; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020333 (gene) of Chayote v1 genome

Gene IDSed0020333
OrganismSechium edule (Chayote v1)
Descriptionpollen-specific leucine-rich repeat extensin-like protein 1 isoform X1
Genome locationLG10:3074758..3079412
RNA-Seq ExpressionSed0020333
SyntenySed0020333
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604268.1 hypothetical protein SDJN03_04877, partial [Cucurbita argyrosperma subsp. sororia]5.7e-1845.23Show/hide
Query:  MGACATKPKVLKADSGE--APAPAPETTPEDTVAGGGADLETKLENG-GDGKATEIADDDKVDTNSRSLSNLFNDQIESNDSDEKEKKTTLDPSEKPETA
        MGACATKPKVLK DSG+  APAPAPE +PE TV       ETKLENG  D + TEI D+DKVD+  R LS+LFNDQ         EK    DPSEK E  
Subjt:  MGACATKPKVLKADSGE--APAPAPETTPEDTVAGGGADLETKLENG-GDGKATEIADDDKVDTNSRSLSNLFNDQIESNDSDEKEKKTTLDPSEKPETA

Query:  VETDKQPNPP-------LLEPE------PESEEKPCETN--SPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQTIEDHTVKVEAN
         E++K+ NPP        + PE      P +EEKP ETN   PEPP SD VT+        +K +  +++T   E  +    +K  +T E+  +KV +N
Subjt:  VETDKQPNPP-------LLEPE------PESEEKPCETN--SPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQTIEDHTVKVEAN

KAG7034425.1 hypothetical protein SDJN02_04154 [Cucurbita argyrosperma subsp. argyrosperma]2.8e-1744.72Show/hide
Query:  MGACATKPKVLKADSGEAPA--PAPETTPEDTVAGGGADLETKLENG-GDGKATEIADDDKVDTNSRSLSNLFNDQIESNDSDEKEKKTTLDPSEKPETA
        MGACATKPKVLK DSG+APA  PAPE +PE TV       ETKLENG  D + TEI D+DKVD+  R LS+LFNDQ         EK    DPSEK E  
Subjt:  MGACATKPKVLKADSGEAPA--PAPETTPEDTVAGGGADLETKLENG-GDGKATEIADDDKVDTNSRSLSNLFNDQIESNDSDEKEKKTTLDPSEKPETA

Query:  VETDKQPNPP-------LLEPE------PESEEKPCETN--SPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQTIEDHTVKVEAN
         E++K+ NPP        + PE      P +EEKP ETN   PEPP SD VT+        +K +  +++    E  +    +K  +T E+  +KV +N
Subjt:  VETDKQPNPP-------LLEPE------PESEEKPCETN--SPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQTIEDHTVKVEAN

XP_022979013.1 early nodulin-75-like [Cucurbita maxima]2.6e-1844.95Show/hide
Query:  MGACATKPKVLKADSGE--APAPAPETTPEDTVAGGGADLETKLENGGDG-KATEIADDDKVDTNSRSLSNLFNDQIESNDSDEKEKKTTLDPSEKPETA
        MGACATKPKVLKADSGE  APAPAPE +PE TVA      ETKLENG  G + TEI D+DKV +  R LS+LF+DQ         EK    DPSEK E  
Subjt:  MGACATKPKVLKADSGE--APAPAPETTPEDTVAGGGADLETKLENGGDG-KATEIADDDKVDTNSRSLSNLFNDQIESNDSDEKEKKTTLDPSEKPETA

Query:  VETDKQPNPP-------LLEPE------PESEEKPCETNSPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQT-IEDHTVKVEAN
        +ET+K+ NPP        + PE      P +EEKP ETN PEP P   V+D  T  ++ +++ ++ + +   E   E  +  +  T  E+  +KV +N
Subjt:  VETDKQPNPP-------LLEPE------PESEEKPCETNSPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQT-IEDHTVKVEAN

