CuGenDBv2

Gene ID	Sed0020146
Organism	Sechium edule (Chayote v1)
Description	Chalcone-flavonone isomerase family protein
Genome location	LG04:2475881..2479844
RNA-Seq Expression	Sed0020146
Synteny	Sed0020146
Gene Ontology terms	GO:0009813 - flavonoid biosynthetic process (biological process) GO:0016872 - intramolecular lyase activity (molecular function)
InterPro domains	IPR016087 - Chalcone isomerase IPR016088 - Chalcone isomerase, 3-layer sandwich IPR036298 - Chalcone isomerase superfamily IPR044191 - Chalcone--flavonone isomerase 3-like

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0066987.1 putative chalcone--flavonone isomerase 3 [Cucumis melo var. makuwa]

9.7e-45

82.11

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Query:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM
        +A VEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIV+FFQSKYLK HSVI+FHFP   TIA+IEF S+ KE SKMK+ENGNVVEM
Subjt:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM

Query:  IKKWYLGGTRGSPVNNPSCCSYA
        IKKWYLGGTRG  V+ P+  S A
Subjt:  IKKWYLGGTRGSPVNNPSCCSYA

XP_008456952.1 PREDICTED: probable chalcone--flavonone isomerase 3 [Cucumis melo]

9.7e-45

82.11

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Query:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM
        +A VEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIV+FFQSKYLK HSVI+FHFP   TIA+IEF S+ KE SKMK+ENGNVVEM
Subjt:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM

Query:  IKKWYLGGTRGSPVNNPSCCSYA
        IKKWYLGGTRG  V+ P+  S A
Subjt:  IKKWYLGGTRGSPVNNPSCCSYA

XP_011655047.1 probable chalcone--flavonone isomerase 3 isoform X1 [Cucumis sativus]

4.3e-45

82.93

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Query:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM
        +A VEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIV+FFQSKYLK HSVI+FHFP   TIAEIEF S+ KE SKMK+ENGNVVEM
Subjt:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM

Query:  IKKWYLGGTRGSPVNNPSCCSYA
        IKKWYLGGTRG  V+ P+  S A
Subjt:  IKKWYLGGTRGSPVNNPSCCSYA

XP_011655048.1 probable chalcone--flavonone isomerase 3 isoform X2 [Cucumis sativus]

4.3e-45

82.93

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Query:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM
        +A VEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIV+FFQSKYLK HSVI+FHFP   TIAEIEF S+ KE SKMK+ENGNVVEM
Subjt:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM

Query:  IKKWYLGGTRGSPVNNPSCCSYA
        IKKWYLGGTRG  V+ P+  S A
Subjt:  IKKWYLGGTRGSPVNNPSCCSYA

XP_023527694.1 probable chalcone--flavonone isomerase 3 [Cucurbita pepo subsp. pepo]

2.8e-44

85.59

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Query:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM
        +A VEK IRVVVIKEIKG+QYG+QLE+AVRDRLAADDKYE+EEEAQLEK+V+FF+SKYL AHSVISFHFPS PTIAEIEF S GKE SKMK+ENGNVVEM
Subjt:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM

Query:  IKKWYLGGTRG
        IKKWYLGGTRG
Subjt:  IKKWYLGGTRG

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KPA3 Chalcone-flavonone isomerase family protein

2.1e-45

82.93

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Query:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM
        +A VEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIV+FFQSKYLK HSVI+FHFP   TIAEIEF S+ KE SKMK+ENGNVVEM
Subjt:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM

Query:  IKKWYLGGTRGSPVNNPSCCSYA
        IKKWYLGGTRG  V+ P+  S A
Subjt:  IKKWYLGGTRGSPVNNPSCCSYA

A0A1S3C525 Chalcone-flavonone isomerase family protein

4.7e-45

82.11

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Query:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM
        +A VEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIV+FFQSKYLK HSVI+FHFP   TIA+IEF S+ KE SKMK+ENGNVVEM
Subjt:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM

Query:  IKKWYLGGTRGSPVNNPSCCSYA
        IKKWYLGGTRG  V+ P+  S A
Subjt:  IKKWYLGGTRGSPVNNPSCCSYA

A0A5D3BCV3 Chalcone-flavonone isomerase family protein

4.7e-45

82.11

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Query:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM
        +A VEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIV+FFQSKYLK HSVI+FHFP   TIA+IEF S+ KE SKMK+ENGNVVEM
Subjt:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM

Query:  IKKWYLGGTRGSPVNNPSCCSYA
        IKKWYLGGTRG  V+ P+  S A
Subjt:  IKKWYLGGTRGSPVNNPSCCSYA

A0A6J1FS51 Chalcone-flavonone isomerase family protein

1.8e-44

75.19

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Query:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM
        +A VEK IRVVVIKEIKG+QYG+QLE+AVRDRLAADDKYE+EEEAQLEK+V+FF+SKYL +HSVISFHFPS PTIAEIEFLS+ KE SKMK+ENGNVVEM
Subjt:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM

Query:  IKKWYLGGTRGSPVNNPSCCSYACLINIS
        IKKWYLGGTRG+     S  +    I +S
Subjt:  IKKWYLGGTRGSPVNNPSCCSYACLINIS

A0A6J1JR17 Chalcone-flavonone isomerase family protein

6.8e-44

83.78

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Query:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM
        +A VEK +RV VIKEIKG+QY +QLE+AVRDRLAADDKYE+EEEAQLEKIV+FF+SKYL AHSVISFHFPS PTIAEIEF S+GKE SKMK+ENGNVVEM
Subjt:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM

Query:  IKKWYLGGTRG
        IKKWYLGGTRG
Subjt:  IKKWYLGGTRG

SwissProt top hits

e value

%identity

Alignment

A0A2U7XUE3 Chalcone isomerase-like protein 2

1.3e-36

70.27

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Query:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM
        +A VEK +R+VVIKEIKGSQYGVQLES+VRDRLAA+D YE+EEEA LEKIV+F QSKY K  ++I+FHFP+    AEI    EGKE SK+K+EN NVV+M
Subjt:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM

Query:  IKKWYLGGTRG
        IKKWYLGGT G
Subjt:  IKKWYLGGTRG

Q8VZW3 Probable chalcone--flavanone isomerase 3

1.1e-35

66.67

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Query:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM
        +A +EKVIRVVVIKEIKG+QYGVQLE+ VRDRLA +DKYE+EEE +LEK+V FFQSKY KA+SVI++HF ++  I EI F +EGKE  K+K+EN NVV M
Subjt:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM

Query:  IKKWYLGGTRG
        +++WYL G+RG
Subjt:  IKKWYLGGTRG

Arabidopsis top hits

e value

%identity

Alignment

AT5G05270.1 Chalcone-flavanone isomerase family protein

7.9e-37

66.67

Show/hide

Query:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM
        +A +EKVIRVVVIKEIKG+QYGVQLE+ VRDRLA +DKYE+EEE +LEK+V FFQSKY KA+SVI++HF ++  I EI F +EGKE  K+K+EN NVV M
Subjt:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM

Query:  IKKWYLGGTRG
        +++WYL G+RG
Subjt:  IKKWYLGGTRG

AT5G05270.2 Chalcone-flavanone isomerase family protein

7.9e-37

66.67

Show/hide

Query:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM
        +A +EKVIRVVVIKEIKG+QYGVQLE+ VRDRLA +DKYE+EEE +LEK+V FFQSKY KA+SVI++HF ++  I EI F +EGKE  K+K+EN NVV M
Subjt:  AAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEM

Query:  IKKWYLGGTRG
        +++WYL G+RG
Subjt:  IKKWYLGGTRG

Sequences

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CDS sequence

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ATGGTCGATGCAGCTGCAGTTGAGAAGGTGATAAGAGTTGTGGTGATCAAAGAGATAAAGGGGTCACAATATGGGGTGCAGTTGGAGAGTGCAGTGAGGGATAGATTGGC
AGCTGATGACAAGTATGAGGATGAAGAGGAAGCTCAGTTGGAGAAAATTGTTGACTTCTTTCAGTCCAAATATTTGAAGGCACACTCTGTTATCAGCTTCCATTTCCCAT
CTCAACCAACCATTGCTGAGATCGAGTTTTTGAGCGAAGGGAAGGAGAGCTCGAAGATGAAAATAGAGAACGGGAATGTCGTCGAGATGATCAAAAAATGGTATTTGGGA
GGGACTAGAGGTAGTCCAGTGAACAACCCTTCATGTTGTTCATATGCTTGCCTGATCAACATCTCCAATCCAGGTACACTAGCCACTCCAGATTCTTTAGCTTCCCTCAG
GACTCTGGTCATCTTTGGCGTGTAA

mRNA sequence

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Protein sequence

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MVDAAAVEKVIRVVVIKEIKGSQYGVQLESAVRDRLAADDKYEDEEEAQLEKIVDFFQSKYLKAHSVISFHFPSQPTIAEIEFLSEGKESSKMKIENGNVVEMIKKWYLG
GTRGSPVNNPSCCSYACLINISNPGTLATPDSLASLRTLVIFGV

Sed0020146 (gene) of Chayote v1 genome