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Sed0020132 (gene) of Chayote v1 genome

Gene IDSed0020132
OrganismSechium edule (Chayote v1)
Descriptionprotein RALF-like 4
Genome locationLG14:7835983..7836345
RNA-Seq ExpressionSed0020132
SyntenySed0020132
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7027448.1 Protein RALF-like 4, partial [Cucurbita argyrosperma subsp. argyrosperma]9.2e-2759.17Show/hide
Query:  KLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSK-YADKYLSYEALRKNNIPCGRRGHSYYNCNKKH
        KL L +LL+VVA AP  S             Y  PDYAFFGGY P+ +  +D RRLLFQYG    +K Y  +YLSYEAL  NNIPCGRRG SYY+C K+ 
Subjt:  KLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSK-YADKYLSYEALRKNNIPCGRRGHSYYNCNKKH

Query:  KANPYRRGCIAITGCARFTD
        + NPYRRGC AITGCARFTD
Subjt:  KANPYRRGCIAITGCARFTD

XP_004150814.1 protein RALF-like 4 [Cucumis sativus]1.4e-3062.81Show/hide
Query:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVAD-QDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKK
        MKL L +LL+V AIA     A      DWTRAYG PDYAF+G   P+ + D  D+RRLLFQYG   K    +KYL Y+ALRKNN PC  RGHSYY+C K+
Subjt:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVAD-QDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKK

Query:  HKANPYRRGCIAITGCARFTD
         KANPYRRGCIAITGCARFTD
Subjt:  HKANPYRRGCIAITGCARFTD

XP_016902249.1 PREDICTED: protein RALF-like 4 [Cucumis melo]2.4e-3060.33Show/hide
Query:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVAD-QDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKK
        MKL L +LL+V A A    +    +  DWTRA+G P+YAF+G   P+ + D  D+RRLLFQYG   K    +KYL Y+ALRKNN PC RRGHSYY+C K+
Subjt:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVAD-QDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKK

Query:  HKANPYRRGCIAITGCARFTD
         KANPYRRGCIAITGCARFTD
Subjt:  HKANPYRRGCIAITGCARFTD

XP_022925244.1 protein RALF-like 31 [Cucurbita moschata]3.2e-2759.5Show/hide
Query:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSK-YADKYLSYEALRKNNIPCGRRGHSYYNCNKK
        MKL L +LL+VVA AP  S             Y  PDYAFFGGY P+ +  +D RRLLFQYG    +K Y  +YLSYEAL  NNIPCGRRG SYY+C K+
Subjt:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSK-YADKYLSYEALRKNNIPCGRRGHSYYNCNKK

Query:  HKANPYRRGCIAITGCARFTD
         + NPYRRGC AITGCARFTD
Subjt:  HKANPYRRGCIAITGCARFTD

XP_038876152.1 uncharacterized protein LOC120068449 [Benincasa hispida]1.4e-3063.33Show/hide
Query:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKKH
        MKL LF LL+V A++P S   F+ S  DWT AYG P+YAF+G  TP+    +D RRLLFQYG   K    ++YLSYEALRKNN+PCG RG SYY+CN+  
Subjt:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKKH

Query:  KANPYRRGCIAITGCARFTD
        KANPYRRGC AITGCARFTD
Subjt:  KANPYRRGCIAITGCARFTD

TrEMBL top hitse value%identityAlignment
A0A0A0KCD7 F3H9.8 protein6.7e-3162.81Show/hide
Query:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVAD-QDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKK
        MKL L +LL+V AIA     A      DWTRAYG PDYAF+G   P+ + D  D+RRLLFQYG   K    +KYL Y+ALRKNN PC  RGHSYY+C K+
Subjt:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVAD-QDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKK

Query:  HKANPYRRGCIAITGCARFTD
         KANPYRRGCIAITGCARFTD
Subjt:  HKANPYRRGCIAITGCARFTD

A0A1S4E1Z3 protein RALF-like 41.1e-3060.33Show/hide
Query:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVAD-QDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKK
        MKL L +LL+V A A    +    +  DWTRA+G P+YAF+G   P+ + D  D+RRLLFQYG   K    +KYL Y+ALRKNN PC RRGHSYY+C K+
Subjt:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVAD-QDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKK

Query:  HKANPYRRGCIAITGCARFTD
         KANPYRRGCIAITGCARFTD
Subjt:  HKANPYRRGCIAITGCARFTD

A0A5A7SVY5 Protein RALF-like 41.1e-3060.33Show/hide
Query:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVAD-QDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKK
        MKL L +LL+V A A    +    +  DWTRA+G P+YAF+G   P+ + D  D+RRLLFQYG   K    +KYL Y+ALRKNN PC RRGHSYY+C K+
Subjt:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVAD-QDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKK

Query:  HKANPYRRGCIAITGCARFTD
         KANPYRRGCIAITGCARFTD
Subjt:  HKANPYRRGCIAITGCARFTD

A0A5D3DPV5 Protein RALF-like 191.7e-2657.5Show/hide
Query:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKKH
        MKL LF+L++ V  AP    AFS+   DWT AY  P+Y F          ++D+RRLLFQYG   K    +KYL Y+ALRKNN PC  RG SYY+C K+ 
Subjt:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKKH

Query:  KANPYRRGCIAITGCARFTD
        KANPYRRGCIAITGCARFTD
Subjt:  KANPYRRGCIAITGCARFTD

A0A6J1EBL1 protein RALF-like 311.5e-2759.5Show/hide
Query:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSK-YADKYLSYEALRKNNIPCGRRGHSYYNCNKK
        MKL L +LL+VVA AP  S             Y  PDYAFFGGY P+ +  +D RRLLFQYG    +K Y  +YLSYEAL  NNIPCGRRG SYY+C K+
Subjt:  MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSK-YADKYLSYEALRKNNIPCGRRGHSYYNCNKK

Query:  HKANPYRRGCIAITGCARFTD
         + NPYRRGC AITGCARFTD
Subjt:  HKANPYRRGCIAITGCARFTD

SwissProt top hitse value%identityAlignment
Q6NME6 Protein RALF-like 194.6e-1368.09Show/hide
Query:  YLSYEALRKNNIPCGRRGHSYYNCNKKHKANPYRRGCIAITGCARFT
        Y+SY ALRKNN+PC RRG SYY+C K+ +ANPYRRGC  IT C R T
Subjt:  YLSYEALRKNNIPCGRRGHSYYNCNKKHKANPYRRGCIAITGCARFT

Q8L9P8 Protein RALF-like 331.9e-1165.22Show/hide
Query:  KYLSYEALRKNNIPCGRRGHSYYNCNKKHKANPYRRGCIAITGCAR
        KY+SY ALR+N +PC RRG SYYNC +  +ANPY RGC AIT C R
Subjt:  KYLSYEALRKNNIPCGRRGHSYYNCNKKHKANPYRRGCIAITGCAR

Q9FZA0 Protein RALF-like 46.0e-1361.7Show/hide
Query:  KYLSYEALRKNNIPCGRRGHSYYNCNKKHKANPYRRGCIAITGCARF
        +Y+ Y+AL+KNN+PC RRG SYY+C K+ + NPYRRGC AIT C R+
Subjt:  KYLSYEALRKNNIPCGRRGHSYYNCNKKHKANPYRRGCIAITGCARF

Q9LUS7 Rapid alkalinization factor 232.5e-1133.58Show/hide
Query:  SLFVLLVVVAIAPYSSSAFSESTK-------------------DWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSKYAD-KYLSYEALRKNN
        ++F +L+++A+  +S +  S+ST+                     + A G     F+GG       + D+         +N+   A  +Y+SY ALR+N 
Subjt:  SLFVLLVVVAIAPYSSSAFSESTK-------------------DWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSKYAD-KYLSYEALRKNN

Query:  IPCGRRGHSYYNCNKKHKANPYRRGCIAITGCAR
        IPC RRG SYYNC +  +ANPY RGC AIT C R
Subjt:  IPCGRRGHSYYNCNKKHKANPYRRGCIAITGCAR

Q9MA62 Protein RALF-like 222.3e-1235.96Show/hide
Query:  SLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKKHKAN
        ++  +L +V  A  S+  F +S  D+ RA  +  ++   G     +A+++   + F   I  +     KY+SY A+R+N++PC RRG SYYNC +  +AN
Subjt:  SLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKKHKAN

Query:  PYRRGCIAITGCAR
        PY RGC  IT C R
Subjt:  PYRRGCIAITGCAR

Arabidopsis top hitse value%identityAlignment
AT1G28270.1 ralf-like 44.3e-1461.7Show/hide
Query:  KYLSYEALRKNNIPCGRRGHSYYNCNKKHKANPYRRGCIAITGCARF
        +Y+ Y+AL+KNN+PC RRG SYY+C K+ + NPYRRGC AIT C R+
Subjt:  KYLSYEALRKNNIPCGRRGHSYYNCNKKHKANPYRRGCIAITGCARF

AT2G33775.1 ralf-like 193.3e-1468.09Show/hide
Query:  YLSYEALRKNNIPCGRRGHSYYNCNKKHKANPYRRGCIAITGCARFT
        Y+SY ALRKNN+PC RRG SYY+C K+ +ANPYRRGC  IT C R T
Subjt:  YLSYEALRKNNIPCGRRGHSYYNCNKKHKANPYRRGCIAITGCARFT

AT3G05490.1 ralf-like 221.6e-1335.96Show/hide
Query:  SLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKKHKAN
        ++  +L +V  A  S+  F +S  D+ RA  +  ++   G     +A+++   + F   I  +     KY+SY A+R+N++PC RRG SYYNC +  +AN
Subjt:  SLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKKHKAN

Query:  PYRRGCIAITGCAR
        PY RGC  IT C R
Subjt:  PYRRGCIAITGCAR

AT3G16570.1 rapid alkalinization factor 231.8e-1233.58Show/hide
Query:  SLFVLLVVVAIAPYSSSAFSESTK-------------------DWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSKYAD-KYLSYEALRKNN
        ++F +L+++A+  +S +  S+ST+                     + A G     F+GG       + D+         +N+   A  +Y+SY ALR+N 
Subjt:  SLFVLLVVVAIAPYSSSAFSESTK-------------------DWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSKYAD-KYLSYEALRKNN

Query:  IPCGRRGHSYYNCNKKHKANPYRRGCIAITGCAR
        IPC RRG SYYNC +  +ANPY RGC AIT C R
Subjt:  IPCGRRGHSYYNCNKKHKANPYRRGCIAITGCAR

AT4G15800.1 ralf-like 331.4e-1265.22Show/hide
Query:  KYLSYEALRKNNIPCGRRGHSYYNCNKKHKANPYRRGCIAITGCAR
        KY+SY ALR+N +PC RRG SYYNC +  +ANPY RGC AIT C R
Subjt:  KYLSYEALRKNNIPCGRRGHSYYNCNKKHKANPYRRGCIAITGCAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGCTCTCCCTCTTTGTCCTCCTGGTGGTTGTGGCCATTGCTCCTTATTCCTCCTCCGCGTTCTCGGAAAGCACTAAAGACTGGACCCGTGCCTACGGCACTCCCGA
CTATGCATTCTTCGGTGGATACACACCGTCCGTGGTCGCTGATCAAGACACTCGACGACTACTTTTCCAATATGGTATTGTTAATAAGTCCAAGTACGCTGATAAATATT
TGAGCTACGAAGCACTTCGAAAGAACAATATTCCTTGCGGTCGTCGAGGCCACTCTTATTATAATTGCAACAAGAAACATAAGGCCAATCCTTATCGTCGTGGTTGCATT
GCCATCACCGGTTGCGCCAGATTCACCGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAGCTCTCCCTCTTTGTCCTCCTGGTGGTTGTGGCCATTGCTCCTTATTCCTCCTCCGCGTTCTCGGAAAGCACTAAAGACTGGACCCGTGCCTACGGCACTCCCGA
CTATGCATTCTTCGGTGGATACACACCGTCCGTGGTCGCTGATCAAGACACTCGACGACTACTTTTCCAATATGGTATTGTTAATAAGTCCAAGTACGCTGATAAATATT
TGAGCTACGAAGCACTTCGAAAGAACAATATTCCTTGCGGTCGTCGAGGCCACTCTTATTATAATTGCAACAAGAAACATAAGGCCAATCCTTATCGTCGTGGTTGCATT
GCCATCACCGGTTGCGCCAGATTCACCGATTAA
Protein sequenceShow/hide protein sequence
MKLSLFVLLVVVAIAPYSSSAFSESTKDWTRAYGTPDYAFFGGYTPSVVADQDTRRLLFQYGIVNKSKYADKYLSYEALRKNNIPCGRRGHSYYNCNKKHKANPYRRGCI
AITGCARFTD