; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020299 (gene) of Chayote v1 genome

Gene IDSed0020299
OrganismSechium edule (Chayote v1)
DescriptionRING-type domain-containing protein
Genome locationLG08:4438359..4441554
RNA-Seq ExpressionSed0020299
SyntenySed0020299
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR001841 - Zinc finger, RING-type
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6589815.1 hypothetical protein SDJN03_15238, partial [Cucurbita argyrosperma subsp. sororia]1.1e-8278.24Show/hide
Query:  MAKRKRGSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHRD
        M K K GSDQ   DRP HLSG+VPF+NQM+VRSEEDR L RP+F+KRSRHQYSHQYCRRGSTSQ NASTSREN+VRT+LE+RPAFKFAAHCNSEFP H +
Subjt:  MAKRKRGSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHRD

Query:  GNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEPP
         N+ TF  PERIRY NSLGKD +SSHG +++CGICQK+M+RKLCF  N LSSSELPVAAVLVCGHVYHADCLEN S+VEDRSDP CPLC EPP
Subjt:  GNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEPP

XP_022134599.1 uncharacterized protein LOC111006826 [Momordica charantia]9.3e-8581.35Show/hide
Query:  MAKRKR-GSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHR
        M KRKR  SD   PD PLHLSGVVPF+NQM+V SEED+ L RPVF+KRSRHQYSHQYCRRGSTSQ NASTSREN+VRT+LEERPAFKFAAHCNSEFP H 
Subjt:  MAKRKR-GSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHR

Query:  DGNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEP
        +  + TFWGPERIRY +SLGKDA+SSHG+RMLCGICQK+M+RKLCF  N LSSSELPVAAVLVCGHVYHADCLE RS VEDRSDPPCPLC+EP
Subjt:  DGNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEP

XP_022961020.1 uncharacterized protein LOC111461650 isoform X2 [Cucurbita moschata]8.7e-8377.72Show/hide
Query:  MAKRKRGSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHRD
        M KRK GSDQ   DRP HLSG+VPF+NQM+VRSEEDR L RP+F+KRSRHQYSHQYCRRGSTS+ NASTSREN+VRT+LE+RPAFKFAAHCNSEFP H +
Subjt:  MAKRKRGSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHRD

Query:  GNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEPP
         N+ TF  PERIRY NSLGKD +SSHG +++CGICQK+M+RKLCF  N LSSSELP+AAVLVCGHVYHADCLEN S+VEDRSDP CPLC EPP
Subjt:  GNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEPP

XP_038878631.1 uncharacterized protein LOC120070818 isoform X1 [Benincasa hispida]3.5e-8480.41Show/hide
Query:  MAKRKRGSDQPFPDRPLHLSGVVPFANQMEVRSEE-DRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHR
        M KRKRGSDQ   D PLHLSG+VPF+NQM+VRSEE DR   RPVF+KRSRHQYSHQYCRRGSTS  NAS SREN+V+T+LEERPAFKFAAHCNSEFP H 
Subjt:  MAKRKRGSDQPFPDRPLHLSGVVPFANQMEVRSEE-DRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHR

Query:  DGNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEPP
        +  + TFWGPERIRY NS GKDA SSHGMRM+CGICQK+M+RKLCF  N LSSSELPVAAVLVCGHVYHA+CLENRS+VEDRSDPPCPLC EPP
Subjt:  DGNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEPP

XP_038878632.1 uncharacterized protein LOC120070818 isoform X2 [Benincasa hispida]1.4e-8580.83Show/hide
Query:  MAKRKRGSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHRD
        M KRKRGSDQ   D PLHLSG+VPF+NQM+VRSEEDR   RPVF+KRSRHQYSHQYCRRGSTS  NAS SREN+V+T+LEERPAFKFAAHCNSEFP H +
Subjt:  MAKRKRGSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHRD

Query:  GNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEPP
          + TFWGPERIRY NS GKDA SSHGMRM+CGICQK+M+RKLCF  N LSSSELPVAAVLVCGHVYHA+CLENRS+VEDRSDPPCPLC EPP
Subjt:  GNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEPP

TrEMBL top hitse value%identityAlignment
A0A1S3B956 uncharacterized protein LOC103487402 isoform X23.6e-8278.76Show/hide
Query:  MAKRKRGSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHRD
        M KRKRGSDQ   D PLHLSG+VPF+NQ +VRSEED  L RP+F+KRSRH YSHQYCRRGSTSQ NASTSREN+VRT+LEERPAFKFAAHCNSEFP   +
Subjt:  MAKRKRGSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHRD

Query:  GNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEPP
          + TF GPERIRY NSLGKDA+SSH MRM+CGICQK+M+RKLCF  N LSSSELPVAAVLVCGHVYHA+CLENRS VEDRSDPPCPLC++ P
Subjt:  GNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEPP

A0A5A7U906 RING-type domain-containing protein3.6e-8278.76Show/hide
Query:  MAKRKRGSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHRD
        M KRKRGSDQ   D PLHLSG+VPF+NQ +VRSEED  L RP+F+KRSRH YSHQYCRRGSTSQ NASTSREN+VRT+LEERPAFKFAAHCNSEFP   +
Subjt:  MAKRKRGSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHRD

Query:  GNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEPP
          + TF GPERIRY NSLGKDA+SSH MRM+CGICQK+M+RKLCF  N LSSSELPVAAVLVCGHVYHA+CLENRS VEDRSDPPCPLC++ P
Subjt:  GNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEPP

A0A6J1BZ68 uncharacterized protein LOC1110068264.5e-8581.35Show/hide
Query:  MAKRKR-GSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHR
        M KRKR  SD   PD PLHLSGVVPF+NQM+V SEED+ L RPVF+KRSRHQYSHQYCRRGSTSQ NASTSREN+VRT+LEERPAFKFAAHCNSEFP H 
Subjt:  MAKRKR-GSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHR

Query:  DGNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEP
        +  + TFWGPERIRY +SLGKDA+SSHG+RMLCGICQK+M+RKLCF  N LSSSELPVAAVLVCGHVYHADCLE RS VEDRSDPPCPLC+EP
Subjt:  DGNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEP

A0A6J1HAS2 uncharacterized protein LOC111461650 isoform X24.2e-8377.72Show/hide
Query:  MAKRKRGSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHRD
        M KRK GSDQ   DRP HLSG+VPF+NQM+VRSEEDR L RP+F+KRSRHQYSHQYCRRGSTS+ NASTSREN+VRT+LE+RPAFKFAAHCNSEFP H +
Subjt:  MAKRKRGSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHRD

Query:  GNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEPP
         N+ TF  PERIRY NSLGKD +SSHG +++CGICQK+M+RKLCF  N LSSSELP+AAVLVCGHVYHADCLEN S+VEDRSDP CPLC EPP
Subjt:  GNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEPP

A0A6J1JKN5 uncharacterized protein LOC111485281 isoform X21.6e-8277.72Show/hide
Query:  MAKRKRGSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHRD
        M KRK GSDQ   DRP HLSG+VPF+NQM+VRSEEDR L RP+F+KRSRHQYSHQYCRRGSTSQ NASTSREN+VRT+LE+RP FKFAAHCNSEFP H +
Subjt:  MAKRKRGSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHRD

Query:  GNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEPP
         N+ TF  PERIRYN+S GKD +SSHG +++CGICQK+M+RKLCF  N LSSSELPVAAVLVCGHVYHADCLEN S+VEDRSDP CPLC EPP
Subjt:  GNKGTFWGPERIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEPP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G39140.1 RING/U-box superfamily protein1.9e-1138.75Show/hide
Query:  LGKDAVSSHGMRM------LCGICQKMMKRKLCFHS-NMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCS
        L +D +  HG RM       CG C + +  K  + S  +  ++EL V+A+L CGHVYH +CLE  +   D+ DP CP+C+
Subjt:  LGKDAVSSHGMRM------LCGICQKMMKRKLCFHS-NMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCS

AT4G39140.2 RING/U-box superfamily protein1.9e-1138.75Show/hide
Query:  LGKDAVSSHGMRM------LCGICQKMMKRKLCFHS-NMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCS
        L +D +  HG RM       CG C + +  K  + S  +  ++EL V+A+L CGHVYH +CLE  +   D+ DP CP+C+
Subjt:  LGKDAVSSHGMRM------LCGICQKMMKRKLCFHS-NMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCS

AT4G39140.3 RING/U-box superfamily protein1.9e-1138.75Show/hide
Query:  LGKDAVSSHGMRM------LCGICQKMMKRKLCFHS-NMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCS
        L +D +  HG RM       CG C + +  K  + S  +  ++EL V+A+L CGHVYH +CLE  +   D+ DP CP+C+
Subjt:  LGKDAVSSHGMRM------LCGICQKMMKRKLCFHS-NMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCS

AT4G39140.4 RING/U-box superfamily protein1.9e-1138.75Show/hide
Query:  LGKDAVSSHGMRM------LCGICQKMMKRKLCFHS-NMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCS
        L +D +  HG RM       CG C + +  K  + S  +  ++EL V+A+L CGHVYH +CLE  +   D+ DP CP+C+
Subjt:  LGKDAVSSHGMRM------LCGICQKMMKRKLCFHS-NMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCS

AT4G39140.5 RING/U-box superfamily protein1.9e-1138.75Show/hide
Query:  LGKDAVSSHGMRM------LCGICQKMMKRKLCFHS-NMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCS
        L +D +  HG RM       CG C + +  K  + S  +  ++EL V+A+L CGHVYH +CLE  +   D+ DP CP+C+
Subjt:  LGKDAVSSHGMRM------LCGICQKMMKRKLCFHS-NMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAAAGCGCAAGCGAGGCTCTGATCAGCCCTTCCCTGATCGCCCTCTTCATCTCTCTGGTGTAGTGCCTTTTGCCAATCAAATGGAAGTGCGGTCGGAAGAGGATCG
GGGTCTTGTCCGTCCTGTATTCTTGAAACGTTCACGTCATCAGTATAGTCATCAATATTGTCGGCGAGGTTCAACTAGTCAACCTAATGCATCAACCTCCCGAGAAAACC
AAGTCAGGACTATGCTTGAGGAGCGACCTGCCTTTAAATTTGCTGCTCATTGCAACTCAGAGTTTCCAGTCCATAGAGATGGCAATAAGGGCACCTTCTGGGGGCCAGAA
AGGATAAGGTACAACAATTCCTTAGGGAAGGATGCAGTTTCATCTCATGGAATGAGAATGCTATGTGGGATTTGTCAGAAGATGATGAAACGAAAGCTTTGCTTTCACAG
CAACATGCTTTCTTCCAGCGAACTTCCCGTTGCTGCGGTTTTGGTTTGTGGCCATGTCTATCATGCAGACTGTCTGGAGAACAGGTCGGATGTCGAAGATAGAAGCGATC
CACCTTGTCCATTGTGCTCGGAACCGCCTATCAACGACTGA
mRNA sequenceShow/hide mRNA sequence
TGGGACAAGAACTCGAATAAAAACACACACACACACACAACAAACATTTATTTCTTTTTTTTTTCTTCTTTTTTCTTCGGGTGATTTCCTTAAAACTGTAAATCATCATC
ATCATCATCAACACCGACCTCATCCACCGGCTTCTGTGTTTCTATTTCAATTCAATTTCCCATGTTCACAGCCACAGAAATCACTGCCTAAATTTAACCCCCTAATTACA
TTCATCCCTTTCCTTTAATTTCAATCTTAATTTCTATGGCAAAGCGCAAGCGAGGCTCTGATCAGCCCTTCCCTGATCGCCCTCTTCATCTCTCTGGTGTAGTGCCTTTT
GCCAATCAAATGGAAGTGCGGTCGGAAGAGGATCGGGGTCTTGTCCGTCCTGTATTCTTGAAACGTTCACGTCATCAGTATAGTCATCAATATTGTCGGCGAGGTTCAAC
TAGTCAACCTAATGCATCAACCTCCCGAGAAAACCAAGTCAGGACTATGCTTGAGGAGCGACCTGCCTTTAAATTTGCTGCTCATTGCAACTCAGAGTTTCCAGTCCATA
GAGATGGCAATAAGGGCACCTTCTGGGGGCCAGAAAGGATAAGGTACAACAATTCCTTAGGGAAGGATGCAGTTTCATCTCATGGAATGAGAATGCTATGTGGGATTTGT
CAGAAGATGATGAAACGAAAGCTTTGCTTTCACAGCAACATGCTTTCTTCCAGCGAACTTCCCGTTGCTGCGGTTTTGGTTTGTGGCCATGTCTATCATGCAGACTGTCT
GGAGAACAGGTCGGATGTCGAAGATAGAAGCGATCCACCTTGTCCATTGTGCTCGGAACCGCCTATCAACGACTGAAAAGGAGAGGAGGAGGAATGAGGAGTTGAGTTGT
ACATATGTTATCAGATCACACCAACAATAGGAATTAAGCCTTGGCTTGAATGGGCAGAGCTAGAAGCTGGAGTTTTTGCATCCTCTACTATTTTTCAATGAACTAATCTT
TTTCTGGATGGTTGTGATTTTGAAGACGAAAACGGTCGCGATAAATCACAGACGTACAAAACATAGCGATAGCAAGTCGAAAAATAGTGAGGATTTGTGCTCCATAGAAC
TAGACTGACAACTGCAAGTCCTTTGTTACCTTTTGGATTTTTCTTATTTAGCAACATAGGAATTTAGTGAGACATCCTCCTTTGATTATGTACTTTTCTAGAGCAATGCC
TAAAAGACAAAAACTGTATATTTTAGTAAGTACTGAATGTAAGTAAAATTATCATGAAAGTAGATTTTTCTTTTTAAAAAAT
Protein sequenceShow/hide protein sequence
MAKRKRGSDQPFPDRPLHLSGVVPFANQMEVRSEEDRGLVRPVFLKRSRHQYSHQYCRRGSTSQPNASTSRENQVRTMLEERPAFKFAAHCNSEFPVHRDGNKGTFWGPE
RIRYNNSLGKDAVSSHGMRMLCGICQKMMKRKLCFHSNMLSSSELPVAAVLVCGHVYHADCLENRSDVEDRSDPPCPLCSEPPIND