XP_038881338.1 early nodulin-75-like isoform X1 [Benincasa hispida]5.3e-2448.76Show/hide
Query:  MGACATKPKVLKADSGEAPAPAPETTPEDTVAGGGADLETKLENGGDGKATEIADDDKVDTNSRSLSNLFNDQIE-SNDSDEKEKKTTLDPSEKPETA-V
        MGACATKPKVLKA++GEAPAPAPE +PE+  AG      TK EN GDGKATEI DDDKVD+ SRSLS+LF DQ E   +S+EKEK    +P EK +T   
Subjt:  MGACATKPKVLKADSGEAPAPAPETTPEDTVAGGGADLETKLENGGDGKATEIADDDKVDTNSRSLSNLFNDQIE-SNDSDEKEKKTTLDPSEKPETA-V

Query:  ETDKQPNPPLLEPEPESEEKPCETNSPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQTIEDHTV---KVEANE-PIETEKGVEVIS
        ET KQ    +++P P  EEKP E N PEP P   V+D  T    ++++ +E       +  + I D+   +  +++ +   K E++E P ETEK V+VIS
Subjt:  ETDKQPNPPLLEPEPESEEKPCETNSPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQTIEDHTV---KVEANE-PIETEKGVEVIS

Query:  N
        N
Subjt:  N

XP_038881339.1 fibrous sheath CABYR-binding protein-like isoform X2 [Benincasa hispida]1.4e-2448.5Show/hide
Query:  MGACATKPKVLKADSGEAPAPAPETTPEDTVAGGGADLETKLENGGDGKATEIADDDKVDTNSRSLSNLFNDQIESNDSDEKEKKTTLDPSEKPETA-VE
        MGACATKPKVLKA++GEAPAPAPE +PE+  AG      TK EN GDGKATEI DDDKVD+ SRSLS+LF DQ    +S+EKEK    +P EK +T   E
Subjt:  MGACATKPKVLKADSGEAPAPAPETTPEDTVAGGGADLETKLENGGDGKATEIADDDKVDTNSRSLSNLFNDQIESNDSDEKEKKTTLDPSEKPETA-VE

Query:  TDKQPNPPLLEPEPESEEKPCETNSPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQTIEDHTV---KVEANE-PIETEKGVEVISN
        T KQ    +++P P  EEKP E N PEP P   V+D  T    ++++ +E       +  + I D+   +  +++ +   K E++E P ETEK V+VISN
Subjt:  TDKQPNPPLLEPEPESEEKPCETNSPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQTIEDHTV---KVEANE-PIETEKGVEVISN

TrEMBL top hitse value%identityAlignment
A0A0A0KFS6 Uncharacterized protein9.5e-1141.75Show/hide
Query:  MGACATKPKVLKADSGEAPAPAPETTPEDTVAGGGADLETKLENGGDGKATEI-ADDDKVDTNSRSLSNLFNDQIESNDSDEKEKKTTLDPSEKPET-AV
        MGACATKPK LKA+SG+AP   P               ETK ++ GD KA EI  DDDKVD+   SL++LF  Q E N    KEK    DP EK ET   
Subjt:  MGACATKPKVLKADSGEAPAPAPETTPEDTVAGGGADLETKLENGGDGKATEI-ADDDKVDTNSRSLSNLFNDQIESNDSDEKEKKTTLDPSEKPET-AV

Query:  ETDKQPNPPLLEPEPESEEKPCETNSPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQTIEDHTVKVEANEPIETEKGVEV
        ET+KQ N       P  EEKP E N PEP  SD VT+  T+T   ++T  E     +T  N    ++ +            A +P ETEK V+V
Subjt:  ETDKQPNPPLLEPEPESEEKPCETNSPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQTIEDHTVKVEANEPIETEKGVEV

