; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020104 (gene) of Chayote v1 genome

Gene IDSed0020104
OrganismSechium edule (Chayote v1)
DescriptionNuclear transcription factor Y subunit
Genome locationLG01:61038883..61041884
RNA-Seq ExpressionSed0020104
SyntenySed0020104
Gene Ontology termsGO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0016602 - CCAAT-binding factor complex (cellular component)
GO:0000978 - RNA polymerase II proximal promoter sequence-specific DNA binding (molecular function)
GO:0000981 - DNA-binding transcription factor activity, RNA polymerase II-specific (molecular function)
InterPro domainsIPR001289 - Nuclear transcription factor Y subunit A
IPR018362 - CCAAT-binding factor, conserved site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6605918.1 Nuclear transcription factor Y subunit A-1, partial [Cucurbita argyrosperma subsp. sororia]5.5e-13377.68Show/hide
Query:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAV
        MQSKSKSVNQ+ESEP N+QQTGSYSEPWWR              N SNSPSLEC NGASESND QSMSN DL+EDD+DD TK++QAASYGQG H+NQ AV
Subjt:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAV

Query:  STAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRI
        STAP VHGG ITQPPQ+ELVGHSIACASN YQDPYYA LMAAYG +   GYPPF+GMPHARMALPLEV QEPVFVNAKQYQGIL+RRQARAKAEVENK I
Subjt:  STAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRI

Query:  KVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEA
        KVRKPYLHESRHQHAMRRARG GGRFAKKNE  S SSTMK+K+SGSGQA+S    S SGSEAVPGALAETWN          S N Q+E   QLHE+YEA
Subjt:  KVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEA

Query:  RSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI
        RSY  GNSHFHNYSSFQASSYA  SGERGED DCS QQRGSI ENQAAQRRLAI
Subjt:  RSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI

XP_022148721.1 nuclear transcription factor Y subunit A-1-like [Momordica charantia]5.0e-13476.84Show/hide
Query:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAV
        M SKSKSVNQLESEP N+QQTGSYSEPWWR              N SNS SLEC NGASESN+GQSMSNDDL+E+D+DDNTKDSQAASYGQ  H+ Q AV
Subjt:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAV

Query:  STAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRI
        STAPTVHGG ITQPPQ+ELVGH+IACASNPYQDPYY  LM AYG +   GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL+RRQARAKAEVENK I
Subjt:  STAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRI

Query:  KVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEA
        KVRKPYLHESRHQHAMRRARG+GGRFAKK+E+NSS STMK+K+ GSGQA+S    S SGSEAVP  LAETWNS NGQ+E             QLHETYEA
Subjt:  KVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEA

Query:  RSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI
        R+Y  G+SHF NYSSFQASSYA R+GERGED DCS QQRGSI ENQAAQRRLAI
Subjt:  RSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI

XP_022958505.1 nuclear transcription factor Y subunit A-1-like [Cucurbita moschata]5.5e-13377.68Show/hide
Query:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAV
        MQSKSKSVNQ+ESEP N+QQTGSYSEPWWR              N SNSPSLEC NGASESND QSMSN DL+EDD+DD TK++QAASYGQG H+NQ AV
Subjt:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAV

Query:  STAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRI
        STAP VHGG ITQPPQ+ELVGHSIACASN YQDPYYA LMAAYG +   GYPPF+GMPHARMALPLEV QEPVFVNAKQYQGIL+RRQARAKAEVENK I
Subjt:  STAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRI

Query:  KVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEA
        KVRKPYLHESRHQHAMRRARG GGRFAKKNE  S SSTMK+K+SGSGQA+S    S SGSEAVPGALAETWN          S N Q+E   QLHE+YEA
Subjt:  KVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEA

Query:  RSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI
        RSY  GNSHFHNYSSFQASSYA  SGERGED DCS QQRGSI ENQAAQRRLAI
Subjt:  RSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI

XP_022995109.1 nuclear transcription factor Y subunit A-1-like [Cucurbita maxima]4.2e-13377.46Show/hide
Query:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDN-TKDSQAASYGQGLHSNQLA
        MQSKSKSVNQ+ESEP N+QQTGSYSEPWWR              N SNSPSLEC NGASESNDGQSMSN DL+EDD+DD+ TK++QAASYGQ  H+NQ A
Subjt:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDN-TKDSQAASYGQGLHSNQLA

Query:  VSTAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKR
        VSTAP VHGG ITQPPQ+ELVGHSIACASN YQDPYYA LMAAYG +   GYPPF+GMPHARMALPLEV QEPVFVNAKQYQGIL+RRQARAKAEVENK 
Subjt:  VSTAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKR

Query:  IKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYE
        IKVRKPYLHESRHQHAMRRARG GGRFAKKNE  S SSTMKNK+SGSGQA+S    S SGSEAVPGAL ETWN          S N Q+E   QLHE+YE
Subjt:  IKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYE

Query:  ARSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI
        ARSY  GNSHFHNYSSFQASSYA  SGERGED DCS QQRGSI ENQAAQRRLAI
Subjt:  ARSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI

XP_023533872.1 nuclear transcription factor Y subunit A-1-like [Cucurbita pepo subsp. pepo]5.5e-13377.46Show/hide
Query:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDN-TKDSQAASYGQGLHSNQLA
        MQ KSKSVNQ+ESEP N+QQTGSYSEPWWR              N SNSPSLEC NGASESNDGQSMSN DL+EDD+DD+ TK++QAASYGQG H+NQ A
Subjt:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDN-TKDSQAASYGQGLHSNQLA

Query:  VSTAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKR
        VSTAP VHGG ITQPPQ+ELVGHSIACASN YQDPYYA LMAAYG +   GYPPF+GMPHARMALPLEV QEPVFVNAKQYQGIL+RRQARAKAEVENK 
Subjt:  VSTAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKR

Query:  IKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYE
        IKVRKPYLHESRHQHAMRRARG GGRFAKKNE  S SSTMK+K+SGSGQA+S    S SGSEAVPGALAETWN          S N Q+E   QLHE+YE
Subjt:  IKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYE

Query:  ARSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI
        ARSY  GNSHFHNYSSFQASSYA  SGERGED DCS QQRGSI ENQAAQRRLAI
Subjt:  ARSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI

TrEMBL top hitse value%identityAlignment
A0A6J1D691 Nuclear transcription factor Y subunit2.4e-13476.84Show/hide
Query:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAV
        M SKSKSVNQLESEP N+QQTGSYSEPWWR              N SNS SLEC NGASESN+GQSMSNDDL+E+D+DDNTKDSQAASYGQ  H+ Q AV
Subjt:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAV

Query:  STAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRI
        STAPTVHGG ITQPPQ+ELVGH+IACASNPYQDPYY  LM AYG +   GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL+RRQARAKAEVENK I
Subjt:  STAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRI

Query:  KVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEA
        KVRKPYLHESRHQHAMRRARG+GGRFAKK+E+NSS STMK+K+ GSGQA+S    S SGSEAVP  LAETWNS NGQ+E             QLHETYEA
Subjt:  KVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEA

Query:  RSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI
        R+Y  G+SHF NYSSFQASSYA R+GERGED DCS QQRGSI ENQAAQRRLAI
Subjt:  RSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI

A0A6J1FTP1 Nuclear transcription factor Y subunit6.1e-13075.42Show/hide
Query:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAV
        MQSK +SVNQLESEP N+QQT SYSEPWWR              N SNS SLEC NGASESNDG SMSNDDL+EDD+DD TKDS A SYGQ  +++Q AV
Subjt:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAV

Query:  STAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRI
        S APTVHGG ITQPPQ+ELVGHSIACASN YQDPYYA +MAAYG     GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL+RRQARAKAEVENK I
Subjt:  STAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRI

Query:  KVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEA
        K+RKPYLHESRHQHAMRRARG+GGRFAKKNE+NSSSSTMKNK SGSGQA S      SGSEA P ALAETWNS NGQ+E             QLHE Y+A
Subjt:  KVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEA

Query:  RSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI
        RSY  G+  FHNYSSFQASSYA RSGERG+D DCS QQRGSI ENQAAQRRLAI
Subjt:  RSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI

A0A6J1H3M1 Nuclear transcription factor Y subunit2.7e-13377.68Show/hide
Query:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAV
        MQSKSKSVNQ+ESEP N+QQTGSYSEPWWR              N SNSPSLEC NGASESND QSMSN DL+EDD+DD TK++QAASYGQG H+NQ AV
Subjt:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAV

Query:  STAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRI
        STAP VHGG ITQPPQ+ELVGHSIACASN YQDPYYA LMAAYG +   GYPPF+GMPHARMALPLEV QEPVFVNAKQYQGIL+RRQARAKAEVENK I
Subjt:  STAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRI

Query:  KVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEA
        KVRKPYLHESRHQHAMRRARG GGRFAKKNE  S SSTMK+K+SGSGQA+S    S SGSEAVPGALAETWN          S N Q+E   QLHE+YEA
Subjt:  KVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEA

Query:  RSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI
        RSY  GNSHFHNYSSFQASSYA  SGERGED DCS QQRGSI ENQAAQRRLAI
Subjt:  RSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI

A0A6J1JHB5 Nuclear transcription factor Y subunit1.8e-12975.42Show/hide
Query:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAV
        MQSK +SVNQLESEP N+QQT SYSEPWWR              N SNS SLEC NGASESNDG SMSNDDL+EDD+DD TKDS A SYGQ  ++ Q AV
Subjt:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAV

Query:  STAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRI
        S APTVHGG ITQPPQ+ELVGHSIACASN YQDPYYA +MAAYG     GYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGIL+RRQARAKAEVENK I
Subjt:  STAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRI

Query:  KVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEA
        K+RKPYLHESRHQHAMRRARG+GGRFAKKNE+NSSSST+KNK SGSGQA S      SGSEA P ALAETWNS NGQ+E             QLHE YEA
Subjt:  KVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEA

Query:  RSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI
        RSY  G+  FHNYSSFQASSYA RSGERG+D DCS QQRGSI ENQAAQRRLAI
Subjt:  RSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI

A0A6J1K375 Nuclear transcription factor Y subunit2.0e-13377.46Show/hide
Query:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDN-TKDSQAASYGQGLHSNQLA
        MQSKSKSVNQ+ESEP N+QQTGSYSEPWWR              N SNSPSLEC NGASESNDGQSMSN DL+EDD+DD+ TK++QAASYGQ  H+NQ A
Subjt:  MQSKSKSVNQLESEPSNIQQTGSYSEPWWRR-------------NASNSPSLECINGASESNDGQSMSNDDLHEDDNDDN-TKDSQAASYGQGLHSNQLA

Query:  VSTAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKR
        VSTAP VHGG ITQPPQ+ELVGHSIACASN YQDPYYA LMAAYG +   GYPPF+GMPHARMALPLEV QEPVFVNAKQYQGIL+RRQARAKAEVENK 
Subjt:  VSTAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKR

Query:  IKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYE
        IKVRKPYLHESRHQHAMRRARG GGRFAKKNE  S SSTMKNK+SGSGQA+S    S SGSEAVPGAL ETWN          S N Q+E   QLHE+YE
Subjt:  IKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYE

Query:  ARSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI
        ARSY  GNSHFHNYSSFQASSYA  SGERGED DCS QQRGSI ENQAAQRRLAI
Subjt:  ARSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI

SwissProt top hitse value%identityAlignment
Q84JP1 Nuclear transcription factor Y subunit A-72.9e-2045.26Show/hide
Query:  HSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRIKVRKPYLHESRHQHAMRRARG
        +S+A    PY DPYY  + A         +   +G+    + LP +  +EPVFVNAKQY GIL+RRQ+RA+ E +NK IK RKPYLHESRH HA+RR RG
Subjt:  HSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRIKVRKPYLHESRHQHAMRRARG

Query:  NGGRF--AKKNEMNSSSSTMKNKKSGSGQAMSLLLGS
         GGRF  AKK + +   S+ + K + S    ++   S
Subjt:  NGGRF--AKKNEMNSSSSTMKNKKSGSGQAMSLLLGS

Q93ZH2 Nuclear transcription factor Y subunit A-31.0e-1736.19Show/hide
Query:  ASNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASY------GQGLHSNQLAVSTAP----TVHGGLITQPPQIELVG----HSIACASN--
        A+   S E ++   +S  G   +   +   D D ++  S   SY      G    S Q++ S       T   G  + P Q  + G    H     +N  
Subjt:  ASNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASY------GQGLHSNQLAVSTAP----TVHGGLITQPPQIELVG----HSIACASN--

Query:  -PYQDPYYARLMAA-YGLNLWYGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGILKRRQARAKAEVENKRIKVRKPYLHESRHQHAMRRARGNGGRF
          Y DP+Y  L+AA Y        P  + M   R+ LP E+T+ +PVFVNAKQY  I++RRQ RAK E +NK I+ RKPYLHESRH HA++R RG+GGRF
Subjt:  -PYQDPYYARLMAA-YGLNLWYGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGILKRRQARAKAEVENKRIKVRKPYLHESRHQHAMRRARGNGGRF

Query:  AKKNEMNSSS
            ++   S
Subjt:  AKKNEMNSSS

Q945M9 Nuclear transcription factor Y subunit A-92.8e-3941.64Show/hide
Query:  MQSKSKS-VNQLESE-PSNIQQTGSYSEPWWRR----NASNS-----PSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAVST
        M SKS S  N+++SE    +  + +   PW R     NA++S      S + I  A ESN  +S SN D   +     T   Q+A  G     NQ     
Subjt:  MQSKSKS-VNQLESE-PSNIQQTGSYSEPWWRR----NASNS-----PSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAVST

Query:  APTVHGGLITQPPQIELVGHSIACA-SNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRIK
          ++H G+   PP  +LVGH++  A SNPYQDPYYA +M AYG +   G+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ IL+RRQARAKAE+E K IK
Subjt:  APTVHGGLITQPPQIELVGHSIACA-SNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRIK

Query:  VRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEAR
         RKPYLHESRHQHAMRR RG GGRFAKK    +S    + K +G       +  S S S +  G   E W   NG   T   P G E             
Subjt:  VRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEAR

Query:  SYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI
                       Q+S+Y     +R E+ +CS QQ  S+  N  +Q RLAI
Subjt:  SYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI

Q9LXV5 Nuclear transcription factor Y subunit A-17.9e-5049.29Show/hide
Query:  MQSKSKSVNQLE-SEPSNIQQTGSYSEPWWRRNA-------------SNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQ-----GLH
        MQSK    N+ E +    +QQ   Y+EPWW+ N+             SNS SL+C NG SESND  S S D     +ND   KDSQAA+  +     G+ 
Subjt:  MQSKSKSVNQLE-SEPSNIQQTGSYSEPWWRRNA-------------SNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQ-----GLH

Query:  SNQLAVSTAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAE
         N  A+S    +H   + QPP  ELVGH IAC  NPYQDPYY  LM AYG +   G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GIL+RR+ARAKAE
Subjt:  SNQLAVSTAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAE

Query:  VENKRIKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSST-MKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNS
        +E K I+ RKPYLHESRH+HAMRRAR +GGRFAKK+E+ +      ++++ GS         + SGSE V     ET NS
Subjt:  VENKRIKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSST-MKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNS

Q9SYH4 Nuclear transcription factor Y subunit A-51.2e-1834.72Show/hide
Query:  DNTKDSQAASYGQGLHSNQLAVSTAPTVHGGLITQPPQIELVGHSIACAS----NPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQ-EPV
        +N       + G+ + +   +++T+  V    +   P    +  S+ CA     N +  P YA    A        +   +G+  +R+ LP  + + EP+
Subjt:  DNTKDSQAASYGQGLHSNQLAVSTAPTVHGGLITQPPQIELVGHSIACAS----NPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQ-EPV

Query:  FVNAKQYQGILKRRQARAKAEVENKRIKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLL---GSWSGSEAV
        FVNAKQY  IL+RR+ RAK E +NK IK RKPYLHESRH HA++RARG+GGRF    ++  SS+++ + +  +GQ  S+     GS  GS ++
Subjt:  FVNAKQYQGILKRRQARAKAEVENKRIKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLL---GSWSGSEAV

Arabidopsis top hitse value%identityAlignment
AT3G20910.1 nuclear factor Y, subunit A92.0e-4041.64Show/hide
Query:  MQSKSKS-VNQLESE-PSNIQQTGSYSEPWWRR----NASNS-----PSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAVST
        M SKS S  N+++SE    +  + +   PW R     NA++S      S + I  A ESN  +S SN D   +     T   Q+A  G     NQ     
Subjt:  MQSKSKS-VNQLESE-PSNIQQTGSYSEPWWRR----NASNS-----PSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAVST

Query:  APTVHGGLITQPPQIELVGHSIACA-SNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRIK
          ++H G+   PP  +LVGH++  A SNPYQDPYYA +M AYG +   G+ P+ GMPH+RM LP E+ QEPVFVNAKQYQ IL+RRQARAKAE+E K IK
Subjt:  APTVHGGLITQPPQIELVGHSIACA-SNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRIK

Query:  VRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEAR
         RKPYLHESRHQHAMRR RG GGRFAKK    +S    + K +G       +  S S S +  G   E W   NG   T   P G E             
Subjt:  VRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEAR

Query:  SYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI
                       Q+S+Y     +R E+ +CS QQ  S+  N  +Q RLAI
Subjt:  SYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSILENQAAQRRLAI

AT5G12840.1 nuclear factor Y, subunit A15.6e-5149.29Show/hide
Query:  MQSKSKSVNQLE-SEPSNIQQTGSYSEPWWRRNA-------------SNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQ-----GLH
        MQSK    N+ E +    +QQ   Y+EPWW+ N+             SNS SL+C NG SESND  S S D     +ND   KDSQAA+  +     G+ 
Subjt:  MQSKSKSVNQLE-SEPSNIQQTGSYSEPWWRRNA-------------SNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQ-----GLH

Query:  SNQLAVSTAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAE
         N  A+S    +H   + QPP  ELVGH IAC  NPYQDPYY  LM AYG +   G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GIL+RR+ARAKAE
Subjt:  SNQLAVSTAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAE

Query:  VENKRIKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSST-MKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNS
        +E K I+ RKPYLHESRH+HAMRRAR +GGRFAKK+E+ +      ++++ GS         + SGSE V     ET NS
Subjt:  VENKRIKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSST-MKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNS

AT5G12840.2 nuclear factor Y, subunit A13.3e-5149.82Show/hide
Query:  MQSKSKSVNQLE-SEPSNIQQTGSYSEPWWRRNA-------------SNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAA----SYGQGLHS
        MQSK    N+ E +    +QQ   Y+EPWW+ N+             SNS SL+C NG SESND  S S D     +ND   KDSQAA    S   G+  
Subjt:  MQSKSKSVNQLE-SEPSNIQQTGSYSEPWWRRNA-------------SNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAA----SYGQGLHS

