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Sed0020212 (gene) of Chayote v1 genome

Gene IDSed0020212
OrganismSechium edule (Chayote v1)
DescriptionZinc finger and BTB domain-containing protein 47
Genome locationLG11:25493942..25500035
RNA-Seq ExpressionSed0020212
SyntenySed0020212
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0065239.1 zinc finger and BTB domain-containing protein 47 [Cucumis melo var. makuwa]7.8e-2668.85Show/hide
Query:  MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPP---PDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQE
        MGKKK  KTK IA AIAE STSK  +D  G GQS QPRKRGRPRKVLDE  +EQ N++LPPPP   P+V + PPEKK K T DEPPP  V   SKQ+E  
Subjt:  MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPP---PDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQE

Query:  KPKPGDGSRSRGRRKNKPRKSS
         PK GDGSRSRGRRKNKPRKSS
Subjt:  KPKPGDGSRSRGRRKNKPRKSS

KAG7020516.1 hypothetical protein SDJN02_17201, partial [Cucurbita argyrosperma subsp. argyrosperma]8.0e-3173.55Show/hide
Query:  MGKKKPHKTKHIAAAIAEASTSKSPEDAG--GGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEK
        MGKKK  KTK I+ AIAE STSK P+D G  GGGQS QPRKRGRPRKVLDEPPD+   ++LPPPP DVADKP +KK K TGDEPP + + GASKQ E E+
Subjt:  MGKKKPHKTKHIAAAIAEASTSKSPEDAG--GGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEK

Query:  PKPGDGSRSRGRRKNKPRKSS
        PK GDGSRSRGRRKNKPRKSS
Subjt:  PKPGDGSRSRGRRKNKPRKSS

XP_023002541.1 uncharacterized protein LOC111496353 [Cucurbita maxima]5.2e-3073.55Show/hide
Query:  MGKKKPHKTKHIAAAIAEASTSKSPEDAG--GGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEK
        MGKKK  KTK I+ AIAE STSK P+D G  GGGQS QPRKRGRPRKVLDEPPD++  + LPPP  DVADKP +KK K TGDEPP + + GASKQQE E+
Subjt:  MGKKKPHKTKHIAAAIAEASTSKSPEDAG--GGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEK

Query:  PKPGDGSRSRGRRKNKPRKSS
        PK GDGSRSRGRRKNKPRKSS
Subjt:  PKPGDGSRSRGRRKNKPRKSS

XP_023537340.1 uncharacterized protein LOC111798433 [Cucurbita pepo subsp. pepo]3.0e-3073.55Show/hide
Query:  MGKKKPHKTKHIAAAIAEASTSKSPEDAG--GGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEK
        MGKKK  KTK I+ AIAE STSK P+D G  GGGQS QPRKRGRPRKVLDEPPD++  + LPPPP DVADKP +KK K TGDEPP + + GASKQ E E+
Subjt:  MGKKKPHKTKHIAAAIAEASTSKSPEDAG--GGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEK

Query:  PKPGDGSRSRGRRKNKPRKSS
        PK GDGSRSRGRRKNKPRKSS
Subjt:  PKPGDGSRSRGRRKNKPRKSS

XP_038884964.1 uncharacterized protein LOC120075548 [Benincasa hispida]5.9e-2668.91Show/hide
Query:  MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEKPK
        MGKKKP KTK IA AIAE S SK  +D  G GQS QPRKRGRPRKVLDEP ++Q N++L PP P+VA+ PPEKKAK T D+PPP  +   SKQ E   PK
Subjt:  MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEKPK

Query:  PGDGSRSRGRRKNKPRKSS
         GDGSRSRGRRKNKPRKSS
Subjt:  PGDGSRSRGRRKNKPRKSS

TrEMBL top hitse value%identityAlignment
A0A0A0LRH2 Uncharacterized protein1.2e-1962.18Show/hide
Query:  MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEKPK
        MGKKK  KTK IA AIAE STSK  +D G  GQ  QPRKRGRPRKVL+E  +EQ +++ PPP  +VA+ PPEKK K T DE     ++  SK++E   PK
Subjt:  MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEKPK

Query:  PGDGSRSRGRRKNKPRKSS
         GDGSRSRGRRKNKPRKSS
Subjt:  PGDGSRSRGRRKNKPRKSS

A0A251R9L0 Uncharacterized protein4.0e-0440.71Show/hide
Query:  MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLD--EPPDEQG---NQELPPPPPDVADKPPEKKAKLTGD---------------
        MGKKKP KTK ++ AIAEA ++          Q   PRKRGRPRK+++  E  +EQ     +E      DV ++   KKAK T D               
Subjt:  MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLD--EPPDEQG---NQELPPPPPDVADKPPEKKAKLTGD---------------

Query:  -EPPPAVVVGASKQQEQEKPKPGDGSRSRGRRKNKPRKSS
         EP  A V G +K++E +  +P   SRSR RRK+KPRKSS
Subjt:  -EPPPAVVVGASKQQEQEKPKPGDGSRSRGRRKNKPRKSS

