAATGCCGACATCAGTGAATGCTAAATGTGGCAAAGCAAAGT
TGACCTCTAAATTGAAGAGACAGACTCCAATTGCAACAGAATCAGCAACATGGAAAGCTAGGCGATTCCTCTAG
Protein sequenceShow/hide protein sequence
MKELSSFVFKNCLAAKMRNDIRTFCNGDGSTSTLIQHKTKQDHFPISPDLLCRQNPSTLEVMILQLELEETARKEKVYNYDEMRGRISCVNNSDILRSAWNALTQYPQFS
LDGKDVMYRSYFRNLDAEKAGRKSFNLTLETALRLPSAIAGKSVVWCKPGVVAKLMGLEAMPTSVNAKCGKAKLTSKLKRQTPIATESATWKARRFL