CuGenDBv2

Gene ID	Sed0020219
Organism	Sechium edule (Chayote v1)
Description	Transmembrane protein
Genome location	LG11:2904752..2905399
RNA-Seq Expression	Sed0020219
Synteny	Sed0020219
Gene Ontology terms	GO:0016021 - integral component of membrane (cellular component)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

AAO45758.1 hypothetical protein [Cucumis melo subsp. melo]

4.0e-73

71.77

Show/hide

Query:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG
        NPLLNF +SNPI  PKSP +ST  A+      QT  ICARKKKR  GFQRSTKL L+LASLLA N+KILPPPLDLVVAELSGGDGNGGGSRLWR  G G 
Subjt:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG

Query:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR
         DGWRG RK  P F+GFL V G+ LLF+TDFEI+E+CG++GF+VFSVA IQL  K GISK F  GFGLF ILIALGLR  +VQKWV KLGFYSPKMKSLR
Subjt:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR

Query:  RKIKCKKIF
        RK+K ++IF
Subjt:  RKIKCKKIF

KAG7030256.1 hypothetical protein SDJN02_08603, partial [Cucurbita argyrosperma subsp. argyrosperma]

9.0e-73

71.29

Show/hide

Query:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG
        NPLLNF ISNP+I   S  LST  A+   F  QT IICARKK+RR  F RSTK+ L+LASLLA NLKILPPPLDLVVAELSGG+GNGGGSRLWRR GGGG
Subjt:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG

Query:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR
         DGWRG RK  P  +GFL + G+AL   TDFE+D ICG +GF++FSVA IQL  +SGISK F WGFGLF ILIALGLR  +VQKW GKLGFY PKMKSLR
Subjt:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR

Query:  RKIKCKKIF
        RKI+ KKIF
Subjt:  RKIKCKKIF

XP_008454859.1 PREDICTED: uncharacterized protein LOC103495165 [Cucumis melo]

4.8e-74

72.25

Show/hide

Query:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG
        NPLLNF +SNPI  PKSP +ST  A+      QT  ICARKKKR  GFQRSTKL L+LASLLA N+KILPPPLDLVVAELSGGDGNGGGSRLWR  GGG 
Subjt:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG

Query:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR
         DGWRG RK  P F+GFL V G+ LLF+TDFEI+E+CG++GF+VFSVA IQL  K GISK F  GFGLF ILIALGLR  +VQKWV KLGFYSPKMKSLR
Subjt:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR

Query:  RKIKCKKIF
        RK+K ++IF
Subjt:  RKIKCKKIF

XP_022999122.1 uncharacterized protein LOC111493602 isoform X2 [Cucurbita maxima]

9.9e-72

72.06

Show/hide

Query:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG
        NPLLNF ISNP+I   S  LST  A+   F  QT IICARKK+RR  F RSTKL L+LASL A NLKILPPPLDLVVAELSGGDGNGGGSRLWRR GGGG
Subjt:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG

Query:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR
         DGWRG RK  P  +GFL + G+AL   TDFE+D ICG +GF+VFSVA IQL  +SGISK F WGFGLF ILIALGLR  +VQKW GKLGFY PK+KSLR
Subjt:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR

Query:  RKIK
        RKIK
Subjt:  RKIK

XP_038886968.1 uncharacterized protein LOC120077138 [Benincasa hispida]

9.3e-78

74.16

Show/hide

Query:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG
        NPLLNF +SNPII P+SP LST  A+      QT IICARKKK+  GFQRSTKL L+LASLL  NLKILPPPLDLVV ELSGGDGNGGGSRLWR  GGGG
Subjt:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG

Query:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR
         DGWRG RK  P  +GFL V G+ LLF+TDFEID +CGV+GF++FSVA IQL LKSGISK F WGFGLF ILIALGLR  ++QKWVGKLG YSPKMKSLR
Subjt:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR

Query:  RKIKCKKIF
        RKI+ KKIF
Subjt:  RKIKCKKIF

TrEMBL top hits

e value

%identity

Alignment

A0A1S3C0R6 uncharacterized protein LOC103495165

2.3e-74

72.25

Show/hide

Query:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG
        NPLLNF +SNPI  PKSP +ST  A+      QT  ICARKKKR  GFQRSTKL L+LASLLA N+KILPPPLDLVVAELSGGDGNGGGSRLWR  GGG 
Subjt:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG

Query:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR
         DGWRG RK  P F+GFL V G+ LLF+TDFEI+E+CG++GF+VFSVA IQL  K GISK F  GFGLF ILIALGLR  +VQKWV KLGFYSPKMKSLR
Subjt:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR

Query:  RKIKCKKIF
        RK+K ++IF
Subjt:  RKIKCKKIF

A0A5D3D456 Uncharacterized protein

2.3e-74

72.25

Show/hide

Query:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG
        NPLLNF +SNPI  PKSP +ST  A+      QT  ICARKKKR  GFQRSTKL L+LASLLA N+KILPPPLDLVVAELSGGDGNGGGSRLWR  GGG 
Subjt:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG

Query:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR
         DGWRG RK  P F+GFL V G+ LLF+TDFEI+E+CG++GF+VFSVA IQL  K GISK F  GFGLF ILIALGLR  +VQKWV KLGFYSPKMKSLR
Subjt:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR

Query:  RKIKCKKIF
        RK+K ++IF
Subjt:  RKIKCKKIF

A0A6J1K9Z1 uncharacterized protein LOC111493602 isoform X2

4.8e-72

72.06

Show/hide

Query:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG
        NPLLNF ISNP+I   S  LST  A+   F  QT IICARKK+RR  F RSTKL L+LASL A NLKILPPPLDLVVAELSGGDGNGGGSRLWRR GGGG
Subjt:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG

Query:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR
         DGWRG RK  P  +GFL + G+AL   TDFE+D ICG +GF+VFSVA IQL  +SGISK F WGFGLF ILIALGLR  +VQKW GKLGFY PK+KSLR
Subjt:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR

Query:  RKIK
        RKIK
Subjt:  RKIK

A0A6J1KC74 uncharacterized protein LOC111493602 isoform X1

4.8e-72

72.06

Show/hide

Query:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG
        NPLLNF ISNP+I   S  LST  A+   F  QT IICARKK+RR  F RSTKL L+LASL A NLKILPPPLDLVVAELSGGDGNGGGSRLWRR GGGG
Subjt:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG

Query:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR
         DGWRG RK  P  +GFL + G+AL   TDFE+D ICG +GF+VFSVA IQL  +SGISK F WGFGLF ILIALGLR  +VQKW GKLGFY PK+KSLR
Subjt:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR

Query:  RKIK
        RKIK
Subjt:  RKIK

Q84KA4 Uncharacterized protein

1.9e-73

71.77

Show/hide

Query:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG
        NPLLNF +SNPI  PKSP +ST  A+      QT  ICARKKKR  GFQRSTKL L+LASLLA N+KILPPPLDLVVAELSGGDGNGGGSRLWR  G G 
Subjt:  NPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGG

Query:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR
         DGWRG RK  P F+GFL V G+ LLF+TDFEI+E+CG++GF+VFSVA IQL  K GISK F  GFGLF ILIALGLR  +VQKWV KLGFYSPKMKSLR
Subjt:  GDGWRGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLR

Query:  RKIKCKKIF
        RK+K ++IF
Subjt:  RKIKCKKIF

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G27440.1 unknown protein

5.3e-15

33.33

Show/hide

Query:  INLLNPLLNFAISNPIIKPK-SPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGS---RL
        ++L + L  F   NP    + S I    ++I H    Q+ ++CA+K+K+R G++R T+      SLLA NL+ILP PLDLV+A+L G DG GGG      
Subjt:  INLLNPLLNFAISNPIIKPK-SPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGS---RL

Query:  WRRLGGGGGDGWRGNRKIMPFFV---------GFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIAL
        WR  G G  DGWR  +  +P  V         GF  +SGI      + + + +  V+G  +F V  ++ L +    +  F  FG   ++ +L
Subjt:  WRRLGGGGGDGWRGNRKIMPFFV---------GFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIAL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGCACATCAATTTGTTGAACCCACTTCTCAATTTCGCCATTTCAAACCCCATAATCAAACCCAAATCACCAATCCTCTCGACCCACACAGCAATTTTCCACACATTTCC
AGTCCAAACACCGATCATTTGCGCCAGGAAGAAGAAGAGGCGTACTGGGTTTCAAAGATCAACCAAATTGGCGCTTCAATTGGCGTCCCTCTTAGCCGTCAATCTCAAGA
TCTTACCCCCGCCGCTGGATTTGGTCGTCGCGGAATTGAGCGGCGGAGATGGAAACGGTGGTGGCTCGCGGCTGTGGAGGAGACTCGGCGGAGGCGGCGGAGATGGATGG
AGAGGTAACAGGAAGATTATGCCATTTTTTGTTGGATTTTTGGCTGTGTCTGGTATTGCTTTGTTGTTTTTGACTGATTTTGAGATCGATGAGATTTGTGGAGTTGTTGG
TTTTTCTGTATTTAGTGTTGCATTCATTCAGTTGTTGCTGAAAAGTGGTATTTCGAAGGGTTTCTTTTGGGGATTTGGCCTTTTTGCCATTTTAATTGCCCTTGGATTGA
GAGAATTTGATGTGCAAAAATGGGTTGGAAAATTGGGGTTTTACAGTCCAAAGATGAAGAGTTTAAGAAGGAAAATTAAATGTAAGAAGATTTTCTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MHINLLNPLLNFAISNPIIKPKSPILSTHTAIFHTFPVQTPIICARKKKRRTGFQRSTKLALQLASLLAVNLKILPPPLDLVVAELSGGDGNGGGSRLWRRLGGGGGDGW
RGNRKIMPFFVGFLAVSGIALLFLTDFEIDEICGVVGFSVFSVAFIQLLLKSGISKGFFWGFGLFAILIALGLREFDVQKWVGKLGFYSPKMKSLRRKIKCKKIF

Sed0020219 (gene) of Chayote v1 genome