A0A1S3B2G7 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X12.4e-1444.17Show/hide
Query:  MGACATKPKVLKADSGEAPAPAPETTPEDTVAGGGADLETKLENGGDGKATEI-ADDDKVDTNSRSLSNLF-NDQIESNDSDEKEKKTTLDPSEKPETAV
        MGACATKPK +KA+SGEAP   P               ETK ++ GD KA EI  DDDKVD+  RSLSNLF +DQ E N    KEK    DP EK ET  
Subjt:  MGACATKPKVLKADSGEAPAPAPETTPEDTVAGGGADLETKLENGGDGKATEI-ADDDKVDTNSRSLSNLF-NDQIESNDSDEKEKKTTLDPSEKPETAV

Query:  ETDKQPNPPLLEP--EPESEEKPCETNSPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQTIEDHTV-------KVEANE-PIETEK
              NPP  E   +P  EEKP E N PEP  SD VT+  T+ S      SE+   T  E N+EI  + + +   + T        K E++E P ETEK
Subjt:  ETDKQPNPPLLEP--EPESEEKPCETNSPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQTIEDHTV-------KVEANE-PIETEK

Query:  GVEVIS
         V+VI+
Subjt:  GVEVIS

A0A5A7SHD6 Pollen-specific leucine-rich repeat extensin-like protein 1 isoform X12.4e-1444.17Show/hide
Query:  MGACATKPKVLKADSGEAPAPAPETTPEDTVAGGGADLETKLENGGDGKATEI-ADDDKVDTNSRSLSNLF-NDQIESNDSDEKEKKTTLDPSEKPETAV
        MGACATKPK +KA+SGEAP   P               ETK ++ GD KA EI  DDDKVD+  RSLSNLF +DQ E N    KEK    DP EK ET  
Subjt:  MGACATKPKVLKADSGEAPAPAPETTPEDTVAGGGADLETKLENGGDGKATEI-ADDDKVDTNSRSLSNLF-NDQIESNDSDEKEKKTTLDPSEKPETAV

Query:  ETDKQPNPPLLEP--EPESEEKPCETNSPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQTIEDHTV-------KVEANE-PIETEK
              NPP  E   +P  EEKP E N PEP  SD VT+  T+ S      SE+   T  E N+EI  + + +   + T        K E++E P ETEK
Subjt:  ETDKQPNPPLLEP--EPESEEKPCETNSPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQTIEDHTV-------KVEANE-PIETEK

Query:  GVEVIS
         V+VI+
Subjt:  GVEVIS

A0A6J1GDB0 pollen-specific leucine-rich repeat extensin-like protein 15.2e-1744.22Show/hide
Query:  MGACATKPKVLKADSGE--APAPAPETTPEDTVAGGGADLETKLENG-GDGKATEIADDDKVDTNSRSLSNLFNDQIESNDSDEKEKKTTLDPSEKPETA
        MGACATKPKVLK DSG+  APAPAPE +PE TV       ETKLE+G  D + TEI D+DKVD+  R LS+LFNDQ         EK    DPSEK E  
Subjt:  MGACATKPKVLKADSGE--APAPAPETTPEDTVAGGGADLETKLENG-GDGKATEIADDDKVDTNSRSLSNLFNDQIESNDSDEKEKKTTLDPSEKPETA

Query:  VETDKQPNPP-------LLEPE------PESEEKPCETN--SPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQTIEDHTVKVEAN
         E++K+ NPP        + PE      P +EEKP ETN   PEPP SD VT+        +K +  +++    E  +    +K  +T E+  +KV +N
Subjt:  VETDKQPNPP-------LLEPE------PESEEKPCETN--SPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQTIEDHTVKVEAN

A0A6J1IUX1 early nodulin-75-like1.2e-1844.95Show/hide
Query:  MGACATKPKVLKADSGE--APAPAPETTPEDTVAGGGADLETKLENGGDG-KATEIADDDKVDTNSRSLSNLFNDQIESNDSDEKEKKTTLDPSEKPETA
        MGACATKPKVLKADSGE  APAPAPE +PE TVA      ETKLENG  G + TEI D+DKV +  R LS+LF+DQ         EK    DPSEK E  
Subjt:  MGACATKPKVLKADSGE--APAPAPETTPEDTVAGGGADLETKLENGGDG-KATEIADDDKVDTNSRSLSNLFNDQIESNDSDEKEKKTTLDPSEKPETA

