| GenBank top hits | e value | %identity | Alignment |
|---|
| XP_008461807.1 PREDICTED: DNA-directed RNA polymerases II, IV and V subunit 11 [Cucumis melo] | 1.4e-56 | 95.69 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNI+RMQLHRD+NVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEAEFAKFSRDF
L+NAFEAEFAK SRD+
Subjt: LRNAFEAEFAKFSRDF
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| XP_011651771.1 DNA-directed RNA polymerases II, IV and V subunit 11 isoform X1 [Cucumis sativus] | 2.8e-57 | 96.55 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNI+RMQLHRD+NVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEAEFAKFSRDF
L+NAFEAEFAKFSRD+
Subjt: LRNAFEAEFAKFSRDF
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| XP_015952950.1 DNA-directed RNA polymerases II, IV and V subunit 11 isoform X3 [Arachis duranensis] | 5.4e-56 | 93.97 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNI+RMQLHRD+NVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLD+ELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEAEFAKFSRDF
L+NAFEAE KFSRD+
Subjt: LRNAFEAEFAKFSRDF
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| XP_022152550.1 DNA-directed RNA polymerases II, IV and V subunit 11 [Momordica charantia] | 5.4e-56 | 93.97 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNI+RMQLHRD+NVLFAGYKLPHPL+YKII+RIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEAEFAKFSRDF
L+NAFEAE AKFSRD+
Subjt: LRNAFEAEFAKFSRDF
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| XP_022949378.1 DNA-directed RNA polymerases II, IV and V subunit 11 [Cucurbita moschata] | 1.1e-56 | 95.69 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNI+RMQLHRD+NVLFAGYKLPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEAEFAKFSRDF
LRN FEAEFAKFSRD+
Subjt: LRNAFEAEFAKFSRDF
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LCD5 RNA_pol_L_2 domain-containing protein | 1.4e-57 | 96.55 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNI+RMQLHRD+NVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEAEFAKFSRDF
L+NAFEAEFAKFSRD+
Subjt: LRNAFEAEFAKFSRDF
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| A0A1S3CG10 DNA-directed RNA polymerases II, IV and V subunit 11 | 6.8e-57 | 95.69 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNI+RMQLHRD+NVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEAEFAKFSRDF
L+NAFEAEFAK SRD+
Subjt: LRNAFEAEFAKFSRDF
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| A0A6J1DE90 DNA-directed RNA polymerases II, IV and V subunit 11 | 2.6e-56 | 93.97 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNI+RMQLHRD+NVLFAGYKLPHPL+YKII+RIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEAEFAKFSRDF
L+NAFEAE AKFSRD+
Subjt: LRNAFEAEFAKFSRDF
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| A0A6J1GBY1 DNA-directed RNA polymerases II, IV and V subunit 11 | 5.2e-57 | 95.69 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNI+RMQLHRD+NVLFAGYKLPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEAEFAKFSRDF
LRN FEAEFAKFSRD+
Subjt: LRNAFEAEFAKFSRDF
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| A0A6P4CK93 DNA-directed RNA polymerases II, IV and V subunit 11 isoform X3 | 2.6e-56 | 93.97 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNI+RMQLHRD+NVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLD+ELDH
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEAEFAKFSRDF
L+NAFEAE KFSRD+
Subjt: LRNAFEAEFAKFSRDF
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| O08740 DNA-directed RNA polymerase II subunit RPB11 | 1.2e-26 | 52.38 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP +E F++ EG KK++ +DTK+ NA FTI +E+HT+GNI++ QL +D VLFAGYK+PHPL++KII+R+ TT SP +A+ AI DL EL
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAF
L F
Subjt: LRNAF
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| P52435 DNA-directed RNA polymerase II subunit RPB11-a | 1.2e-26 | 52.38 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP +E F++ EG KK++ +DTK+ NA FTI +E+HT+GNI++ QL +D VLFAGYK+PHPL++KII+R+ TT SP +A+ AI DL EL
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAF
L F
Subjt: LRNAF
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| Q32P79 DNA-directed RNA polymerase II subunit RPB11 | 1.2e-26 | 52.38 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP +E F++ EG KK++ +DTK+ NA FTI +E+HT+GNI++ QL +D VLFAGYK+PHPL++KII+R+ TT SP +A+ AI DL EL
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAF
L F
Subjt: LRNAF
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| Q38859 DNA-directed RNA polymerases II, IV and V subunit 11 | 2.8e-55 | 88.79 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP+RYERFVVPEGTKKVSY+RDTKIINAASFT+ERE+HTIGNIVRMQLHRD+NVLFAGY+LPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELD+
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEAEFAKFSRDF
L+N FEAE AKFS F
Subjt: LRNAFEAEFAKFSRDF
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| Q86JJ5 DNA-directed RNA polymerase II subunit rpb11 | 3.2e-27 | 47.75 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAPDR+E FV+P+G KKV+ RDTKI NA+ FTI +E+HTIGN++RMQL D +++FAGY++PHPL++ + +RI T + ++P++ +++ L +E
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEAEFAK
L N+F + K
Subjt: LRNAFEAEFAK
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G29540.1 RNApolymerase 14 kDa subunit | 4.0e-09 | 31.76 | Show/hide |
Query: INAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLRNAFEAEFAKF
++ ASFT+ E+HT+ N VR L++D V A Y +PHP ++ +R+ TT + + + A +L + H+R+ F+ A++
Subjt: INAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLRNAFEAEFAKF
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| AT2G29540.2 RNApolymerase 14 kDa subunit | 4.0e-09 | 31.76 | Show/hide |
Query: INAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLRNAFEAEFAKF
++ ASFT+ E+HT+ N VR L++D V A Y +PHP ++ +R+ TT + + + A +L + H+R+ F+ A++
Subjt: INAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDHLRNAFEAEFAKF
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| AT3G52090.1 DNA-directed RNA polymerase, RBP11-like | 2.0e-56 | 88.79 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
MNAP+RYERFVVPEGTKKVSY+RDTKIINAASFT+ERE+HTIGNIVRMQLHRD+NVLFAGY+LPHPL+YKIIVRIHTTSQSSPMQAYNQAINDLDKELD+
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVRIHTTSQSSPMQAYNQAINDLDKELDH
Query: LRNAFEAEFAKFSRDF
L+N FEAE AKFS F
Subjt: LRNAFEAEFAKFSRDF
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| AT3G52090.2 DNA-directed RNA polymerase, RBP11-like | 1.1e-51 | 70.55 | Show/hide |
Query: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVR--------------------------
MNAP+RYERFVVPEGTKKVSY+RDTKIINAASFT+ERE+HTIGNIVRMQLHRD+NVLFAGY+LPHPL+YKIIVR
Subjt: MNAPDRYERFVVPEGTKKVSYERDTKIINAASFTIEREEHTIGNIVRMQLHRDDNVLFAGYKLPHPLQYKIIVR--------------------------
Query: ----IHTTSQSSPMQAYNQAINDLDKELDHLRNAFEAEFAKFSRDF
IHTTSQSSPMQAYNQAINDLDKELD+L+N FEAE AKFS F
Subjt: ----IHTTSQSSPMQAYNQAINDLDKELDHLRNAFEAEFAKFSRDF
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