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Sed0020326 (gene) of Chayote v1 genome

Gene IDSed0020326
OrganismSechium edule (Chayote v1)
DescriptionMicrotubule-associated proteins 70-5 isoform 1
Genome locationLG01:10378222..10378518
RNA-Seq ExpressionSed0020326
SyntenySed0020326
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042343.1 hypothetical protein E6C27_scaffold795G00410 [Cucumis melo var. makuwa]2.3e-3183.87Show/hide
Query:  IQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEYAEYQYKYQ
        IQ K+LQHKDQITVVAAVSVVLSLF Y AP FLSILAFFWPLF STAVLLV MTAFGGGFQVG+E+HG RAGE ILDYVAGRPE  E  YKYQ
Subjt:  IQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEYAEYQYKYQ

KAG6573520.1 hypothetical protein SDJN03_27407, partial [Cucurbita argyrosperma subsp. sororia]1.6e-4093.88Show/hide
Query:  MDIQVIQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEYAEYQYKYQ
        MDIQVIQTKVLQHKDQ+TVVAAVSVV+SLF YAAP FLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGE+AGE+ILDYVAGRPEYAEYQYKYQ
Subjt:  MDIQVIQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEYAEYQYKYQ

KAG6583721.1 hypothetical protein SDJN03_19653, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2070.53Show/hide
Query:  IQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAM-TAFGGGFQVGTEVHGER-AGEKILDYVAGRPEYAEYQYKYQ
        +QTKVLQ+KDQITVVAAVSVVLSLF          LAFFWPLF STA LLV M  AF GGFQVGT++HG R AGE ILDYVAGRPEY +  YKY+
Subjt:  IQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAM-TAFGGGFQVGTEVHGER-AGEKILDYVAGRPEYAEYQYKYQ

KAG7012637.1 hypothetical protein SDJN02_25389, partial [Cucurbita argyrosperma subsp. argyrosperma]7.0e-4194.9Show/hide
Query:  MDIQVIQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEYAEYQYKYQ
        MDIQVIQTKVLQHKDQ+TVVAAVSVV+SLF YAAP FLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGE+ILDYVAGRPEYAEYQYKYQ
Subjt:  MDIQVIQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEYAEYQYKYQ

KGN64996.1 hypothetical protein Csa_022896 [Cucumis sativus]3.0e-3183.87Show/hide
Query:  IQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEYAEYQYKYQ
        I  KVLQHKDQ+TVVAAVSVVLSLF YAAP FLSILAFFWPLF STAVLLV M AFGGGFQVGTE+HG RAGE ILDYVAGRPE  E  YKYQ
Subjt:  IQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEYAEYQYKYQ

TrEMBL top hitse value%identityAlignment
A0A061GGG1 Uncharacterized protein1.7e-1650.54Show/hide
Query:  IQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEYAEYQYKYQ
        IQ K++Q++   T+    S +++   Y AP  L+IL +FWPLF ST V LVA+ AFGGG Q+ TEVHGE+AG+ ++DYVA RPE+AE   K++
Subjt:  IQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEYAEYQYKYQ

A0A0A0LYI8 Uncharacterized protein1.4e-3183.87Show/hide
Query:  IQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEYAEYQYKYQ
        I  KVLQHKDQ+TVVAAVSVVLSLF YAAP FLSILAFFWPLF STAVLLV M AFGGGFQVGTE+HG RAGE ILDYVAGRPE  E  YKYQ
Subjt:  IQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEYAEYQYKYQ

A0A2N9EZM9 Uncharacterized protein1.1e-1557.65Show/hide
Query:  IQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEY
        I  K+LQ++  +T+ A V +VLSL  YAAP  ++ILAFFWPLF STAVLL+A+ AFGG  Q  TE HG +AG+ IL+YV G+PE+
Subjt:  IQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEY

A0A396J444 Uncharacterized protein4.5e-1753.61Show/hide
Query:  DIQVIQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEYA-EYQYKY
        D  V+  K+L+++ QIT+   +S+V SL  Y AP FL++LA+FWPLF ST V LVA+ AFGG  +  TE HGE+AGE +LDYVAG+PE+  E QY +
Subjt:  DIQVIQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEYA-EYQYKY

A0A5D3CU44 Uncharacterized protein1.1e-3183.87Show/hide
Query:  IQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEYAEYQYKYQ
        IQ K+LQHKDQITVVAAVSVVLSLF Y AP FLSILAFFWPLF STAVLLV MTAFGGGFQVG+E+HG RAGE ILDYVAGRPE  E  YKYQ
Subjt:  IQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEYAEYQYKYQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G13175.1 unknown protein1.3e-0539.53Show/hide
Query:  KVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQV---GTEVHGERAG-----EKILDYVAG
        K+L+ K QI     +S++       +P FL++L++FWPLFLSTA+ L A+  F     +    T + GE AG     E ILDYV G
Subjt:  KVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQV---GTEVHGERAG-----EKILDYVAG

AT4G16400.1 unknown protein8.6e-1347.62Show/hide
Query:  IQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPE
        IQ K+++++    V   VSV+++   YAAP  L+ILA+FWPLF STA  L     FGG  Q+  E  GER    ++DYVAGRPE
Subjt:  IQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATTCAGGTCATTCAAACAAAGGTTCTCCAACACAAAGACCAGATAACTGTAGTAGCAGCAGTTTCAGTGGTTCTTTCATTGTTTGCATATGCAGCCCCCAGTTT
TCTAAGTATTCTAGCATTCTTTTGGCCTCTTTTTCTCTCCACAGCCGTACTCTTGGTGGCAATGACTGCCTTTGGAGGAGGTTTTCAAGTTGGAACCGAAGTGCATGGTG
AAAGAGCAGGTGAAAAGATCCTAGATTACGTTGCAGGACGGCCTGAATACGCCGAATACCAATATAAGTACCAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGACATTCAGGTCATTCAAACAAAGGTTCTCCAACACAAAGACCAGATAACTGTAGTAGCAGCAGTTTCAGTGGTTCTTTCATTGTTTGCATATGCAGCCCCCAGTTT
TCTAAGTATTCTAGCATTCTTTTGGCCTCTTTTTCTCTCCACAGCCGTACTCTTGGTGGCAATGACTGCCTTTGGAGGAGGTTTTCAAGTTGGAACCGAAGTGCATGGTG
AAAGAGCAGGTGAAAAGATCCTAGATTACGTTGCAGGACGGCCTGAATACGCCGAATACCAATATAAGTACCAATAA
Protein sequenceShow/hide protein sequence
MDIQVIQTKVLQHKDQITVVAAVSVVLSLFAYAAPSFLSILAFFWPLFLSTAVLLVAMTAFGGGFQVGTEVHGERAGEKILDYVAGRPEYAEYQYKYQ