Query:  NQLAVSTAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEV
        N  A+S    +H   + QPP  ELVGH IAC  NPYQDPYY  LM AYG +   G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GIL+RR+ARAKAE+
Subjt:  NQLAVSTAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEV

Query:  ENKRIKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSST-MKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNS
        E K I+ RKPYLHESRH+HAMRRAR +GGRFAKK+E+ +      ++++ GS         + SGSE V     ET NS
Subjt:  ENKRIKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSST-MKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNS

AT5G12840.3 nuclear factor Y, subunit A15.6e-5149.29Show/hide
Query:  MQSKSKSVNQLE-SEPSNIQQTGSYSEPWWRRNA-------------SNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQ-----GLH
        MQSK    N+ E +    +QQ   Y+EPWW+ N+             SNS SL+C NG SESND  S S D     +ND   KDSQAA+  +     G+ 
Subjt:  MQSKSKSVNQLE-SEPSNIQQTGSYSEPWWRRNA-------------SNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQ-----GLH

Query:  SNQLAVSTAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAE
         N  A+S    +H   + QPP  ELVGH IAC  NPYQDPYY  LM AYG +   G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GIL+RR+ARAKAE
Subjt:  SNQLAVSTAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAE

Query:  VENKRIKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSST-MKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNS
        +E K I+ RKPYLHESRH+HAMRRAR +GGRFAKK+E+ +      ++++ GS         + SGSE V     ET NS
Subjt:  VENKRIKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSST-MKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNS

AT5G12840.4 nuclear factor Y, subunit A13.3e-5149.82Show/hide
Query:  MQSKSKSVNQLE-SEPSNIQQTGSYSEPWWRRNA-------------SNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAA----SYGQGLHS
        MQSK    N+ E +    +QQ   Y+EPWW+ N+             SNS SL+C NG SESND  S S D     +ND   KDSQAA    S   G+  
Subjt:  MQSKSKSVNQLE-SEPSNIQQTGSYSEPWWRRNA-------------SNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAA----SYGQGLHS

Query:  NQLAVSTAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEV
        N  A+S    +H   + QPP  ELVGH IAC  NPYQDPYY  LM AYG +   G+ P+LGMP  R ALPL++ QEPV+VNAKQY+GIL+RR+ARAKAE+
Subjt:  NQLAVSTAPTVHGGLITQPPQIELVGHSIACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEV

Query:  ENKRIKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSST-MKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNS
        E K I+ RKPYLHESRH+HAMRRAR +GGRFAKK+E+ +      ++++ GS         + SGSE V     ET NS
Subjt:  ENKRIKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMNSSSST-MKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCAGTCGAAGTCAAAAAGTGTGAATCAACTTGAATCTGAACCATCAAATATACAGCAGACTGGTAGTTACTCTGAACCTTGGTGGCGTAGAAATGCGTCCAATTCACC
ATCACTGGAATGCATTAATGGTGCTTCGGAATCTAATGATGGTCAGTCAATGTCAAATGATGATTTGCATGAAGATGACAATGACGACAACACGAAAGACTCACAGGCTG
CAAGTTATGGGCAAGGACTGCACAGCAATCAGCTTGCTGTTTCTACAGCACCTACCGTGCATGGTGGACTTATCACACAACCTCCTCAGATTGAACTTGTAGGTCACTCT
ATTGCATGTGCATCAAACCCATATCAGGATCCTTATTATGCTAGACTGATGGCTGCCTATGGGCTCAACCTATGGTATGGTTATCCACCTTTCCTTGGGATGCCACATGC
AAGAATGGCTTTGCCCCTAGAGGTGACGCAGGAGCCAGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAAGCGAAGACAAGCGCGTGCTAAAGCTGAGGTTGAGA
ACAAACGGATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGACACCAGCATGCCATGAGGAGGGCGAGGGGTAATGGTGGACGTTTTGCCAAGAAAAATGAAATGAAC
TCTTCAAGCTCTACCATGAAGAACAAGAAATCTGGTTCTGGTCAAGCTATGTCGTTGCTGTTGGGTAGTTGGTCTGGTTCCGAAGCTGTGCCTGGTGCCTTGGCTGAAAC
ATGGAACTCCCCCAATGGTCAAGAAGAAACAATGGACTCCCCCAATGGTCAAGAAGAAACAATGGGCCAGTTGCATGAGACATATGAAGCTCGTAGTTATGCGAAGGGAA
ATAGCCATTTCCATAATTACAGTAGCTTCCAAGCTTCATCATATGCTTCTCGCTCGGGTGAGAGAGGTGAAGATGAAGACTGTTCGGTACAGCAACGAGGAAGTATCTTA
GAAAATCAGGCAGCACAGAGGCGTCTTGCCATCAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCAGTCGAAGTCAAAAAGTGTGAATCAACTTGAATCTGAACCATCAAATATACAGCAGACTGGTAGTTACTCTGAACCTTGGTGGCGTAGAAATGCGTCCAATTCACC
ATCACTGGAATGCATTAATGGTGCTTCGGAATCTAATGATGGTCAGTCAATGTCAAATGATGATTTGCATGAAGATGACAATGACGACAACACGAAAGACTCACAGGCTG
CAAGTTATGGGCAAGGACTGCACAGCAATCAGCTTGCTGTTTCTACAGCACCTACCGTGCATGGTGGACTTATCACACAACCTCCTCAGATTGAACTTGTAGGTCACTCT
ATTGCATGTGCATCAAACCCATATCAGGATCCTTATTATGCTAGACTGATGGCTGCCTATGGGCTCAACCTATGGTATGGTTATCCACCTTTCCTTGGGATGCCACATGC
AAGAATGGCTTTGCCCCTAGAGGTGACGCAGGAGCCAGTTTTTGTGAATGCCAAACAATATCAAGGGATTCTAAAGCGAAGACAAGCGCGTGCTAAAGCTGAGGTTGAGA
ACAAACGGATAAAAGTTAGAAAGCCATATCTTCATGAATCTCGACACCAGCATGCCATGAGGAGGGCGAGGGGTAATGGTGGACGTTTTGCCAAGAAAAATGAAATGAAC
TCTTCAAGCTCTACCATGAAGAACAAGAAATCTGGTTCTGGTCAAGCTATGTCGTTGCTGTTGGGTAGTTGGTCTGGTTCCGAAGCTGTGCCTGGTGCCTTGGCTGAAAC
ATGGAACTCCCCCAATGGTCAAGAAGAAACAATGGACTCCCCCAATGGTCAAGAAGAAACAATGGGCCAGTTGCATGAGACATATGAAGCTCGTAGTTATGCGAAGGGAA
ATAGCCATTTCCATAATTACAGTAGCTTCCAAGCTTCATCATATGCTTCTCGCTCGGGTGAGAGAGGTGAAGATGAAGACTGTTCGGTACAGCAACGAGGAAGTATCTTA
GAAAATCAGGCAGCACAGAGGCGTCTTGCCATCAATTGA
Protein sequenceShow/hide protein sequence
MQSKSKSVNQLESEPSNIQQTGSYSEPWWRRNASNSPSLECINGASESNDGQSMSNDDLHEDDNDDNTKDSQAASYGQGLHSNQLAVSTAPTVHGGLITQPPQIELVGHS
IACASNPYQDPYYARLMAAYGLNLWYGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILKRRQARAKAEVENKRIKVRKPYLHESRHQHAMRRARGNGGRFAKKNEMN
SSSSTMKNKKSGSGQAMSLLLGSWSGSEAVPGALAETWNSPNGQEETMDSPNGQEETMGQLHETYEARSYAKGNSHFHNYSSFQASSYASRSGERGEDEDCSVQQRGSIL
ENQAAQRRLAIN