; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020309 (gene) of Chayote v1 genome

Gene IDSed0020309
OrganismSechium edule (Chayote v1)
Descriptionzinc finger CCCH domain-containing protein 54
Genome locationLG13:1917940..1918891
RNA-Seq ExpressionSed0020309
SyntenySed0020309
Gene Ontology termsGO:0008152 - metabolic process (biological process)
GO:0050789 - regulation of biological process (biological process)
GO:0005634 - nucleus (cellular component)
GO:0031490 - chromatin DNA binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR000571 - Zinc finger, CCCH-type
IPR036855 - Zinc finger, CCCH-type superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN53171.2 hypothetical protein Csa_015342 [Cucumis sativus]1.1e-7467.44Show/hide
Query:  GFIFGINDVYGQDFSAVSPP--------EQIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGD
        GF+FGINDVYG +FS VS P        E+ D T A+FSSDEFRM++YKIQRCPR  SHDWTECPYAHRGEKAQRRDPR+FNYTAVACPAFR+GSCPKGD
Subjt:  GFIFGINDVYGQDFSAVSPP--------EQIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGD

Query:  FCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSR----------PPRAAAAGGEATPARRNGGGRE----IGLIEVS
        FCEFAHGVFEYWLHP RYRTR+CNAGRFC+RKVCFFAHSP++LRPE+KQK   +  +          PP     G    PAR +G GR+     GL +V+
Subjt:  FCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSR----------PPRAAAAGGEATPARRNGGGRE----IGLIEVS

Query:  DLELPDIEWISELLK
        +LELP IEWISELLK
Subjt:  DLELPDIEWISELLK

XP_008454474.1 PREDICTED: zinc finger CCCH domain-containing protein 54 [Cucumis melo]3.1e-8070.18Show/hide
Query:  MFQGFIFGINDVYGQDFSAVSPP--------EQIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCP
        MFQGF+FGINDVYG +FSAVS P        E++D T A+FS+DEFRM++YKIQRCPR  SHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFR+GSCP
Subjt:  MFQGFIFGINDVYGQDFSAVSPP--------EQIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCP

Query:  KGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSR----------PPRAAAAGGEATPARRNGGGRE----IGLI
        KGDFCEFAHGVFEYWLHP RYRTR+CNAGRFC+RKVCFFAHSP++LRPE+K K  LN  R          PP     G    PAR NGGGR+     G  
Subjt:  KGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSR----------PPRAAAAGGEATPARRNGGGRE----IGLI

Query:  EVSDLELPDIEWISELLK
        +VS+LELP IEWISELLK
Subjt:  EVSDLELPDIEWISELLK

XP_022922815.1 zinc finger CCCH domain-containing protein 54 [Cucurbita moschata]7.4e-7465.45Show/hide
Query:  MFQGFIFGINDVYGQDFSAVSPPE----------QIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGS
        M QGF+FGINDVYG +F+AV+ PE          Q D T A+F+SDEFRM+A+KIQRCP++ SHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFRTGS
Subjt:  MFQGFIFGINDVYGQDFSAVSPPE----------QIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGS

Query:  CPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSRPPRAAAAGGEATPARRNGGGREIGLIEVSD--------
        CPKGDFCEFAHGVFE+WLHP RYRTR+CNAGRFC+RKVCFFAHSP++LRPE+K KL  + +   RAA A  E    R+N G  EI + E+SD        
Subjt:  CPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSRPPRAAAAGGEATPARRNGGGREIGLIEVSD--------

Query:  ------LELPDIEWISELLK
               ELP IEWISELL+
Subjt:  ------LELPDIEWISELLK

XP_023553083.1 zinc finger CCCH domain-containing protein 54 [Cucurbita pepo subsp. pepo]2.1e-7365Show/hide
Query:  MFQGFIFGINDVYGQDFSAVSPPE----------QIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGS
        M QGF+FGINDVYG +F+AV+ PE          Q D T A+F+SDEFRM+A+KIQRCP++ SHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFRTGS
Subjt:  MFQGFIFGINDVYGQDFSAVSPPE----------QIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGS

Query:  CPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSRPPRAAAAGGEATPARRNGGGREIGLIEVSD--------
        CPKGDFCEFAHGVFE+WLHP RYRTR+CNAGRFC+RKVCFFAHSP++LRPE+K KL  + +   R A A  E    R+N G  EI + E+SD        
Subjt:  CPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSRPPRAAAAGGEATPARRNGGGREIGLIEVSD--------

Query:  ------LELPDIEWISELLK
               ELP IEWISELL+
Subjt:  ------LELPDIEWISELLK

XP_038878131.1 zinc finger CCCH domain-containing protein 54 [Benincasa hispida]4.0e-8072.86Show/hide
Query:  MFQGFIFGINDVYGQDFSAVSPPEQIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFA
        MFQGF+FGINDVYG +FSAVS PE ID T AMFSSDEFRM+AYKIQRCPR  SHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFR+GSCPKGDFCEFA
Subjt:  MFQGFIFGINDVYGQDFSAVSPPEQIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFA

Query:  HGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSR----------PPRAAAAGGEATPARRNGGGRE----IGLIEVSDLELP
        HGVFEYWLHP RYRTR+CNAGRFC+RKVCFFAHSP +LRPE+KQK   N  R          P      G    P R   GGRE     GL EVS+L+LP
Subjt:  HGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSR----------PPRAAAAGGEATPARRNGGGRE----IGLIEVSDLELP

Query:  DIEWISELLK
         +EWISELL+
Subjt:  DIEWISELLK

TrEMBL top hitse value%identityAlignment
A0A1S3BYP8 zinc finger CCCH domain-containing protein 541.5e-8070.18Show/hide
Query:  MFQGFIFGINDVYGQDFSAVSPP--------EQIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCP
        MFQGF+FGINDVYG +FSAVS P        E++D T A+FS+DEFRM++YKIQRCPR  SHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFR+GSCP
Subjt:  MFQGFIFGINDVYGQDFSAVSPP--------EQIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCP

Query:  KGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSR----------PPRAAAAGGEATPARRNGGGRE----IGLI
        KGDFCEFAHGVFEYWLHP RYRTR+CNAGRFC+RKVCFFAHSP++LRPE+K K  LN  R          PP     G    PAR NGGGR+     G  
Subjt:  KGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSR----------PPRAAAAGGEATPARRNGGGRE----IGLI

Query:  EVSDLELPDIEWISELLK
        +VS+LELP IEWISELLK
Subjt:  EVSDLELPDIEWISELLK

A0A5A7TRB5 Zinc finger CCCH domain-containing protein 541.5e-8070.18Show/hide
Query:  MFQGFIFGINDVYGQDFSAVSPP--------EQIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCP
        MFQGF+FGINDVYG +FSAVS P        E++D T A+FS+DEFRM++YKIQRCPR  SHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFR+GSCP
Subjt:  MFQGFIFGINDVYGQDFSAVSPP--------EQIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCP

Query:  KGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSR----------PPRAAAAGGEATPARRNGGGRE----IGLI
        KGDFCEFAHGVFEYWLHP RYRTR+CNAGRFC+RKVCFFAHSP++LRPE+K K  LN  R          PP     G    PAR NGGGR+     G  
Subjt:  KGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSR----------PPRAAAAGGEATPARRNGGGRE----IGLI

Query:  EVSDLELPDIEWISELLK
        +VS+LELP IEWISELLK
Subjt:  EVSDLELPDIEWISELLK

A0A6J1CJI1 zinc finger CCCH domain-containing protein 54 isoform X13.6e-6661.93Show/hide
Query:  MFQGFIFGIND-VYGQDFSAVSP-PEQIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCE
        MFQGF  GIN+ V+  DFS      EQ++  AA+F SDEFRMFAYKIQRCPRT SHDWTECPYAHRGEKAQRRD RRFNY+AVACPAFR G+CP+GDFCE
Subjt:  MFQGFIFGIND-VYGQDFSAVSP-PEQIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCE

Query:  FAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSR---PPRAAAA-----------------GGEATPARRNGGGREIGLI
        +AHGVFEYWLHP RYRTR+CNAGRFC+RKVCFFAH+P+QLR E+KQK   N  R   P  A  A                 G      R     R  G  
Subjt:  FAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSR---PPRAAAA-----------------GGEATPARRNGGGREIGLI

Query:  EVSDLELPDIEWISELLK
        EVSD +LP I WI ELL+
Subjt:  EVSDLELPDIEWISELLK

A0A6J1E9W0 zinc finger CCCH domain-containing protein 543.6e-7465.45Show/hide
Query:  MFQGFIFGINDVYGQDFSAVSPPE----------QIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGS
        M QGF+FGINDVYG +F+AV+ PE          Q D T A+F+SDEFRM+A+KIQRCP++ SHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFRTGS
Subjt:  MFQGFIFGINDVYGQDFSAVSPPE----------QIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGS

Query:  CPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSRPPRAAAAGGEATPARRNGGGREIGLIEVSD--------
        CPKGDFCEFAHGVFE+WLHP RYRTR+CNAGRFC+RKVCFFAHSP++LRPE+K KL  + +   RAA A  E    R+N G  EI + E+SD        
Subjt:  CPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSRPPRAAAAGGEATPARRNGGGREIGLIEVSD--------

Query:  ------LELPDIEWISELLK
               ELP IEWISELL+
Subjt:  ------LELPDIEWISELLK

A0A6J1JDT4 zinc finger CCCH domain-containing protein 541.0e-7365Show/hide
Query:  MFQGFIFGINDVYGQDFSAVSPPE----------QIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGS
        MFQGF+FGINDVYG +F+AV+ PE          Q + T A+F+SDEFRM+A+KIQRCP++ SHDWTECPYAHRGEKAQRRDPRRFNY+AVACPAFRTGS
Subjt:  MFQGFIFGINDVYGQDFSAVSPPE----------QIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGS

Query:  CPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSRPPRAAAAGGEATPARRNGGGREIGLIEVSD--------
        CPKGDFCEFAHGVFE+WLHP RYRTR+CNAGRFC+RKVCFFAHSP++LRPE+K KL    +   RAA A  +    R+N G  EI + E+SD        
Subjt:  CPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSRPPRAAAAGGEATPARRNGGGREIGLIEVSD--------

Query:  ------LELPDIEWISELLK
               ELP IEWISELL+
Subjt:  ------LELPDIEWISELLK

SwissProt top hitse value%identityAlignment
O65036 Zinc finger CCCH domain-containing protein 542.0e-5366.43Show/hide
Query:  AMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCF
        A++ SDEFRM+AYKI+RCPRT SHDWTECPYAHRGEKA RRDPRR+ Y AVACPAFR G+C +GD CEFAHGVFEYWLHP RYRTR+CNAG  C+RKVCF
Subjt:  AMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCF

Query:  FAHSPDQLRPESKQKLMLNGSRPPRAAAAG-GEATPARRNGGG
        FAH+P+QLR    +       RP RA   G G+    R +  G
Subjt:  FAHSPDQLRPESKQKLMLNGSRPPRAAAAG-GEATPARRNGGG

O82199 Zinc finger CCCH domain-containing protein 209.2e-4366.36Show/hide
Query:  FSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFA
        ++ D FRM+ +K++RC R  SHDWTECPYAH GEKA+RRDPR+F+Y+  ACP FR G C +GD CEF+HGVFE WLHP RYRT+ C  G  CRR+VCFFA
Subjt:  FSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFA

Query:  HSPDQLR
        HSPDQ+R
Subjt:  HSPDQLR

O82307 Zinc finger CCCH domain-containing protein 237.0e-4367.29Show/hide
Query:  FSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFA
        FSSDEFR++ +KI+RC R  SHDWTECP+AH GEKA+RRDPR+F+Y+  ACP FR GSC +GD CEF+HGVFE WLHP RYRT+ C  G  CRR++CFFA
Subjt:  FSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFA

Query:  HSPDQLR
        H+ +QLR
Subjt:  HSPDQLR

Q6L4N4 Zinc finger CCCH domain-containing protein 355.7e-4560.29Show/hide
Query:  FSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFA
        ++ DEFRM+ +K++RC R  SHDWTECP+AH GEKA+RRDPRR+ Y+  ACP FR G C +GD CEFAHGVFE WLHP RYRT+ C  G  CRR+VCFFA
Subjt:  FSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFA

Query:  HSPDQLR--PESKQKLMLNGSRPPRAAAAGGEATPA
        H+PDQLR  P S+Q+    GS  PR    GG    A
Subjt:  HSPDQLR--PESKQKLMLNGSRPPRAAAAGGEATPA

Q9M0G2 Zinc finger CCCH domain-containing protein 495.4e-4368.22Show/hide
Query:  FSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFA
        +S D FRM+ +K++RC R  SHDWTECPYAH GEKA+RRDPR+++Y+  ACP FR G C KGD CEFAHGVFE WLHP RYRT+ C  G  C RK+CFFA
Subjt:  FSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFA

Query:  HSPDQLR
        HSPDQLR
Subjt:  HSPDQLR

Arabidopsis top hitse value%identityAlignment
AT2G19810.1 CCCH-type zinc finger family protein6.5e-4466.36Show/hide
Query:  FSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFA
        ++ D FRM+ +K++RC R  SHDWTECPYAH GEKA+RRDPR+F+Y+  ACP FR G C +GD CEF+HGVFE WLHP RYRT+ C  G  CRR+VCFFA
Subjt:  FSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFA

Query:  HSPDQLR
        HSPDQ+R
Subjt:  HSPDQLR

AT2G25900.1 Zinc finger C-x8-C-x5-C-x3-H type family protein5.0e-4467.29Show/hide
Query:  FSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFA
        FSSDEFR++ +KI+RC R  SHDWTECP+AH GEKA+RRDPR+F+Y+  ACP FR GSC +GD CEF+HGVFE WLHP RYRT+ C  G  CRR++CFFA
Subjt:  FSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFA

Query:  HSPDQLR
        H+ +QLR
Subjt:  HSPDQLR

AT2G25900.2 Zinc finger C-x8-C-x5-C-x3-H type family protein5.0e-4467.29Show/hide
Query:  FSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFA
        FSSDEFR++ +KI+RC R  SHDWTECP+AH GEKA+RRDPR+F+Y+  ACP FR GSC +GD CEF+HGVFE WLHP RYRT+ C  G  CRR++CFFA
Subjt:  FSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFA

Query:  HSPDQLR
        H+ +QLR
Subjt:  HSPDQLR

AT4G29190.1 Zinc finger C-x8-C-x5-C-x3-H type family protein3.8e-4468.22Show/hide
Query:  FSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFA
        +S D FRM+ +K++RC R  SHDWTECPYAH GEKA+RRDPR+++Y+  ACP FR G C KGD CEFAHGVFE WLHP RYRT+ C  G  C RK+CFFA
Subjt:  FSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCFFA

Query:  HSPDQLR
        HSPDQLR
Subjt:  HSPDQLR

AT5G07500.1 Zinc finger C-x8-C-x5-C-x3-H type family protein1.4e-5466.43Show/hide
Query:  AMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCF
        A++ SDEFRM+AYKI+RCPRT SHDWTECPYAHRGEKA RRDPRR+ Y AVACPAFR G+C +GD CEFAHGVFEYWLHP RYRTR+CNAG  C+RKVCF
Subjt:  AMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHPGRYRTRSCNAGRFCRRKVCF

