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Sed0020247 (gene) of Chayote v1 genome

Gene IDSed0020247
OrganismSechium edule (Chayote v1)
DescriptionEF-hand domain-containing protein
Genome locationLG12:1611546..1616477
RNA-Seq ExpressionSed0020247
SyntenySed0020247
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
GO:0048306 - calcium-dependent protein binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582540.1 hypothetical protein SDJN03_22542, partial [Cucurbita argyrosperma subsp. sororia]3.3e-5470.24Show/hide
Query:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL
        M +ALGRFG  GKEWRD +LR ISDRIF+ + ++  KDKLSFEDLYIATLLVYND+NK LP  HLDPPT+ER RELI+++D ++D++I R+EF+ FILSL
Subjt:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL

Query:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQPLLK
        TSD F+S+S +L+LTLV+AP VA+VTK+STEGIP VG LVQKLP+SAYAFLVTLAA +FQNSQ+P+LK
Subjt:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQPLLK

XP_022146952.1 uncharacterized protein LOC111016024 [Momordica charantia]3.5e-5673.17Show/hide
Query:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL
        MGQ L + G  GK+WRD ++RKISD+IFNK+KN S K  LSFEDLYIATLLVYN++NK LPGPH DPP+KERVRELI++SD + D+EIDREEF+ FIL L
Subjt:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL

Query:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQ
        TSDT ++VSQ LVLTLVVAP VA+VTKKSTEG+PGVGKLVQKLP S YA L+TLAAL FQN+ Q
Subjt:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQ

XP_023528258.1 uncharacterized protein LOC111791228 [Cucurbita pepo subsp. pepo]3.3e-5470.24Show/hide
Query:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL
        M +ALGRFG  GKEWRD +LR ISDRIF+ + ++  KDKLSFEDLYIATLLVYND+NK LP  HLDPPT+ER RELI+++D ++D++I R+EF+ FILSL
Subjt:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL

Query:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQPLLK
        TSD F+S+S +L+LTLV+AP VA+VTK+STEGIP VG LVQKLP+SAYAFLVTLAA +FQNSQ+P+LK
Subjt:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQPLLK

XP_038876686.1 uncharacterized protein LOC120069050 [Benincasa hispida]9.5e-7083.93Show/hide
Query:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL
        MGQ+LGRFG  GKEWRD +LRKIS++IF+K KNQSH+DKLSFEDLYIATLLVYND+NK +PGPHLDPPTKERV+ELI+DSDRD DREIDREEF++FILSL
Subjt:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL

Query:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQPLLK
        TSDTFVSVSQ+L+LTLVVAP VA+VTKKSTEG+PG+GK VQKLP SAYAFLVTLAALMFQNSQQ LLK
Subjt:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQPLLK

XP_038892374.1 uncharacterized protein LOC120081499 [Benincasa hispida]5.1e-5572.83Show/hide
Query:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPT----KERVRELIEDSDRDRDREIDREEFVNF
        MGQAL  FG  GKEWRD +LRKI+DRIF+K + Q+H DKL  EDLYIATLLVYN++NKL+PGPH DPPT    KERV+ELI+ SD + D+ IDR EF++F
Subjt:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPT----KERVRELIEDSDRDRDREIDREEFVNF

Query:  ILSLTSDTFVSVSQKL-VLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQPLLK
        ILSLTS+TF SVSQ+L +LTLVVAP VA+VTKKSTE IPGVGKLVQKLP SAYAFLVTLAAL+FQ SQQ LL+
Subjt:  ILSLTSDTFVSVSQKL-VLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQPLLK

TrEMBL top hitse value%identityAlignment
A0A5A7U485 EF-hand domain-containing protein8.2e-5164.88Show/hide
Query:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL
        MGQAL RFG  G++W++ +L  IS++IF++     HK+KLSFEDLYIATLLV+ND+NK LPGPH+DPPTKERV EL+E SD + ++ IDR+EF+ FI  L
Subjt:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL

Query:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQPLLK
        T ++  SVSQ+L++TLVVAP +A+VTK+STEGIPG+GK+VQK+P+SAYA LVTLAAL+FQNS Q LLK
Subjt:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQPLLK

A0A6J1D109 uncharacterized protein LOC1110160241.7e-5673.17Show/hide
Query:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL
        MGQ L + G  GK+WRD ++RKISD+IFNK+KN S K  LSFEDLYIATLLVYN++NK LPGPH DPP+KERVRELI++SD + D+EIDREEF+ FIL L
Subjt:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL

Query:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQ
        TSDT ++VSQ LVLTLVVAP VA+VTKKSTEG+PGVGKLVQKLP S YA L+TLAAL FQN+ Q
Subjt:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQ

A0A6J1EC16 uncharacterized protein LOC1114318342.1e-5469.64Show/hide
Query:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL
        M +ALGRFG  GKEWRD +LR ISDRIF+ + ++  KDKLSFEDLYIATLLVYND+NK LP  HLDPPT+ER RELI+++D ++D++I R+EF+ FILSL
Subjt:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL

Query:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQPLLK
        TSD F+S+S +L+LTLV+AP VA+VTK+STEGIP +G LVQKLP+SAYAFLVTLAA +FQNSQ+P+LK
Subjt:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQPLLK

A0A6J1IGT6 uncharacterized protein LOC1114727544.8e-5164.29Show/hide
Query:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL
        MGQ LGRFG  GK+WR  +L+ IS+RIF+K+K QS K++LSFE+LYIATLLV+ND+NKLL G H DPP++E  ++LI   D +++ +ID EEF  F++ L
Subjt:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL

