CuGenDBv2

Gene ID	Sed0020270
Organism	Sechium edule (Chayote v1)
Description	60S ribosomal protein L37a
Genome location	LG12:2095498..2097979
RNA-Seq Expression	Sed0020270
Synteny	Sed0020270
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0022626 - cytosolic ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function)
InterPro domains	IPR002674 - Ribosomal protein L37ae IPR011331 - Ribosomal protein L37ae/L37e IPR011332 - Zinc-binding ribosomal protein

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAB2622800.1 hypothetical protein D8674_024982 [Pyrus ussuriensis x Pyrus communis]

5.4e-43

98.91

Show/hide

Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

KAF5472371.1 hypothetical protein F2P56_009094, partial [Juglans regia]

2.4e-43

100

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Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

XP_015869321.1 60S ribosomal protein L37a-1 [Ziziphus jujuba]

5.4e-43

98.91

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Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRK+VGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

XP_018854860.1 60S ribosomal protein L37a-1 [Juglans regia]

2.4e-43

100

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Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

XP_023888600.1 60S ribosomal protein L37a-1 [Quercus suber]

5.4e-43

98.91

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Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLR+QTES
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

TrEMBL top hits

e value

%identity

Alignment

A0A1U7XSD1 60S ribosomal protein L37a

2.6e-43

98.91

Show/hide

Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

A0A1U8LTA9 60S ribosomal protein L37a

2.6e-43

98.91

Show/hide

Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

A0A2I4HFC6 60S ribosomal protein L37a-1

1.2e-43

100

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Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

A0A6J1ICH2 60S ribosomal protein L37a

2.6e-43

98.91

Show/hide

Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

K4CND1 Uncharacterized protein

2.6e-43

98.91

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Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

SwissProt top hits

e value

%identity

Alignment

P0DKK1 60S ribosomal protein L37a-1

1.2e-45

97.83

Show/hide

Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

P0DKK2 60S ribosomal protein L37a-2

1.2e-45

97.83

Show/hide

Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTE+
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9SRK6 Putative 60S ribosomal protein L37a-1

1.5e-43

93.48

Show/hide

Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        MTKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGK++VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9XHE4 60S ribosomal protein L37a

6.0e-45

97.83

Show/hide

Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGK+AVKRKAVGIWGCK CGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Q9ZRS8 60S ribosomal protein L37a

7.8e-45

97.8

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Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSK+FCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNT SAVTVRSTIRRLREQTE
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE

Arabidopsis top hits

e value

%identity

Alignment

AT3G10950.1 Zinc-binding ribosomal protein family protein

1.0e-44

93.48

Show/hide

Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES
        MTKRTKKA IVGKYGTRYGASLRKQIKKMEVSQH+KYFCEFCGK++VKRK VGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQTES
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

AT3G60245.1 Zinc-binding ribosomal protein family protein

5.2e-44

92.31

Show/hide

Query:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE
        M KRTKK GIVGKYGTRYGAS+RKQIKKMEVSQHSKYFCEFCGK+ VKRKAVGIWGCKDCGKVKAGGAYT+NTASAVTVRSTIRRLREQ E
Subjt:  MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTE

Sequences

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CDS sequence

Show/hide CDS sequence

ATGACGAAGAGAACCAAGAAGGCTGGAATTGTGGGCAAATACGGTACCAGATATGGTGCTAGTTTGAGGAAGCAGATAAAAAAGATGGAAGTCAGTCAGCACAGCAAATA
CTTCTGTGAATTTTGCGGAAAGTTTGCGGTGAAAAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGTGGAAAGGTGAAAGCCGGAGGTGCCTACACATTGAACACTG
CAAGTGCTGTGACAGTGAGGAGCACAATTCGAAGGTTGAGGGAGCAGACTGAGAGTTAA

mRNA sequence

Show/hide mRNA sequence

GGGTTATATAAACAGCCAGAGATTTCTAGGGTTTTCCCGTTTGGCCGTTCAGTCTCTGCTCTTCGCTTGCGTCTCTTTGCTTCCGAGCTTCAACAATGACGAAGAGAACC
AAGAAGGCTGGAATTGTGGGCAAATACGGTACCAGATATGGTGCTAGTTTGAGGAAGCAGATAAAAAAGATGGAAGTCAGTCAGCACAGCAAATACTTCTGTGAATTTTG
CGGAAAGTTTGCGGTGAAAAGGAAGGCTGTTGGGATATGGGGTTGCAAGGACTGTGGAAAGGTGAAAGCCGGAGGTGCCTACACATTGAACACTGCAAGTGCTGTGACAG
TGAGGAGCACAATTCGAAGGTTGAGGGAGCAGACTGAGAGTTAAGTTCGGTTTAGATTACGTTTTCTTTTCTCAGAGTTATTACGAGTTTGATAGTGTAGATCTTCTTTT
TTGGAAGAAGATTGTTGAAGCAATTTGAGAACCCATTTATCATTTCAAGTTGAGACGCCAGAACCTTTTAAAATAGCTCTGCTTTTAGCCATTTTAATTATAGCTTGAAT
TCTTAACATTAGAGTCTTTGCTAGCTGCTGCAACAAGTCTCCTTTTTCTAGTTCAATTTGTCAGATGTGATGTGAAAACTGAGATATGCCTGCAGTGAGATAACCTTAAA
ATGGATTAGGGGAAGGTAATTATTTACAAGGGCTAGCTAGCTCCATTGTTTTACCTTCACCAGGGAAAACGAGCATAAAAAGGTTAAGCATATTTAGGTAAACATGGTAC
TACATTCTATTTACACATACATGAGGAAGAGTGGCC

Protein sequence

Show/hide protein sequence

MTKRTKKAGIVGKYGTRYGASLRKQIKKMEVSQHSKYFCEFCGKFAVKRKAVGIWGCKDCGKVKAGGAYTLNTASAVTVRSTIRRLREQTES

Sed0020270 (gene) of Chayote v1 genome