; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Sed0020344 (gene) of Chayote v1 genome

Gene IDSed0020344
OrganismSechium edule (Chayote v1)
DescriptionLocalized to the inner membrane of the chloroplast
Genome locationLG01:18050836..18058765
RNA-Seq ExpressionSed0020344
SyntenySed0020344
Gene Ontology termsGO:0009706 - chloroplast inner membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6608647.1 hypothetical protein SDJN03_01989, partial [Cucurbita argyrosperma subsp. sororia]6.4e-7488.82Show/hide
Query:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        M+AISNSL+LT+ PQ QLS+GSNL+TA+KR GS+S T  LLNPGWVGKAK STF+RPLSVQAAYSDGGRSS+AGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        ALAG DRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLRTEDSPNGVAVNSDEVEPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

XP_022941515.1 uncharacterized protein LOC111446794 [Cucurbita moschata]1.3e-7489.41Show/hide
Query:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        M+AISNSL+LT+ PQ QLS+GSNL+TA+KR GS+S T LLLNPGWVGKAK STF+RPLSVQAAYSDGGRSS+AGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        ALAG DRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLRTEDSPNGVAVNSDEVEPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

XP_022981122.1 uncharacterized protein LOC111480366 [Cucurbita maxima]2.2e-7489.41Show/hide
Query:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        M+AISNSLVLT+ PQ QLS+GSNL+TA+KR GS+S T LLLNPGWVGKAK STF+RPLSVQAAYSDGGRSS+AGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        ALAG DRKDLMRKLPKFIYDEEKA+EKTRKVLAQKIEQLNSAIDEVS+QLRTEDSPNGVAVNSDEVEPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

XP_023521457.1 uncharacterized protein LOC111785280 [Cucurbita pepo subsp. pepo]1.7e-7488.82Show/hide
Query:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        M+AISNSL+LT+ PQ QLS+GSNL+TA+KR GS+S T LLLNPGWVGKAK STF+RPLSVQAAYSDGGRSS+AGIF+GGFVLGGL+VGTLGCVYAPQISK
Subjt:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        ALAG DRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLRTEDSPNGVAVNSDEVEPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

XP_038900139.1 uncharacterized protein LOC120087268 [Benincasa hispida]6.8e-7691.76Show/hide
Query:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        MTAISNSLVLT+NPQ QLS GSNL+TANK LGS+S TSLLL PGWVGK K STF+RPLSVQAAYSDGGRSSNAGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS QLRTED PNGVAVNSDEVEPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

TrEMBL top hitse value%identityAlignment
A0A1S3BV81 uncharacterized protein LOC1034938441.2e-7388.24Show/hide
Query:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        MTAISNSLVLT+NPQ QL+ GSNL+T +KRLGS+S TSL+L+PGWVGKAK STF+RPLSVQAAYSDGGRSSNAGIF+GGFVLGG+IVGTLGCVYAPQISK
Subjt:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        A+AGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS QLR ED PNGVAVNSDEVE AI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

A0A6J1FC82 uncharacterized protein LOC1114427781.2e-7388.82Show/hide
Query:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        M AISNSLV T+NPQ QLSSGSNL+TA+K LGS+S TSLLLNPGWVGKAK ST +RPLSVQAAYSDGGRSSNAGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        ALAG DRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLRT+D PNGVAVNSDE+EPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

A0A6J1FTW3 uncharacterized protein LOC1114467946.3e-7589.41Show/hide
Query:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        M+AISNSL+LT+ PQ QLS+GSNL+TA+KR GS+S T LLLNPGWVGKAK STF+RPLSVQAAYSDGGRSS+AGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        ALAG DRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLRTEDSPNGVAVNSDEVEPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

A0A6J1IGB6 uncharacterized protein LOC1114744362.9e-7287.65Show/hide
Query:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        M AISNSLV T+NPQ  LSSGSNL+TA+K LGS+S TSLLLNPGWVGKAK ST +RPLSVQAAYSD GRSSNAGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        ALAG DRK+LMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVS+QLRT+D PNGVAVNSDE+EPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

A0A6J1IT36 uncharacterized protein LOC1114803661.1e-7489.41Show/hide
Query:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK
        M+AISNSLVLT+ PQ QLS+GSNL+TA+KR GS+S T LLLNPGWVGKAK STF+RPLSVQAAYSDGGRSS+AGIF+GGFVLGGLIVGTLGCVYAPQISK
Subjt:  MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISK

Query:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI
        ALAG DRKDLMRKLPKFIYDEEKA+EKTRKVLAQKIEQLNSAIDEVS+QLRTEDSPNGVAVNSDEVEPAI
Subjt:  ALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G42960.1 expressed protein localized to the inner membrane of the chloroplast.2.4e-4260.98Show/hide
Query:  SNSLVLTENP-QFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALA
        S SL L +N  Q   SSG +L   N R  S+S      N   +   +    KR L++Q+AY D   S + G+F+GGF+LGGLIVG LGCVYAPQISKA+A
Subjt:  SNSLVLTENP-QFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALA

Query:  GADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVE
        GADRKDLMRKLPKFIYDEEKALEKTRKVLA+KI QLNSAID+VS+QL++ED+PNG A+++DE+E
Subjt:  GADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVE

AT3G02900.1 unknown protein1.1e-1032.65Show/hide
Query:  SGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADRKDLMRKLPKFIY
        SG +   A++   ++  +S L     V    N + K  LSV A Y  G +   +  F+ GF+LG  + GTL  ++APQI +++   +     +      Y
Subjt:  SGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADRKDLMRKLPKFIY

Query:  DEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEV
        DE   LE+ R++L +KI QLNSAID+VS++L+   S +    +S  V
Subjt:  DEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEV

AT3G02900.2 unknown protein3.7e-1136.7Show/hide
Query:  LSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPN
        LSV A Y  G +   +  F+ GF+LG  + GTL  ++APQI +++   +     +      YDE   LE+ R++L +KI QLNSAID+VS++L+   S +
Subjt:  LSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADRKDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPN

Query:  GVAVNSDEV
            +S  V
Subjt:  GVAVNSDEV

AT5G16660.1 unknown protein7.9e-1439.02Show/hide
Query:  LVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADR
        L L+   Q      + L T  K L S+  TS L     + K  N T  R  SV A Y DG RS ++G F+ GF+LGG + G +  ++APQI +++   + 
Subjt:  LVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADR

Query:  KDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTED---SPNGVAVNSD-EVE
        +    K  +  Y +E  LEKTR+ L +KI QLNSAID VS++LR  +   S   V V +D EVE
Subjt:  KDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTED---SPNGVAVNSD-EVE

AT5G16660.2 unknown protein1.3e-1138.41Show/hide
Query:  LVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADR
        L L+   Q      + L T  K L S+  TS L     + K  N T  R  SV A   DG RS ++G F+ GF+LGG + G +  ++APQI +++   + 
Subjt:  LVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADR

Query:  KDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTED---SPNGVAVNSD-EVE
        +    K  +  Y +E  LEKTR+ L +KI QLNSAID VS++LR  +   S   V V +D EVE
Subjt:  KDLMRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTED---SPNGVAVNSD-EVE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGCTATATCCAATTCGTTGGTTCTAACGGAAAACCCTCAATTCCAGTTATCATCTGGGTCAAATCTGCAAACTGCCAATAAACGTCTTGGGAGCATGTCTTCTAC
CAGCTTGTTACTCAATCCTGGTTGGGTGGGAAAGGCGAAAAATTCTACATTTAAGCGACCACTTTCAGTTCAAGCTGCATATAGTGATGGTGGACGGTCAAGCAATGCAG
GCATTTTTATGGGAGGTTTTGTATTGGGAGGGCTCATAGTTGGCACGCTTGGCTGTGTATATGCCCCTCAGATTAGCAAGGCACTTGCTGGAGCAGACCGAAAGGATTTG
ATGAGGAAACTTCCCAAGTTCATATATGATGAAGAAAAAGCTTTAGAGAAAACTAGAAAAGTGCTGGCTCAAAAGATTGAACAGTTGAACTCTGCCATTGATGAGGTTTC
TACTCAGCTCCGAACAGAAGATTCCCCAAATGGAGTGGCTGTGAACTCTGATGAAGTTGAACCTGCCATTTGA
mRNA sequenceShow/hide mRNA sequence
TAATAATCTGTTTTGGCCTCTCAACCGTCTGTTCTCTCCACATTCGTATTTTCTGAAACCTCATTTTCGTCTCTCTCTTTGTTACAACGCGATGACTGCTATATCCAATT
CGTTGGTTCTAACGGAAAACCCTCAATTCCAGTTATCATCTGGGTCAAATCTGCAAACTGCCAATAAACGTCTTGGGAGCATGTCTTCTACCAGCTTGTTACTCAATCCT
GGTTGGGTGGGAAAGGCGAAAAATTCTACATTTAAGCGACCACTTTCAGTTCAAGCTGCATATAGTGATGGTGGACGGTCAAGCAATGCAGGCATTTTTATGGGAGGTTT
TGTATTGGGAGGGCTCATAGTTGGCACGCTTGGCTGTGTATATGCCCCTCAGATTAGCAAGGCACTTGCTGGAGCAGACCGAAAGGATTTGATGAGGAAACTTCCCAAGT
TCATATATGATGAAGAAAAAGCTTTAGAGAAAACTAGAAAAGTGCTGGCTCAAAAGATTGAACAGTTGAACTCTGCCATTGATGAGGTTTCTACTCAGCTCCGAACAGAA
GATTCCCCAAATGGAGTGGCTGTGAACTCTGATGAAGTTGAACCTGCCATTTGAAAGCTTCATTACTCGGCTCTTCGGTCTTCATTGCCCACGATTGTGACTCAGAATAA
TAGTTTGTTCTAGCTATCGTCTTTAATTTTGTCTTAAAACATTTGGATCCGAAGTTTTTATGTGCATTACGCATCATCGCATAATGTGTTTGCTATGATCACTTAAATGC
TCCTTATAAAGTCGAATAGATTTGTAGAAGAGCATTCTTGCTGTTTCCTATTTTGGACACGAACAACAGGCAATGTTTTGTATTTGAAAGCCATATATTTCATGCCTCAT
ACCTTTTATTTGC
Protein sequenceShow/hide protein sequence
MTAISNSLVLTENPQFQLSSGSNLQTANKRLGSMSSTSLLLNPGWVGKAKNSTFKRPLSVQAAYSDGGRSSNAGIFMGGFVLGGLIVGTLGCVYAPQISKALAGADRKDL
MRKLPKFIYDEEKALEKTRKVLAQKIEQLNSAIDEVSTQLRTEDSPNGVAVNSDEVEPAI