Query:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQPLLK
        TS+TF SVSQKLVLTLV+AP +A+ TKK TEG PGVGKLVQKLP+SAYA ++TLAA++FQ+S QPLLK
Subjt:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQPLLK

A0A6J1ITL1 uncharacterized protein LOC1114798031.0e-5369.05Show/hide
Query:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL
        M +ALGRFG  GKEWRD +LR ISDRIF+ + ++  KDKLSFEDLYIATLLVYND+NK LP  HLDPPT+ER R+L++++D + D++I R+EF+ FILSL
Subjt:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL

Query:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQPLLK
        TSD F+S+S +L+LTLV+AP VA+VTK+STEGIP VG LVQKLP+SAYAFLVTLAA +FQNSQ+P+LK
Subjt:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQPLLK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G64850.1 Calcium-binding EF hand family protein1.6e-4356.17Show/hide
Query:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL
        MGQ   +  + GKEWR  +++ I DR+F++ K Q+ +  L+FE+LYIA LLVYND+NK LPGPH DPP+K+ V  ++ D D + D E+DREEFV FI  +
Subjt:  MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSL

Query:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNS
        T++TF  VSQ L++ L+VAP VA+ TKK+TEG+PGVGK+VQKLP S YA LVTL A+M+ NS
Subjt:  TSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNS

AT4G37445.1 BEST Arabidopsis thaliana protein match is: Calcium-binding EF hand family protein (TAIR:AT1G64850.1)1.9e-0725.42Show/hide
Query:  SFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSLTSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLV
        +F+D ++A L ++N+ N  LPG H D PT ++++         +D E  ++ F+ F+      +   +    ++T +V+P  A+  K++ E +P + KL+
Subjt:  SFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSLTSDTFVSVSQKLVLTLVVAPAVALVTKKSTEGIPGVGKLV

Query:  QKLPNSAYAFLVTLAALM
        + +P+  +   VT+ A++
Subjt:  QKLPNSAYAFLVTLAALM


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGACAAGCACTGGGGAGATTTGGAGTTGCAGGCAAAGAATGGAGGGATGGGCGATTGAGGAAGATATCAGACAGGATATTTAATAAGGTTAAAAATCAATCACATAA
GGATAAGCTGTCATTTGAAGATCTGTATATCGCTACCTTACTTGTGTACAATGACATGAATAAGCTGTTGCCCGGCCCGCATCTTGATCCTCCCACAAAGGAACGTGTCA
GAGAACTCATAGAGGACAGCGATAGGGACCGGGACCGAGAAATCGATCGAGAAGAATTTGTGAATTTTATACTGAGCTTGACGTCTGACACGTTCGTGTCAGTGAGCCAG
AAATTGGTGCTCACTTTGGTGGTTGCACCAGCAGTGGCATTGGTCACAAAGAAAAGTACCGAAGGCATTCCAGGCGTTGGAAAATTGGTGCAAAAACTCCCCAATTCAGC
ATATGCTTTCCTTGTCACTCTAGCCGCTCTTATGTTTCAGAACTCTCAGCAGCCGCTTCTTAAACCATAA
mRNA sequenceShow/hide mRNA sequence
AAAAGAAAAATCTCCGATTGATTATTGTATTTTCTTCATATTTTGGGACAGAACCAACGGTATAATTTTGCATTTAAAGGAAATCACAGGTCGCTTTATTCAAAGGTTCC
TTTCGAAATGTGTGGCAGAAGCCTGTATGAACTTTATCATTTTGTTTAAATACAAAACCTCAGAAAATGACAAATTTCGTTATCGTTGCTGTTACGGCGTACATTTCAAC
CATCCCTAACCCTAAGAACCGATTTCAACGACAATCGACGGCGGCTTTGCAAGGCCTGTGATCTTCCATCGCCGTCGCTGCCGTCCAGTATGGGACAAGCACTGGGGAGA
TTTGGAGTTGCAGGCAAAGAATGGAGGGATGGGCGATTGAGGAAGATATCAGACAGGATATTTAATAAGGTTAAAAATCAATCACATAAGGATAAGCTGTCATTTGAAGA
TCTGTATATCGCTACCTTACTTGTGTACAATGACATGAATAAGCTGTTGCCCGGCCCGCATCTTGATCCTCCCACAAAGGAACGTGTCAGAGAACTCATAGAGGACAGCG
ATAGGGACCGGGACCGAGAAATCGATCGAGAAGAATTTGTGAATTTTATACTGAGCTTGACGTCTGACACGTTCGTGTCAGTGAGCCAGAAATTGGTGCTCACTTTGGTG
GTTGCACCAGCAGTGGCATTGGTCACAAAGAAAAGTACCGAAGGCATTCCAGGCGTTGGAAAATTGGTGCAAAAACTCCCCAATTCAGCATATGCTTTCCTTGTCACTCT
AGCCGCTCTTATGTTTCAGAACTCTCAGCAGCCGCTTCTTAAACCATAAGTTTAGAACTCTGTTTGCTGTGTGTTTGTTTCTATGGATGTTTGTCCTTTTACAACTTTCA
GTCCTTAAACCGTTATGTTTTATACCTAATAGAATCTCGGAAAGGTTAAAATATTATTTTGATTATAGACTTTGAAGTTTATGTTATTTTGTCTTCTGCATTTCAAATGT
TCAA
Protein sequenceShow/hide protein sequence
MGQALGRFGVAGKEWRDGRLRKISDRIFNKVKNQSHKDKLSFEDLYIATLLVYNDMNKLLPGPHLDPPTKERVRELIEDSDRDRDREIDREEFVNFILSLTSDTFVSVSQ
KLVLTLVVAPAVALVTKKSTEGIPGVGKLVQKLPNSAYAFLVTLAALMFQNSQQPLLKP