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Sed0020145 (gene) of Chayote v1 genome

Gene IDSed0020145
OrganismSechium edule (Chayote v1)
Descriptionconserved peptide upstream open reading frame 28
Genome locationLG11:30284613..30284771
RNA-Seq ExpressionSed0020145
SyntenySed0020145
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAF7808682.1 hypothetical protein G2W53_035425 [Senna tora]4.9e-0973.47Show/hide
Query:  ENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
        E  SSS++MRSL  SR SA L L +SS+S+FAFGSCKEGWYYRCLGVDP
Subjt:  ENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
KAG7032577.1 hypothetical protein SDJN02_06626, partial [Cucurbita argyrosperma subsp. argyrosperma]7.3e-1386Show/hide
Query:  MVEENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGV
        MVEENSSSSNYMRSLLDSR SA LPL  S+ SSFAFGSCKEGWYYRCLG+
Subjt:  MVEENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGV
XP_008467130.2 PREDICTED: uncharacterized protein LOC103504558 [Cucumis melo]2.7e-1588.46Show/hide
Query:  MVEENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
        MVEENSSSSNYMRSLLDSR SA LPL  S++SSFAFGSCKEGWYYRCLGVDP
Subjt:  MVEENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
XP_016647517.1 PREDICTED: uncharacterized protein LOC107880498 [Prunus mume]2.2e-0976.09Show/hide
Query:  SSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
        S SN+MRSLL SR SA LP+  S++S+FAFGSCKEGWYYRCLGVDP
Subjt:  SSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
XP_017971818.1 PREDICTED: uncharacterized protein LOC108660978 [Theobroma cacao]8.4e-0967.31Show/hide
Query:  MVEENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
        MVE   S SN+M SL  SR SA LP+  S++S+FAFGSCKEGWYYRCLG+DP
Subjt:  MVEENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
TrEMBL top hitse value%identityAlignment
A0A1S3CSS9 uncharacterized protein LOC1035045581.3e-1588.46Show/hide
Query:  MVEENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
        MVEENSSSSNYMRSLLDSR SA LPL  S++SSFAFGSCKEGWYYRCLGVDP
Subjt:  MVEENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
A0A251R6V3 Uncharacterized protein1.1e-0976.09Show/hide
Query:  SSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
        S SN+MRSLL SR SA LP+  S++S+FAFGSCKEGWYYRCLGVDP
Subjt:  SSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
A0A2P6R3E4 Uncharacterized protein1.3e-0767.39Show/hide
Query:  SSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
        S SN+MRS+  SR SA + L  S++S+F+FGSCKEGWYYRCLGVDP
Subjt:  SSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
A0A5D2MAG5 Uncharacterized protein5.0e-0765.38Show/hide
Query:  MVEENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
        MVE   S S  M SL  SR S  LPL  S++S+FAFGSCKEGWYYRCLG+DP
Subjt:  MVEENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
A0A5D3E3V5 Senescence-associated protein1.3e-0785.71Show/hide
Query:  MVEENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEG
        MVEENSSSSNYMRSLLDSR SA LPL  S++SSFAFGSCKEG
Subjt:  MVEENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEG
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G23149.1 conserved peptide upstream open reading frame 292.9e-0750Show/hide
Query:  MVEENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
        MVE N    N+  +L   R S  L +  S  S F+FGSCKEGWY+RC+G+DP
Subjt:  MVEENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
AT1G70782.1 conserved peptide upstream open reading frame 288.1e-1059.62Show/hide
Query:  MVEENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP
        MVE N     +  SL   R S  LPL  S+SS FAFGSCKEGWY+RCLG+DP
Subjt:  MVEENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGGAAGAAAATTCAAGTAGTAGTAATTACATGCGCTCCCTTTTGGATTCAAGGGTGAGCGCTCCTCTTCCTCTTTCTTCTTCTTCGTCTTCTTCATTCGCTTTTGG
TTCTTGCAAGGAAGGTTGGTATTATCGCTGCCTTGGTGTTGACCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGGAAGAAAATTCAAGTAGTAGTAATTACATGCGCTCCCTTTTGGATTCAAGGGTGAGCGCTCCTCTTCCTCTTTCTTCTTCTTCGTCTTCTTCATTCGCTTTTGG
TTCTTGCAAGGAAGGTTGGTATTATCGCTGCCTTGGTGTTGACCCTTGA
Protein sequenceShow/hide protein sequence
MVEENSSSSNYMRSLLDSRVSAPLPLSSSSSSSFAFGSCKEGWYYRCLGVDP