Query:  VETDKQPNPP-------LLEPE------PESEEKPCETNSPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQT-IEDHTVKVEAN
        +ET+K+ NPP        + PE      P +EEKP ETN PEP P   V+D  T  ++ +++ ++ + +   E   E  +  +  T  E+  +KV +N
Subjt:  VETDKQPNPP-------LLEPE------PESEEKPCETNSPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQT-IEDHTVKVEAN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAGCTTGTGCCACCAAGCCAAAGGTTCTAAAGGCCGATTCCGGCGAGGCTCCGGCACCGGCGCCGGAGACTACTCCGGAGGATACGGTGGCCGGCGGTGGAGCTGA
TCTTGAAACTAAACTGGAGAACGGCGGCGACGGGAAGGCCACGGAGATCGCCGATGATGACAAGGTGGACACTAATTCTCGTTCTCTTTCCAATTTGTTCAATGATCAGA
TCGAAAGTAACGACTCCGACGAAAAGGAGAAGAAAACAACATTAGATCCATCAGAAAAGCCAGAAACCGCAGTGGAAACCGATAAACAACCAAACCCACCGCTGCTAGAG
CCGGAACCGGAATCGGAGGAGAAGCCATGTGAAACAAACTCGCCGGAGCCACCACCTTCCGATCATGTTACAGACAAGACAACCATAACCTCAGACGCCGTCAAAACCCA
ATCTGAAGAAAAGTCAACGACCATGACTGAGTCAAATCAGGAAATTATTGACCAAAAAGATGGTCAAACTATTGAAGATCACACGGTCAAAGTTGAAGCCAATGAACCAA
TTGAAACAGAGAAAGGAGTTGAGGTAATTAGCAATTAA
mRNA sequenceShow/hide mRNA sequence
CCTAAATTGCCGAAACCCCTCTTTATAAATAAAAAACCCCAATTTCTTTGTGATTCATTTTCTTTCATTTTGAGAGAGAAAAATGGGAGCTTGTGCCACCAAGCCAAAGG
TTCTAAAGGCCGATTCCGGCGAGGCTCCGGCACCGGCGCCGGAGACTACTCCGGAGGATACGGTGGCCGGCGGTGGAGCTGATCTTGAAACTAAACTGGAGAACGGCGGC
GACGGGAAGGCCACGGAGATCGCCGATGATGACAAGGTGGACACTAATTCTCGTTCTCTTTCCAATTTGTTCAATGATCAGATCGAAAGTAACGACTCCGACGAAAAGGA
GAAGAAAACAACATTAGATCCATCAGAAAAGCCAGAAACCGCAGTGGAAACCGATAAACAACCAAACCCACCGCTGCTAGAGCCGGAACCGGAATCGGAGGAGAAGCCAT
GTGAAACAAACTCGCCGGAGCCACCACCTTCCGATCATGTTACAGACAAGACAACCATAACCTCAGACGCCGTCAAAACCCAATCTGAAGAAAAGTCAACGACCATGACT
GAGTCAAATCAGGAAATTATTGACCAAAAAGATGGTCAAACTATTGAAGATCACACGGTCAAAGTTGAAGCCAATGAACCAATTGAAACAGAGAAAGGAGTTGAGGTAAT
TAGCAATTAAAAAAAAGTTTATGCATAAATCTTTAATTAAATTAGCAAAGAATAACCCAAGATTGGATTGTTCCATTTTCGTTTTCTTTTTTCTTGGTTGTTATGGGA
Protein sequenceShow/hide protein sequence
MGACATKPKVLKADSGEAPAPAPETTPEDTVAGGGADLETKLENGGDGKATEIADDDKVDTNSRSLSNLFNDQIESNDSDEKEKKTTLDPSEKPETAVETDKQPNPPLLE
PEPESEEKPCETNSPEPPPSDHVTDKTTITSDAVKTQSEEKSTTMTESNQEIIDQKDGQTIEDHTVKVEANEPIETEKGVEVISN