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Sed0020346 (gene) of Chayote v1 genome

Gene IDSed0020346
OrganismSechium edule (Chayote v1)
Descriptionmitochondrial import inner membrane translocase subunit TIM22-4
Genome locationLG01:8869457..8871799
RNA-Seq ExpressionSed0020346
SyntenySed0020346
Gene Ontology termsGO:0045039 - protein insertion into mitochondrial inner membrane (biological process)
GO:0042721 - TIM22 mitochondrial import inner membrane insertion complex (cellular component)
GO:0008320 - protein transmembrane transporter activity (molecular function)
GO:0030943 - mitochondrion targeting sequence binding (molecular function)
InterPro domainsIPR039175 - Mitochondrial import inner membrane translocase subunit TIM22


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7037014.1 Mitochondrial import inner membrane translocase subunit TIM22-1 [Cucurbita argyrosperma subsp. argyrosperma]6.5e-4970.3Show/hide
Query:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK
        MAS SGDG+S DPA+SSE EKP +E IRMPT+EEIRGQDIWN+CAV SVVSGVMGGGLGLFMGL LGALDNPLMQDEMTARQQF            GSAK
Subjt:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK

Query:  AFAVMGFVFSAAECVVER---ARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA
        AFAVMGFVFSAAECVVE+   ARA  D TNT + GCVTGG++SAK     GP  + A  GC  FA
Subjt:  AFAVMGFVFSAAECVVER---ARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA

XP_008457318.1 PREDICTED: mitochondrial import inner membrane translocase subunit TIM22-4-like [Cucumis melo]3.3e-4564.2Show/hide
Query:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK
        MAS SGDG S DP  S+++E+P I  +RMPT+EEIRGQDIW++CAV SVVSGVMGGG+GLF+GL LG++DN LMQDEMTARQQF            GSAK
Subjt:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK

Query:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA
        +FAVMGF+FSAAECVVE+ARA  D TNT + GCVTGGA+SAK     GP  + A  GC  FA
Subjt:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA

XP_022154905.1 mitochondrial import inner membrane translocase subunit TIM22-4-like [Momordica charantia]1.1e-4867.9Show/hide
Query:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK
        MA+ +G+G+S DP +S+E+EKP IE IRMPT+EEIRGQDIWN+CAV SVVSGVMGGGLGLFMGL LGALDNPLMQ+EMTA+QQF            GSAK
Subjt:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK

Query:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA
        AFAVMGF+FSAAECVVE+ARA  DTTNT + GCVTGG++SAK     GP  + A  GC  FA
Subjt:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA

XP_022948292.1 mitochondrial import inner membrane translocase subunit TIM22-4 [Cucurbita moschata]1.5e-5071.6Show/hide
Query:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK
        MAS SGDG+S DPA+SSE EKP +E IRMPT+EEIRGQDIWN+CAV SVVSGVMGGGLGLFMGL LGALDNPLMQDEMTARQQF            GSAK
Subjt:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK

Query:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA
        AFAVMGFVFSAAECVVE+ARA  D TNT + GCVTGG++SAK     GP  + A  GC  FA
Subjt:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA

XP_038893922.1 mitochondrial import inner membrane translocase subunit TIM22-4-like [Benincasa hispida]6.5e-4969.14Show/hide
Query:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK
        MAS SGD +SLDP  S++SE P IE IRMPT+EEIRGQDIWN+CAV SVVSGVMGGGLGLFMGL LGALDNPLMQDEMTA+QQF            GSAK
Subjt:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK

Query:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA
        AFAVMGF+FSAAECVVE+ARA  D TNT + GCVTGG++SAK     GP  + A  GC  FA
Subjt:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA

TrEMBL top hitse value%identityAlignment
A0A1S3C5B1 mitochondrial import inner membrane translocase subunit TIM22-4-like1.6e-4564.2Show/hide
Query:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK
        MAS SGDG S DP  S+++E+P I  +RMPT+EEIRGQDIW++CAV SVVSGVMGGG+GLF+GL LG++DN LMQDEMTARQQF            GSAK
Subjt:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK

Query:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA
        +FAVMGF+FSAAECVVE+ARA  D TNT + GCVTGGA+SAK     GP  + A  GC  FA
Subjt:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA

A0A6J1DKY7 mitochondrial import inner membrane translocase subunit TIM22-4-like5.4e-4967.9Show/hide
Query:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK
        MA+ +G+G+S DP +S+E+EKP IE IRMPT+EEIRGQDIWN+CAV SVVSGVMGGGLGLFMGL LGALDNPLMQ+EMTA+QQF            GSAK
Subjt:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK

Query:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA
        AFAVMGF+FSAAECVVE+ARA  DTTNT + GCVTGG++SAK     GP  + A  GC  FA
Subjt:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA

A0A6J1G8S5 mitochondrial import inner membrane translocase subunit TIM22-47.5e-5171.6Show/hide
Query:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK
        MAS SGDG+S DPA+SSE EKP +E IRMPT+EEIRGQDIWN+CAV SVVSGVMGGGLGLFMGL LGALDNPLMQDEMTARQQF            GSAK
Subjt:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK

Query:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA
        AFAVMGFVFSAAECVVE+ARA  D TNT + GCVTGG++SAK     GP  + A  GC  FA
Subjt:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA

A0A6J1K8G7 mitochondrial import inner membrane translocase subunit TIM22-47.5e-5171.6Show/hide
Query:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK
        MAS SGDG+S DPA+SSE EKP +E IRMPT+EEIRGQDIWN+CAV SVVSGVMGGGLGLFMGL LGALDNPLMQDEMTARQQF            GSAK
Subjt:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK

Query:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA
        AFAVMGFVFSAAECVVE+ARA  D TNT + GCVTGG++SAK     GP  + A  GC  FA
Subjt:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA

D7SJS5 Uncharacterized protein3.6e-4564.81Show/hide
Query:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK
        M+S SG   + D ++S+E+EKP IE IRMPT+EEIRGQDIWN+CAV SV SGVMGGGLGL MGL LGALDNP+MQ+EMTARQQF            GSAK
Subjt:  MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAK

Query:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA
         FAVMG +FSAAECVVE+ARA  DTTNT + GCVTGGA+SAK     GP  + A  GC  FA
Subjt:  AFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA

SwissProt top hitse value%identityAlignment
A0A1D8PI78 Mitochondrial import inner membrane translocase subunit TIM223.1e-0933.33Show/hide
Query:  EKPLIEAIRMPTIEEIRGQDI--WNHCAVGSVVSGVMGGGLGLFMGLLLG--ALDNPLMQDEM------------------TARQQFGSAKAFAVMGFVF
        +KPL E  +    EE   Q I   N C   +V++GV G  LG F GL +   A D P+  D +                   A++ + SAK F  +G V+
Subjt:  EKPLIEAIRMPTIEEIRGQDI--WNHCAVGSVVSGVMGGGLGLFMGLLLG--ALDNPLMQDEM------------------TARQQFGSAKAFAVMGFVF

Query:  SAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA
        S  EC +E  RA  D  N    GC+TG  L+ +A    GP  + A  GC  FA
Subjt:  SAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA

A1XJK0 Mitochondrial import inner membrane translocase subunit TIM22-46.6e-3661.94Show/hide
Query:  MPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAKAFAVMGFVFSAAECVVERARATQDTTNT
        MPTIEEIR Q++WN+CAV +V SGVMGGGLGL MGL LGALDNP+  D MTARQQF             S K FAVMG VFSAAEC+VE+ARA  DT NT
Subjt:  MPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAKAFAVMGFVFSAAECVVERARATQDTTNT

Query:  TIVGCVTGGALSAKANTRYGPINRGANFGCLNFA
         I GCVTGG++SA    R GP  + A  GC  FA
Subjt:  TIVGCVTGGALSAKANTRYGPINRGANFGCLNFA

A2RVP7 Mitochondrial import inner membrane translocase subunit TIM22-14.1e-3858.71Show/hide
Query:  GTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAKAFAVMGF
        G S  P  S E+    I+ IRMPTIEEIR Q++WN+CAV +V SGVMGGGLGL MGL LGALDNP+  D MTARQQF             S K FAVMG 
Subjt:  GTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAKAFAVMGF

Query:  VFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA
        VFSAAEC+VE+ARA  DT NT I GCVTGG++SA    R GP  + A  GC  FA
Subjt:  VFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA

Q2UAP8 Mitochondrial import inner membrane translocase subunit tim223.1e-0931.55Show/hide
Query:  ASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGA--------------LDNPLMQDEMTARQQFG--
        A   G G  +     SE E+ +++A+                C V +V+SG MG GLG   GL + +              +D P  +      +  G  
Subjt:  ASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGA--------------LDNPLMQDEMTARQQFG--

Query:  ---SAKAFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA
           SAK F ++G ++S  EC VE  RA  D +N+ I GC+TGG L AKA    GP  + A  GC  FA
Subjt:  ---SAKAFAVMGFVFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA

Q8IN78 Mitochondrial import inner membrane translocase subunit Tim221.7e-0733.33Show/hide
Query:  IRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQD------EMTARQQF--------GSAKAFAVMGFVFSAAECVVERARATQD
        +++ T EE   +     C     ++ VMG GLG  +GL   ++ NP M D      + TAR+ F          AK FA++G VFSA EC +E  R   D
Subjt:  IRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQD------EMTARQQF--------GSAKAFAVMGFVFSAAECVVERARATQD

Query:  TTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA
          N T  G +TGG +  +A  + G I  G  F   + A
Subjt:  TTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA

Arabidopsis top hitse value%identityAlignment
AT1G18320.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein4.7e-3761.94Show/hide
Query:  MPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAKAFAVMGFVFSAAECVVERARATQDTTNT
        MPTIEEIR Q++WN+CAV +V SGVMGGGLGL MGL LGALDNP+  D MTARQQF             S K FAVMG VFSAAEC+VE+ARA  DT NT
Subjt:  MPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAKAFAVMGFVFSAAECVVERARATQDTTNT

Query:  TIVGCVTGGALSAKANTRYGPINRGANFGCLNFA
         I GCVTGG++SA    R GP  + A  GC  FA
Subjt:  TIVGCVTGGALSAKANTRYGPINRGANFGCLNFA

AT3G10110.1 Mitochondrial import inner membrane translocase subunit Tim17/Tim22/Tim23 family protein2.9e-3958.71Show/hide
Query:  GTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAKAFAVMGF
        G S  P  S E+    I+ IRMPTIEEIR Q++WN+CAV +V SGVMGGGLGL MGL LGALDNP+  D MTARQQF             S K FAVMG 
Subjt:  GTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQF------------GSAKAFAVMGF

Query:  VFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA
        VFSAAEC+VE+ARA  DT NT I GCVTGG++SA    R GP  + A  GC  FA
Subjt:  VFSAAECVVERARATQDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCCATTTCTGGAGATGGAACTTCCCTCGATCCGGCGAACTCGAGTGAGTCGGAGAAGCCTCTGATTGAGGCTATAAGAATGCCAACAATCGAAGAGATTCGCGG
CCAAGATATTTGGAACCACTGTGCAGTTGGCAGTGTTGTGAGTGGAGTCATGGGTGGTGGGCTTGGATTGTTCATGGGTTTATTATTGGGGGCATTGGATAATCCATTGA
TGCAAGATGAGATGACTGCTAGACAGCAGTTCGGTTCTGCAAAAGCGTTTGCAGTCATGGGCTTTGTTTTCTCAGCAGCAGAATGTGTTGTAGAAAGGGCTCGAGCCACA
CAAGATACAACTAATACAACAATCGTTGGTTGTGTAACTGGTGGTGCATTATCAGCTAAAGCTAACACTCGATACGGTCCAATAAACCGTGGTGCTAACTTTGGGTGCTT
AAATTTCGCCAAGGAAGACATGTGGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCCATTTCTGGAGATGGAACTTCCCTCGATCCGGCGAACTCGAGTGAGTCGGAGAAGCCTCTGATTGAGGCTATAAGAATGCCAACAATCGAAGAGATTCGCGG
CCAAGATATTTGGAACCACTGTGCAGTTGGCAGTGTTGTGAGTGGAGTCATGGGTGGTGGGCTTGGATTGTTCATGGGTTTATTATTGGGGGCATTGGATAATCCATTGA
TGCAAGATGAGATGACTGCTAGACAGCAGTTCGGTTCTGCAAAAGCGTTTGCAGTCATGGGCTTTGTTTTCTCAGCAGCAGAATGTGTTGTAGAAAGGGCTCGAGCCACA
CAAGATACAACTAATACAACAATCGTTGGTTGTGTAACTGGTGGTGCATTATCAGCTAAAGCTAACACTCGATACGGTCCAATAAACCGTGGTGCTAACTTTGGGTGCTT
AAATTTCGCCAAGGAAGACATGTGGTAG
Protein sequenceShow/hide protein sequence
MASISGDGTSLDPANSSESEKPLIEAIRMPTIEEIRGQDIWNHCAVGSVVSGVMGGGLGLFMGLLLGALDNPLMQDEMTARQQFGSAKAFAVMGFVFSAAECVVERARAT
QDTTNTTIVGCVTGGALSAKANTRYGPINRGANFGCLNFAKEDMW