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Sed0020165 (gene) of Chayote v1 genome

Gene IDSed0020165
OrganismSechium edule (Chayote v1)
Descriptionarabinogalactan peptide 13-like
Genome locationLG12:27789488..27790157
RNA-Seq ExpressionSed0020165
SyntenySed0020165
Gene Ontology termsGO:0031225 - anchored component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7022018.1 Arabinogalactan peptide 14, partial [Cucurbita argyrosperma subsp. argyrosperma]1.5e-0672.13Show/hide
Query:  MEAMKFQVLI--LVTIVVALSSSIVAAQQAPAPSPHSDAPTSSLPTLMASLAPLLLLPFFL
        M AMKF+ L+  +V  V+A SSSIVAAQ+APAPSP SDAP  SLPTLMASLAP L+LPFFL
Subjt:  MEAMKFQVLI--LVTIVVALSSSIVAAQQAPAPSPHSDAPTSSLPTLMASLAPLLLLPFFL

KAG7023913.1 Arabinogalactan peptide 14, partial [Cucurbita argyrosperma subsp. argyrosperma]7.5e-0672.13Show/hide
Query:  MEAMKFQVLILVTIV--VALSSSIVAAQQAPAPSPHSDAPTSSLPTLMASLAPLLLLPFFL
        MEAMKFQ L+L  +V  +ALSS+IVAAQ+APAPSP SDA + SLPTLMASLAP L L FFL
Subjt:  MEAMKFQVLILVTIV--VALSSSIVAAQQAPAPSPHSDAPTSSLPTLMASLAPLLLLPFFL

XP_022988237.1 arabinogalactan peptide 13-like [Cucurbita maxima]1.5e-0673.77Show/hide
Query:  MEAMKFQVLILVTIV--VALSSSIVAAQQAPAPSPHSDAPTSSLPTLMASLAPLLLLPFFL
        MEAMKFQ L+L  +V  +ALSS+IVAAQ+APAPSP SDAP  SLPTLMASLAP L L FFL
Subjt:  MEAMKFQVLILVTIV--VALSSSIVAAQQAPAPSPHSDAPTSSLPTLMASLAPLLLLPFFL

XP_038879727.1 arabinogalactan protein 13-like [Benincasa hispida]1.7e-0569.84Show/hide
Query:  MEAMKFQVLILVTIVVAL----SSSIVAAQQAPAPSPHSDAPTSSLPTLMASLAPLLLLPFFL
        MEAMK Q L+++ +VV L    SSSIVAAQ+APAPSP SDAP  SLPTLMASLAP L+L FFL
Subjt:  MEAMKFQVLILVTIVVAL----SSSIVAAQQAPAPSPHSDAPTSSLPTLMASLAPLLLLPFFL

TrEMBL top hitse value%identityAlignment
A0A6J1JCI6 arabinogalactan peptide 13-like7.4e-0773.77Show/hide
Query:  MEAMKFQVLILVTIV--VALSSSIVAAQQAPAPSPHSDAPTSSLPTLMASLAPLLLLPFFL
        MEAMKFQ L+L  +V  +ALSS+IVAAQ+APAPSP SDAP  SLPTLMASLAP L L FFL
Subjt:  MEAMKFQVLILVTIV--VALSSSIVAAQQAPAPSPHSDAPTSSLPTLMASLAPLLLLPFFL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGCAATGAAGTTTCAAGTTTTGATATTGGTGACAATTGTTGTGGCTTTGTCATCCTCCATTGTTGCAGCTCAACAAGCTCCTGCTCCAAGCCCCCATTCTGATGC
TCCAACTTCTTCTCTCCCAACTTTAATGGCTTCTCTTGCTCCTCTTCTTCTTCTTCCCTTTTTCCTCTAA
mRNA sequenceShow/hide mRNA sequence
TATATATTGTGTGTGTGGGGCTATAAATACCAGCAAACCCACCATCATTACCCTTGACAAAAGCCTCTGTTTCAAAAAAAAAAATCCAAGAGAAACCCATTTGAAAGCTC
AAATCTTTTAGAAGAAAAAAAAAATCAAAGGTTTAAGCTAATTTGTTTGGTTTTGATTCATTCATCAATGGAGGCAATGAAGTTTCAAGTTTTGATATTGGTGACAATTG
TTGTGGCTTTGTCATCCTCCATTGTTGCAGCTCAACAAGCTCCTGCTCCAAGCCCCCATTCTGATGCTCCAACTTCTTCTCTCCCAACTTTAATGGCTTCTCTTGCTCCT
CTTCTTCTTCTTCCCTTTTTCCTCTAAATTTCATCTTCTCTTTTAATAAATTTCTCTCACCATTTATTATTGTAACTTTCTATGGATTATATATCTATTATTTGTCTTGT
AAGTCTAAACCAATTTTCTTCATATTTTTTTTCTCTAGAAATTATGGAATATCTATGAAGGGAAAGATTGGAGAGATGGGTTGGTGTTCTTTTTTAAGGATTTATTAGGG
CTTGTTGATTGTGAGGTGATGATTCAATTTGTTTTTGGTGTGATTTTGGATTATTAATTTTATGTATATTTTCAATGTTTCATGCCTATGTTTTTACTCTCTAATTATCT
TTTGATATCA
Protein sequenceShow/hide protein sequence
MEAMKFQVLILVTIVVALSSSIVAAQQAPAPSPHSDAPTSSLPTLMASLAPLLLLPFFL