A0A5A7VIE6 Zinc finger and BTB domain-containing protein 473.8e-2668.85Show/hide
Query:  MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPP---PDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQE
        MGKKK  KTK IA AIAE STSK  +D  G GQS QPRKRGRPRKVLDE  +EQ N++LPPPP   P+V + PPEKK K T DEPPP  V   SKQ+E  
Subjt:  MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPP---PDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQE

Query:  KPKPGDGSRSRGRRKNKPRKSS
         PK GDGSRSRGRRKNKPRKSS
Subjt:  KPKPGDGSRSRGRRKNKPRKSS

A0A6J1KLK8 uncharacterized protein LOC1114963532.5e-3073.55Show/hide
Query:  MGKKKPHKTKHIAAAIAEASTSKSPEDAG--GGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEK
        MGKKK  KTK I+ AIAE STSK P+D G  GGGQS QPRKRGRPRKVLDEPPD++  + LPPP  DVADKP +KK K TGDEPP + + GASKQQE E+
Subjt:  MGKKKPHKTKHIAAAIAEASTSKSPEDAG--GGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEK

Query:  PKPGDGSRSRGRRKNKPRKSS
        PK GDGSRSRGRRKNKPRKSS
Subjt:  PKPGDGSRSRGRRKNKPRKSS

A0A6J5TRQ2 Uncharacterized protein5.3e-0436.17Show/hide
Query:  MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLD----------------------EPPDEQGNQELPPPPPDVADKPPEKKAKLT
        MGKKKP KTK ++ AIAEA ++          Q   PRKRGRPRK+++                      E  +EQ  +       D  +K  +++ K+ 
Subjt:  MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLD----------------------EPPDEQGNQELPPPPPDVADKPPEKKAKLT

Query:  GDEPPPAVVVGASKQQEQEKPKPGDGSRSRGRRKNKPRKSS
         +EP  A V G +K++E +  +P   SRSR RRK+KPRKSS
Subjt:  GDEPPPAVVVGASKQQEQEKPKPGDGSRSRGRRKNKPRKSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAAGAAAAAACCCCACAAAACCAAACACATAGCCGCCGCCATAGCCGAAGCTTCCACCTCTAAATCACCCGAAGATGCCGGCGGCGGCGGCCAATCAGCACAGCC
CAGAAAGAGGGGCCGCCCTCGGAAGGTTCTCGACGAGCCCCCGGACGAACAAGGGAATCAGGAACTGCCACCGCCGCCGCCGGATGTTGCTGATAAACCGCCGGAGAAGA
AGGCTAAACTCACCGGAGATGAGCCGCCGCCGGCTGTCGTGGTCGGAGCTTCGAAACAACAAGAACAAGAAAAACCCAAACCGGGAGACGGTTCGAGAAGCAGAGGAAGG
CGAAAGAACAAACCCAGAAAAAGTAGCTAA
mRNA sequenceShow/hide mRNA sequence
AAAATTCCCATCAGCCCATCAACTCATTGTCTCTTTTGCTTTCATCTTTCATAGGCCTCTTTTCCCTATCGCCTTCCTTTCACACCCCATTTTCTACTTACAAATTTCCA
CTCCATTTCTTCTTTTTTCTTTTTCTTTTTTTTTTTTTTTAATTCCATTCAACAATCTCTTCATTCACTGGGTATTGGAGCTCTCTGTGATTTCCTCTTTGATTATTTAT
TTGTTTGATGGGAAAGAAAAAACCCCACAAAACCAAACACATAGCCGCCGCCATAGCCGAAGCTTCCACCTCTAAATCACCCGAAGATGCCGGCGGCGGCGGCCAATCAG
CACAGCCCAGAAAGAGGGGCCGCCCTCGGAAGGTTCTCGACGAGCCCCCGGACGAACAAGGGAATCAGGAACTGCCACCGCCGCCGCCGGATGTTGCTGATAAACCGCCG
GAGAAGAAGGCTAAACTCACCGGAGATGAGCCGCCGCCGGCTGTCGTGGTCGGAGCTTCGAAACAACAAGAACAAGAAAAACCCAAACCGGGAGACGGTTCGAGAAGCAG
AGGAAGGCGAAAGAACAAACCCAGAAAAAGTAGCTAACCAACGGCTACGAAATGTCACAATGATATGTGGAGCCAACTTCTGGATGTATGGCACGTGAGTGTCACGTGTC
AATTATCAGCTACTACTAATTATGTTTTACTGCTGCATTGACCATGGATTTGGTGAACTTGATTGATGTGATGGGTTTAAAATAGTTGAAGAAGGAGCGTGGATTTCACC
CTGATTTTGGCGCGTGAGGAGGTCATGTTATGACCATTTGCCCAAGTGGTTCTTTATTTATTTATTTTGTTTTTCCTTAAAAACCATCCTAGGACCGAAAGGCATATTTG
ACTTTCATAAGGGGCTGTTTGTTTGACGTATATAGGTAAGATTTAAGTATATTGAAGAGTTATACTAAAAAATTTATTTAG
Protein sequenceShow/hide protein sequence
MGKKKPHKTKHIAAAIAEASTSKSPEDAGGGGQSAQPRKRGRPRKVLDEPPDEQGNQELPPPPPDVADKPPEKKAKLTGDEPPPAVVVGASKQQEQEKPKPGDGSRSRGR
RKNKPRKSS