Query:  FAHSPDQLRPESKQKLMLNGSRPPRAAAAG-GEATPARRNGGG
        FAH+P+QLR    +       RP RA   G G+    R +  G
Subjt:  FAHSPDQLRPESKQKLMLNGSRPPRAAAAG-GEATPARRNGGG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCAAGGATTTATTTTCGGCATAAATGACGTGTACGGCCAGGATTTCTCCGCCGTGTCGCCGCCGGAGCAAATCGACTACACGGCGGCGATGTTCAGCTCCGACGA
GTTTCGAATGTTCGCCTACAAGATCCAACGGTGTCCAAGGACCTGCAGCCACGATTGGACGGAATGTCCGTACGCCCACCGCGGCGAGAAGGCGCAACGCCGTGACCCAC
GGCGGTTCAATTACACCGCCGTGGCCTGCCCGGCCTTCCGTACGGGCAGCTGCCCGAAGGGCGATTTTTGTGAATTTGCCCATGGGGTTTTCGAGTACTGGCTCCACCCG
GGCCGGTACCGAACCCGGTCCTGTAATGCAGGCCGGTTCTGCCGACGGAAGGTTTGTTTTTTTGCTCACTCGCCGGATCAGCTCCGGCCCGAGTCCAAACAGAAGCTTAT
GTTGAATGGGAGCCGGCCGCCGCGCGCGGCGGCGGCAGGCGGTGAAGCTACTCCGGCGAGGAGGAACGGCGGCGGACGGGAAATTGGATTAATAGAGGTGTCGGATTTGG
AGTTGCCGGATATTGAATGGATATCGGAATTGCTGAAGTAA
mRNA sequenceShow/hide mRNA sequence
CTTGAAACCAGACCTTTTCTTCAGCTCTCTCTTCCCAACAATGGTGTTTCTCTCTCCTCTTCTTCAACCAAATCTTCTCTCTCGGGTATCACAATGTTAAATTAATATAA
TAATAAAAAAAAACCCATCTCTTAATTTCTTTCAAATTCCTCAAAGTTTCAATCTTTTGTTTTTATAATTATACTAACACATTTGTTTCTCTTACAATACAGGTGAATTA
ATATATTAAAAAAAGAACAACATGGCTTGATTTATTATTTACATATTTATTATTCTTATATTTTTCAAAAACGGAGAAAAAAAAATGTTTCAAGGATTTATTTTCGGCAT
AAATGACGTGTACGGCCAGGATTTCTCCGCCGTGTCGCCGCCGGAGCAAATCGACTACACGGCGGCGATGTTCAGCTCCGACGAGTTTCGAATGTTCGCCTACAAGATCC
AACGGTGTCCAAGGACCTGCAGCCACGATTGGACGGAATGTCCGTACGCCCACCGCGGCGAGAAGGCGCAACGCCGTGACCCACGGCGGTTCAATTACACCGCCGTGGCC
TGCCCGGCCTTCCGTACGGGCAGCTGCCCGAAGGGCGATTTTTGTGAATTTGCCCATGGGGTTTTCGAGTACTGGCTCCACCCGGGCCGGTACCGAACCCGGTCCTGTAA
TGCAGGCCGGTTCTGCCGACGGAAGGTTTGTTTTTTTGCTCACTCGCCGGATCAGCTCCGGCCCGAGTCCAAACAGAAGCTTATGTTGAATGGGAGCCGGCCGCCGCGCG
CGGCGGCGGCAGGCGGTGAAGCTACTCCGGCGAGGAGGAACGGCGGCGGACGGGAAATTGGATTAATAGAGGTGTCGGATTTGGAGTTGCCGGATATTGAATGGATATCG
GAATTGCTGAAGTAAAAATTAAAATGGGTTTTTGGGGTTTATTTTGTCTTAAATTGTAAATATTGCTTGTTG
Protein sequenceShow/hide protein sequence
MFQGFIFGINDVYGQDFSAVSPPEQIDYTAAMFSSDEFRMFAYKIQRCPRTCSHDWTECPYAHRGEKAQRRDPRRFNYTAVACPAFRTGSCPKGDFCEFAHGVFEYWLHP
GRYRTRSCNAGRFCRRKVCFFAHSPDQLRPESKQKLMLNGSRPPRAAAAGGEATPARRNGGGREIGLIEVSDLELPDIEWISELLK